RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 SLC18B1Q6NT16 456 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 CORO6Q6QEF8 472 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 DUX4L9Q6RFH8 374 aaPredicted RBP6.97□□□□□ -1.29
SMG1-216ENST00000569122 DLEU7Q6UYE1 221 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.97□□□□□ -1.29
SMG1-216ENST00000569122 TMEM219Q86XT9 240 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 CALHM1Q8IU99 346 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 FUNDC1Q8IVP5 155 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 MRPL41Q8IXM3 137 aaKnown RBP6.97□□□□□ -1.29
SMG1-216ENST00000569122 NRMQ8IXM6 262 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 C11orf53Q8IXP5 236 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 MKXQ8IYA7 352 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 MICU2Q8IYU8 434 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 FAM185AQ8N0U4 392 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 TFAP2CQ92754 450 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 PRRC1Q96M27 445 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 RAB3IPQ96QF0 476 aaPredicted RBP6.97□□□□□ -1.29
SMG1-216ENST00000569122 CGREF1Q99674 301 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 SH3GL1Q99961 368 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 MICU1Q9BPX6 476 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 FNDC11Q9BVV2 318 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 NUAK2Q9H093 628 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 KAT8Q9H7Z6 458 aaKnown RBP6.97□□□□□ -1.29
SMG1-216ENST00000569122 ABCB9Q9NP78 766 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 DUX4Q9UBX2 424 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 TMEM5Q9Y2B1 443 aa6.97□□□□□ -1.29
SMG1-216ENST00000569122 TMEM210A6NLX4 147 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 ANXA2P2A6NMY6 339 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.96□□□□□ -1.3
SMG1-216ENST00000569122 CDIPTO14735 213 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 CCDC159P0C7I6 412 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 MYCNOSP40205 109 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 GABRA2P47869 451 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 THBS3P49746 956 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 FHL1Q13642 323 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 DGUOKQ16854 277 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 AGKQ53H12 422 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 TCTEX1D4Q5JR98 221 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 EPGNQ6UW88 154 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 ZNF730Q6ZMV8 503 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 DPY19L2P2Q6ZN68 376 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 TMPRSS11FQ6ZWK6 438 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 DHDDSQ86SQ9 333 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 NAA40Q86UY6 237 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 DPP10Q8N608 796 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 OR5T2Q8NGG2 359 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 OR56B2PQ8NGI1 322 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 OR13C2Q8NGS9 318 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 OR13D1Q8NGV5 346 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 OR10A6Q8NH74 314 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 ANGPTL6Q8NI99 470 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 RCHY1Q96PM5 261 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 GPX7Q96SL4 187 aaPredicted RBP6.96□□□□□ -1.3
SMG1-216ENST00000569122 ASCL2Q99929 193 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 TLNRD1Q9H1K6 362 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 ZMAT4Q9H898 229 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 NRIP3Q9NQ35 241 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 ZFP57Q9NU63 452 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 USE1Q9NZ43 259 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 CYB5R1Q9UHQ9 305 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 SACSQ9NZJ4 4579 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 STAB2Q8WWQ8 2551 aa6.96□□□□□ -1.3
SMG1-216ENST00000569122 OR2AT4A6NND4 320 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 ANGPT2O15123 496 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 PTP4A3O75365 173 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 JTBO76095 146 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 TXNDC12O95881 172 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 RENP00797 406 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 HLA-DQA2P01906 255 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 TROVE2P10155 538 aaKnown RBP eCLIP6.95□□□□□ -1.3
SMG1-216ENST00000569122 ZNF823P16415 610 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 AMY2BP19961 511 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 COX7A1P24310 79 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 OR1E2P47887 323 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 RAB13P51153 203 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 ARHGDIBP52566 201 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 CAPZA1P52907 286 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 MTPNP58546 118 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 RPL31P62899 125 aaKnown RBP6.95□□□□□ -1.3
SMG1-216ENST00000569122 NFYCQ13952 458 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 SSX2Q16385 188 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 MEP1BQ16820 701 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 GLYATL3Q5SZD4 288 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 OTPQ5XKR4 325 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 ERICH5Q6P6B1 374 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 CFAP77Q6ZQR2 320 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 MBOAT2Q6ZWT7 520 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 CROCCP2Q86T23 111 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 LNX2Q8N448 690 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 CSNK2A3Q8NEV1 391 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 TMEM185AQ8NFB2 350 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 SLC26A10Q8NG04 563 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 GAFA1Q96PS6 74 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 ZNF649Q9BS31 505 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 CCDC28BQ9BUN5 200 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 RTL8AQ9BWD3 113 aa6.95□□□□□ -1.3
SMG1-216ENST00000569122 NSRP1Q9H0G5 558 aaKnown RBP6.95□□□□□ -1.3
SMG1-216ENST00000569122 SRA1Q9HD15 236 aaKnown RBP6.95□□□□□ -1.3
SMG1-216ENST00000569122 KRCC1Q9NPI7 259 aaPredicted RBP6.95□□□□□ -1.3
SMG1-216ENST00000569122 SNTG1Q9NSN8 517 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms