RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 TGM6O95932 706 aa12.72□□□□□ -0.37
COMMD4-221ENST00000567935 GSTT2BP0CG30 244 aa12.72□□□□□ -0.37
COMMD4-221ENST00000567935 UBBP0CG47 229 aa12.72□□□□□ -0.37
COMMD4-221ENST00000567935 PTH2RP49190 550 aa12.72□□□□□ -0.37
COMMD4-221ENST00000567935 SSBP1Q04837 148 aaKnown RBP12.72□□□□□ -0.37
COMMD4-221ENST00000567935 DYRK1AQ13627 763 aa12.72□□□□□ -0.37
COMMD4-221ENST00000567935 C11orf91Q3C1V1 193 aa12.72□□□□□ -0.37
COMMD4-221ENST00000567935 RAB12Q6IQ22 244 aa12.72□□□□□ -0.37
COMMD4-221ENST00000567935 OR2W3Q7Z3T1 314 aa12.72□□□□□ -0.37
COMMD4-221ENST00000567935 NUFIP2Q7Z417 695 aaKnown RBP12.72□□□□□ -0.37
COMMD4-221ENST00000567935 ZNF554Q86TJ5 538 aa12.72□□□□□ -0.37
COMMD4-221ENST00000567935 TOMM5Q8N4H5 51 aa12.72□□□□□ -0.37
COMMD4-221ENST00000567935 RBMXL3Q8N7X1 1067 aaKnown RBP12.72□□□□□ -0.37
COMMD4-221ENST00000567935 OR51A2Q8NGJ7 313 aa12.72□□□□□ -0.37
COMMD4-221ENST00000567935 FCAMRQ8WWV6 532 aa12.72□□□□□ -0.37
COMMD4-221ENST00000567935 AKAP1Q92667 903 aaKnown RBP eCLIP12.72□□□□□ -0.37
COMMD4-221ENST00000567935 YIPF5Q969M3 257 aa12.72□□□□□ -0.37
COMMD4-221ENST00000567935 ZFP3Q96NJ6 502 aa12.72□□□□□ -0.37
COMMD4-221ENST00000567935 RNF121Q9H920 327 aa12.72□□□□□ -0.37
COMMD4-221ENST00000567935 NPAP1Q9NZP6 1156 aa12.72□□□□□ -0.37
COMMD4-221ENST00000567935 GHRLQ9UBU3 117 aa12.72□□□□□ -0.37
COMMD4-221ENST00000567935 RAB22AQ9UL26 194 aa12.72□□□□□ -0.37
COMMD4-221ENST00000567935 MRPS7Q9Y2R9 242 aaKnown RBP12.72□□□□□ -0.37
COMMD4-221ENST00000567935 ANKHD1Q8IWZ3 2542 aaKnown RBP12.71□□□□□ -0.37
COMMD4-221ENST00000567935 TMEM272A0A1B0GTI8 110 aa12.71□□□□□ -0.37
COMMD4-221ENST00000567935 GGT3PA6NGU5 568 aa12.71□□□□□ -0.37
COMMD4-221ENST00000567935 LMX1BO60663 402 aa12.71□□□□□ -0.37
COMMD4-221ENST00000567935 CTAG2O75638 210 aa12.71□□□□□ -0.37
COMMD4-221ENST00000567935 IGHV3-9P01782 118 aa12.71□□□□□ -0.37
COMMD4-221ENST00000567935 LCATP04180 440 aa12.71□□□□□ -0.37
COMMD4-221ENST00000567935 CDK2P24941 298 aa12.71□□□□□ -0.37
COMMD4-221ENST00000567935 PTGER4P35408 488 aa12.71□□□□□ -0.37
COMMD4-221ENST00000567935 ZNF93P35789 620 aaPredicted RBP12.71□□□□□ -0.37
COMMD4-221ENST00000567935 TAS2R20P59543 309 aa12.71□□□□□ -0.37
COMMD4-221ENST00000567935 TGFBR3Q03167 851 aa12.71□□□□□ -0.37
COMMD4-221ENST00000567935 PLP2Q04941 152 aa12.71□□□□□ -0.37
COMMD4-221ENST00000567935 FAPQ12884 760 aa12.71□□□□□ -0.37
COMMD4-221ENST00000567935 MADCAM1Q13477 382 aa12.71□□□□□ -0.37
COMMD4-221ENST00000567935 PABPC1L2AQ5JQF8 200 aa12.71□□□□□ -0.37
COMMD4-221ENST00000567935 ZBTB37Q5TC79 503 aa12.71□□□□□ -0.37
COMMD4-221ENST00000567935 PLET1Q6UQ28 207 aa12.71□□□□□ -0.37
COMMD4-221ENST00000567935 DNM1P46Q6ZS02 220 aa12.71□□□□□ -0.37
COMMD4-221ENST00000567935 PNLDC1Q8NA58 520 aaKnown RBP12.71□□□□□ -0.37
COMMD4-221ENST00000567935 OR13C9Q8NGT0 318 aa12.71□□□□□ -0.37
COMMD4-221ENST00000567935 AKR7LQ8NHP1 331 aa12.71□□□□□ -0.37
COMMD4-221ENST00000567935 CHAC2Q8WUX2 184 aa12.71□□□□□ -0.37
COMMD4-221ENST00000567935 LYZL4Q96KX0 146 aa12.71□□□□□ -0.37
COMMD4-221ENST00000567935 TECTBQ96PL2 329 aa12.71□□□□□ -0.37
COMMD4-221ENST00000567935 NUDT16L1Q9BRJ7 211 aaKnown RBP12.71□□□□□ -0.37
COMMD4-221ENST00000567935 CHST5Q9GZS9 411 aa12.71□□□□□ -0.37
COMMD4-221ENST00000567935 OPA3Q9H6K4 179 aa12.71□□□□□ -0.37
COMMD4-221ENST00000567935 TAS2R8Q9NYW2 309 aa12.71□□□□□ -0.37
COMMD4-221ENST00000567935 COPZ2Q9P299 210 aa12.71□□□□□ -0.37
COMMD4-221ENST00000567935 N6AMT1Q9Y5N5 214 aa12.71□□□□□ -0.37
COMMD4-221ENST00000567935 ARHGAP21Q5T5U3 1957 aa12.7□□□□□ -0.38
COMMD4-221ENST00000567935 LINC00854A0A1B0GVQ3 168 aa12.7□□□□□ -0.38
COMMD4-221ENST00000567935 FAM240BA0A1B0GVZ2 78 aa12.7□□□□□ -0.38
COMMD4-221ENST00000567935 METTL21EPA6NDL7 271 aa12.7□□□□□ -0.38
COMMD4-221ENST00000567935 NAP1L6A6NFF2 107 aa12.7□□□□□ -0.38
COMMD4-221ENST00000567935 A6NIN4 97 aa12.7□□□□□ -0.38
COMMD4-221ENST00000567935 SULT1C2O00338 296 aa12.7□□□□□ -0.38
COMMD4-221ENST00000567935 SERPINA5P05154 406 aa12.7□□□□□ -0.38
COMMD4-221ENST00000567935 DBHP09172 617 aa12.7□□□□□ -0.38
COMMD4-221ENST00000567935 HOXB1P14653 301 aaPredicted RBP12.7□□□□□ -0.38
COMMD4-221ENST00000567935 SPNP16150 400 aa12.7□□□□□ -0.38
COMMD4-221ENST00000567935 ABOP16442 354 aa12.7□□□□□ -0.38
COMMD4-221ENST00000567935 GSK3AP49840 483 aa12.7□□□□□ -0.38
COMMD4-221ENST00000567935 RIPPLY1Q0D2K3 151 aa12.7□□□□□ -0.38
COMMD4-221ENST00000567935 GUSBP1Q15486 140 aa12.7□□□□□ -0.38
COMMD4-221ENST00000567935 FAM214BQ7L5A3 538 aa12.7□□□□□ -0.38
COMMD4-221ENST00000567935 OR5AS1Q8N127 324 aa12.7□□□□□ -0.38
COMMD4-221ENST00000567935 CISD2Q8N5K1 135 aaKnown RBP12.7□□□□□ -0.38
COMMD4-221ENST00000567935 SEMA6DQ8NFY4 1073 aa12.7□□□□□ -0.38
COMMD4-221ENST00000567935 OR52N4Q8NGI2 321 aa12.7□□□□□ -0.38
COMMD4-221ENST00000567935 OR1K1Q8NGR3 316 aa12.7□□□□□ -0.38
COMMD4-221ENST00000567935 OR6K3Q8NGY3 331 aa12.7□□□□□ -0.38
COMMD4-221ENST00000567935 SPSB1Q96BD6 273 aa12.7□□□□□ -0.38
COMMD4-221ENST00000567935 SGK3Q96BR1 496 aa12.7□□□□□ -0.38
COMMD4-221ENST00000567935 TRIB1Q96RU8 372 aa12.7□□□□□ -0.38
COMMD4-221ENST00000567935 C1QTNF5Q9BXJ0 243 aa12.7□□□□□ -0.38
COMMD4-221ENST00000567935 CGGBP1Q9UFW8 167 aaPredicted RBP12.7□□□□□ -0.38
COMMD4-221ENST00000567935 RBMX2Q9Y388 322 aaKnown RBP12.7□□□□□ -0.38
COMMD4-221ENST00000567935 RHBDD3Q9Y3P4 386 aa12.7□□□□□ -0.38
COMMD4-221ENST00000567935 CACNG2Q9Y698 323 aa12.7□□□□□ -0.38
COMMD4-221ENST00000567935 FREM1Q5H8C1 2179 aa12.7□□□□□ -0.38
COMMD4-221ENST00000567935 NIPBLQ6KC79 2804 aaeCLIP12.69□□□□□ -0.38
COMMD4-221ENST00000567935 CRHP06850 196 aa12.69□□□□□ -0.38
COMMD4-221ENST00000567935 PRKACBP22694 351 aa12.69□□□□□ -0.38
COMMD4-221ENST00000567935 ALDH3B1P43353 468 aa12.69□□□□□ -0.38
COMMD4-221ENST00000567935 DGCR2P98153 550 aa12.69□□□□□ -0.38
COMMD4-221ENST00000567935 GFOD2Q3B7J2 385 aa12.69□□□□□ -0.38
COMMD4-221ENST00000567935 SNAI3Q3KNW1 292 aa12.69□□□□□ -0.38
COMMD4-221ENST00000567935 KRTCAP3Q53RY4 240 aa12.69□□□□□ -0.38
COMMD4-221ENST00000567935 NSUN5P2Q63ZY6 315 aa12.69□□□□□ -0.38
COMMD4-221ENST00000567935 COLCA1Q6ZS62 124 aa12.69□□□□□ -0.38
COMMD4-221ENST00000567935 CDH24Q86UP0 819 aa12.69□□□□□ -0.38
COMMD4-221ENST00000567935 NAA40Q86UY6 237 aa12.69□□□□□ -0.38
COMMD4-221ENST00000567935 CADM3Q8N126 398 aa12.69□□□□□ -0.38
COMMD4-221ENST00000567935 SLC7A6Q92536 515 aa12.69□□□□□ -0.38
COMMD4-221ENST00000567935 SPSB4Q96A44 273 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms