RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 HSMCR30P0CW71 290 aa9.78□□□□□ -0.84
KARS-207ENST00000566560 ATP6V1B1P15313 513 aa9.78□□□□□ -0.84
KARS-207ENST00000566560 ACKR3P25106 362 aa9.78□□□□□ -0.84
KARS-207ENST00000566560 LIPAP38571 399 aa9.78□□□□□ -0.84
KARS-207ENST00000566560 DDOSTP39656 456 aa9.78□□□□□ -0.84
KARS-207ENST00000566560 SLC3A1Q07837 685 aa9.78□□□□□ -0.84
KARS-207ENST00000566560 TMEM244Q5VVB8 128 aa9.78□□□□□ -0.84
KARS-207ENST00000566560 C1orf229Q6ZS94 237 aaPredicted RBP9.78□□□□□ -0.84
KARS-207ENST00000566560 RDH10Q8IZV5 341 aa9.78□□□□□ -0.84
KARS-207ENST00000566560 CSNK2A3Q8NEV1 391 aa9.78□□□□□ -0.84
KARS-207ENST00000566560 SEMA6DQ8NFY4 1073 aa9.78□□□□□ -0.84
KARS-207ENST00000566560 OR8G5Q8NG78 346 aa9.78□□□□□ -0.84
KARS-207ENST00000566560 OR10AD1Q8NGE0 317 aa9.78□□□□□ -0.84
KARS-207ENST00000566560 EDARADDQ8WWZ3 215 aa9.78□□□□□ -0.84
KARS-207ENST00000566560 NINJ1Q92982 152 aa9.78□□□□□ -0.84
KARS-207ENST00000566560 VRK1Q99986 396 aaPredicted RBP9.78□□□□□ -0.84
KARS-207ENST00000566560 PDCD1LG2Q9BQ51 273 aa9.78□□□□□ -0.84
KARS-207ENST00000566560 ADAT1Q9BUB4 502 aaKnown RBP9.78□□□□□ -0.84
KARS-207ENST00000566560 MS4A5Q9H3V2 200 aa9.78□□□□□ -0.84
KARS-207ENST00000566560 ZNF696Q9H7X3 374 aa9.78□□□□□ -0.84
KARS-207ENST00000566560 ACOT13Q9NPJ3 140 aa9.78□□□□□ -0.84
KARS-207ENST00000566560 MRPL15Q9P015 296 aaKnown RBP9.78□□□□□ -0.84
KARS-207ENST00000566560 HHLA2Q9UM44 414 aa9.78□□□□□ -0.84
KARS-207ENST00000566560 ITPR2Q14571 2701 aa9.77□□□□□ -0.84
KARS-207ENST00000566560 CCDC168Q8NDH2 2452 aa9.77□□□□□ -0.85
KARS-207ENST00000566560 CHD3Q12873 2000 aaKnown RBP9.77□□□□□ -0.85
KARS-207ENST00000566560 ZNF816-ZNF321PA0A0X1KG74 233 aa9.77□□□□□ -0.85
KARS-207ENST00000566560 LOC390937A0A1W2PQ73 354 aa9.77□□□□□ -0.85
KARS-207ENST00000566560 OVOL3O00110 214 aa9.77□□□□□ -0.85
KARS-207ENST00000566560 ISG15P05161 165 aa9.77□□□□□ -0.85
KARS-207ENST00000566560 FAHP16930 419 aa9.77□□□□□ -0.85
KARS-207ENST00000566560 ZNF12P17014 697 aa9.77□□□□□ -0.85
KARS-207ENST00000566560 GNALP38405 381 aa9.77□□□□□ -0.85
KARS-207ENST00000566560 EMX1Q04741 257 aaPredicted RBP9.77□□□□□ -0.85
KARS-207ENST00000566560 ACSM1Q08AH1 577 aa9.77□□□□□ -0.85
KARS-207ENST00000566560 MLLT11Q13015 90 aaPredicted RBP9.77□□□□□ -0.85
KARS-207ENST00000566560 TNK1Q13470 666 aa9.77□□□□□ -0.85
KARS-207ENST00000566560 DMKNQ6E0U4 476 aaPredicted RBP9.77□□□□□ -0.85
KARS-207ENST00000566560 Q6ZR03 302 aa9.77□□□□□ -0.85
KARS-207ENST00000566560 SPARTQ8N0X7 666 aa9.77□□□□□ -0.85
KARS-207ENST00000566560 CCDC54Q8NEL0 328 aa9.77□□□□□ -0.85
KARS-207ENST00000566560 OR2Z1Q8NG97 314 aa9.77□□□□□ -0.85
KARS-207ENST00000566560 OR51A4Q8NGJ6 313 aa9.77□□□□□ -0.85
KARS-207ENST00000566560 OR14K1Q8NGZ2 314 aa9.77□□□□□ -0.85
KARS-207ENST00000566560 OR10AC1Q8NH08 325 aa9.77□□□□□ -0.85
KARS-207ENST00000566560 TSEN15Q8WW01 171 aaKnown RBP9.77□□□□□ -0.85
KARS-207ENST00000566560 FCGR1BQ92637 280 aa9.77□□□□□ -0.85
KARS-207ENST00000566560 UFD1Q92890 307 aa9.77□□□□□ -0.85
KARS-207ENST00000566560 DVL3Q92997 716 aaPredicted RBP9.77□□□□□ -0.85
KARS-207ENST00000566560 ELMOD3Q96FG2 381 aa9.77□□□□□ -0.85
KARS-207ENST00000566560 PGLYRP3Q96LB9 341 aa9.77□□□□□ -0.85
KARS-207ENST00000566560 SORCS2Q96PQ0 1159 aa9.77□□□□□ -0.85
KARS-207ENST00000566560 NR1H4Q96RI1 486 aaPredicted RBP9.77□□□□□ -0.85
KARS-207ENST00000566560 SLC30A2Q9BRI3 323 aa9.77□□□□□ -0.85
KARS-207ENST00000566560 SLC22A4Q9H015 551 aa9.77□□□□□ -0.85
KARS-207ENST00000566560 RAB1BQ9H0U4 201 aa9.77□□□□□ -0.85
KARS-207ENST00000566560 BEX4Q9NWD9 120 aaPredicted RBP9.77□□□□□ -0.85
KARS-207ENST00000566560 ENPP5Q9UJA9 477 aa9.77□□□□□ -0.85
KARS-207ENST00000566560 PIGLQ9Y2B2 252 aa9.77□□□□□ -0.85
KARS-207ENST00000566560 SIRT4Q9Y6E7 314 aaPredicted RBP9.77□□□□□ -0.85
KARS-207ENST00000566560 V9GYS6 101 aa9.77□□□□□ -0.85
KARS-207ENST00000566560 TANC2Q9HCD6 1990 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 DHRS7CA6NNS2 312 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 EREGO14944 169 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 OGG1O15527 345 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 MLNRO43193 412 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 TPD52L2O43399 206 aaKnown RBP9.76□□□□□ -0.85
KARS-207ENST00000566560 IGHV1-46P01743 117 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 RPSAP08865 295 aaKnown RBP9.76□□□□□ -0.85
KARS-207ENST00000566560 CELP19835 753 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 CA6P23280 308 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 TNFSF4P23510 183 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 MAGEB1P43366 347 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 PTH2RP49190 550 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 TNFAIP6P98066 277 aaPredicted RBP9.76□□□□□ -0.85
KARS-207ENST00000566560 TAGLNQ01995 201 aaKnown RBP9.76□□□□□ -0.85
KARS-207ENST00000566560 RIPPLY1Q0D2K3 151 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 OR8G1Q15617 311 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 TSTQ16762 297 aaKnown RBP9.76□□□□□ -0.85
KARS-207ENST00000566560 DEFB113Q30KQ7 82 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 PCGF3Q3KNV8 242 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 ZBTB37Q5TC79 503 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 ZCCHC24Q8N2G6 241 aaKnown RBP9.76□□□□□ -0.85
KARS-207ENST00000566560 TSPAN14Q8NG11 270 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 OR13C3Q8NGS6 347 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 OR13C5Q8NGS8 318 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 OR13G1Q8NGZ3 307 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 UBASH3BQ8TF42 649 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 RGP1Q92546 391 aaPredicted RBP9.76□□□□□ -0.85
KARS-207ENST00000566560 ITFG2Q969R8 447 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 TRMT61AQ96FX7 289 aaKnown RBP9.76□□□□□ -0.85
KARS-207ENST00000566560 PERPQ96FX8 193 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 OPALINQ96PE5 141 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 DIRC2Q96SL1 478 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 MGLLQ99685 303 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 VCX3AQ9NNX9 186 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 TMEM100Q9NV29 134 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 ZDHHC8Q9ULC8 765 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 DHDHQ9UQ10 334 aa9.76□□□□□ -0.85
KARS-207ENST00000566560 ZNF281Q9Y2X9 895 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms