RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 PMS2P11Q13670 270 aa11.16□□□□□ -0.62
CSPG4P13-202ENST00000567704 OR52N4Q8NGI2 321 aa11.16□□□□□ -0.62
CSPG4P13-202ENST00000567704 VAMP8Q9BV40 100 aa11.16□□□□□ -0.62
CSPG4P13-202ENST00000567704 ZFP64Q9NPA5 681 aa11.16□□□□□ -0.62
CSPG4P13-202ENST00000567704 GDE1Q9NZC3 331 aa11.16□□□□□ -0.62
CSPG4P13-202ENST00000567704 GNG12Q9UBI6 72 aa11.16□□□□□ -0.62
CSPG4P13-202ENST00000567704 HCFC2Q9Y5Z7 792 aa11.16□□□□□ -0.62
CSPG4P13-202ENST00000567704 F6UZH7 168 aa11.16□□□□□ -0.62
CSPG4P13-202ENST00000567704 GPR37O15354 613 aa11.16□□□□□ -0.62
CSPG4P13-202ENST00000567704 WDR1O75083 606 aa11.16□□□□□ -0.62
CSPG4P13-202ENST00000567704 OR2J2O76002 312 aa11.16□□□□□ -0.62
CSPG4P13-202ENST00000567704 ABHD16AO95870 558 aa11.16□□□□□ -0.62
CSPG4P13-202ENST00000567704 ONECUT2O95948 504 aa11.16□□□□□ -0.62
CSPG4P13-202ENST00000567704 CDKN2AP42771 156 aaKnown RBP11.16□□□□□ -0.62
CSPG4P13-202ENST00000567704 SULT1A1P50225 295 aa11.16□□□□□ -0.62
CSPG4P13-202ENST00000567704 DCAF12L2Q5VW00 463 aa11.16□□□□□ -0.62
CSPG4P13-202ENST00000567704 OR4A16Q8NH70 328 aa11.16□□□□□ -0.62
CSPG4P13-202ENST00000567704 WNT2BQ93097 391 aa11.16□□□□□ -0.62
CSPG4P13-202ENST00000567704 KTI12Q96EK9 354 aaPredicted RBP11.16□□□□□ -0.62
CSPG4P13-202ENST00000567704 TMPRSS13Q9BYE2 586 aa11.16□□□□□ -0.62
CSPG4P13-202ENST00000567704 IGHV3-20A0A0C4DH32 117 aa11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 MRPL33O75394 65 aaKnown RBP11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 ITGBL1O95965 494 aaPredicted RBP11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 CD1CP29017 333 aa11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 COTL1Q14019 142 aa11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 PLAC9Q5JTB6 97 aa11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 ZNF660Q6AZW8 331 aaPredicted RBP11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 RGS7BPQ6MZT1 257 aaPredicted RBP11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 CA13Q8N1Q1 262 aa11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 ARHGAP5-AS1Q96IT6 56 aa11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 ARAP2Q8WZ64 1704 aa11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 VSTM5A8MXK1 200 aa11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 HS3ST1O14792 307 aa11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 ICOSLGO75144 302 aa11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 PNLIPRP3Q17RR3 467 aa11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 C17orf78Q8N4C9 275 aa11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 BHLHE23Q8NDY6 225 aa11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 SLC37A2Q8TED4 501 aa11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 ACTR3CQ9C0K3 210 aaPredicted RBP11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 LAT2Q9GZY6 243 aa11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 IL23AQ9NPF7 189 aa11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 OBP2BQ9NPH6 170 aa11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 DVL1O14640 695 aa11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 GATCO43716 136 aaKnown RBP11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 NPBWR1P48145 328 aa11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 TM4SF4P48230 202 aa11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 FAM219AQ8IW50 185 aa11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 FAM174AQ8TBP5 190 aa11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 SLC39A7Q92504 469 aa11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 LINC00615Q96LM1 132 aaPredicted RBP11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 SHARPINQ9H0F6 387 aa11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 MMACHCQ9Y4U1 282 aa11.15□□□□□ -0.62
CSPG4P13-202ENST00000567704 H0Y8X5 98 aa11.15□□□□□ -0.63
CSPG4P13-202ENST00000567704 ALOX12BO75342 701 aa11.15□□□□□ -0.63
CSPG4P13-202ENST00000567704 CST2P09228 141 aa11.15□□□□□ -0.63
CSPG4P13-202ENST00000567704 TMIGD3P0DMS9 266 aaPredicted RBP11.15□□□□□ -0.63
CSPG4P13-202ENST00000567704 SLC25A1P53007 311 aa11.15□□□□□ -0.63
CSPG4P13-202ENST00000567704 SCAND1P57086 179 aa11.15□□□□□ -0.63
CSPG4P13-202ENST00000567704 RGP1Q92546 391 aaPredicted RBP11.15□□□□□ -0.63
CSPG4P13-202ENST00000567704 HIPK2Q9H2X6 1198 aa11.15□□□□□ -0.63
CSPG4P13-202ENST00000567704 PTRH2Q9Y3E5 179 aaKnown RBP11.15□□□□□ -0.63
CSPG4P13-202ENST00000567704 POMT1Q9Y6A1 747 aa11.15□□□□□ -0.63
CSPG4P13-202ENST00000567704 A0A1W2PNR3 127 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 A0A1W2PNV4 684 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 FIGNL2A6NMB9 653 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 M0R143 59 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 ANGPTL7O43827 346 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 YIF1AO95070 293 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 MMP7P09237 267 aaPredicted RBP11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 PPICP45877 212 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 THBS3P49746 956 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 ZNF813Q6ZN06 617 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 OR4C3Q8NH37 302 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 MS4A10Q96PG2 267 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 THAP10Q9P2Z0 257 aaPredicted RBP11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 PPP1R3CQ9UQK1 317 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 ABCD4O14678 606 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 TIMP1P01033 207 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 GDF1P27539 372 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 CD200P41217 278 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 HNRNPA3P51991 378 aaKnown RBP11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 YPEL5P62699 121 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 RANP62826 216 aaKnown RBP11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 AARDQ4LEZ3 155 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 OR2B11Q5JQS5 317 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 Q6ZNB5 142 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 Q7L0L9 218 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 UBE3DQ7Z6J8 389 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 CCL4L1Q8NHW4 92 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 SNX22Q96L94 193 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 PACRGQ96M98 296 aaPredicted RBP11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 UBL7Q96S82 380 aaPredicted RBP11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 CDK5RAP2Q96SN8 1893 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 SERPINE3A8MV23 424 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 M0R135 149 aa11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 HOXD4P09016 255 aaPredicted RBP11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 ZNF121P58317 390 aaPredicted RBP11.14□□□□□ -0.63
CSPG4P13-202ENST00000567704 OR4C5Q8NGB2 326 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms