RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 ACSF3Q4G176 576 aaPredicted RBP5.62□□□□□ -1.51
PTPN9-204ENST00000564970 PKDCCQ504Y2 493 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 SPIN3Q5JUX0 258 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 ZNF506Q5JVG8 444 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 ACTL10Q5JWF8 245 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 RNFT1Q5M7Z0 435 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 ATXN7L2Q5T6C5 722 aaPredicted RBP5.62□□□□□ -1.51
PTPN9-204ENST00000564970 GPR157Q5UAW9 335 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 SLC8B1Q6J4K2 584 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 PWWP2BQ6NUJ5 590 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 ZNF562Q6V9R5 426 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 LCNL1Q6ZST4 164 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 CHST9Q7L1S5 443 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 LRRC70Q7Z2Q7 622 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 SCD5Q86SK9 330 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 ZNF429Q86V71 674 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 LINC00346Q8IVM7 164 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 CMTM8Q8IZV2 173 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 BMPERQ8N8U9 685 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 CSNK2A3Q8NEV1 391 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 OR5AU1Q8NGC0 362 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 PTPMT1Q8WUK0 201 aaPredicted RBP5.62□□□□□ -1.51
PTPN9-204ENST00000564970 AQP3Q92482 292 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 SMPDL3BQ92485 455 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 PTX4Q96A99 478 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 ESAMQ96AP7 390 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 APH1AQ96BI3 265 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 ANAPC16Q96DE5 110 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 SLC25A38Q96DW6 304 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 ZMYND19Q96E35 227 aaPredicted RBP5.62□□□□□ -1.51
PTPN9-204ENST00000564970 HPDLQ96IR7 371 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 THOC3Q96J01 351 aaKnown RBP5.62□□□□□ -1.51
PTPN9-204ENST00000564970 CAPNS2Q96L46 248 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 GNRHR2Q96P88 292 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 YPEL2Q96QA6 119 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 NICN1Q9BSH3 213 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 DUSP23Q9BVJ7 150 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 FNDC11Q9BVV2 318 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 TPPP3Q9BW30 176 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 RAB11FIP5Q9BXF6 653 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 SLC25A51Q9H1U9 297 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 METTL7AQ9H8H3 244 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 TUBG2Q9NRH3 451 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 WRAP73Q9P2S5 460 aaPredicted RBP5.62□□□□□ -1.51
PTPN9-204ENST00000564970 GALPQ9UBC7 116 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 KLK11Q9UBX7 282 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 SLC23A2Q9UGH3 650 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 FBXW2Q9UKT8 454 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 V9GY05 133 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 SIP14410 1827 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 TSC2P49815 1807 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 ANKRD36A6QL64 1941 aa5.62□□□□□ -1.51
PTPN9-204ENST00000564970 GREB1LQ9C091 1923 aaPredicted RBP5.62□□□□□ -1.51
PTPN9-204ENST00000564970 TRAV9-1A0A075B6T8 112 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 IGHV2-26A0A0B4J1V2 119 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 TRAV1-1A0A0B4J248 108 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 DAPL1A0PJW8 107 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 GAGE12BA1L429 117 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 TMEM213A2RRL7 107 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 ZNF860A6NHJ4 632 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 PRR33A8MZF0 331 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 C17orf105B2RV13 164 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 M0QZ24 198 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 M0R129 80 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 HSD17B6O14756 317 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 HMGB3O15347 200 aaKnown RBP5.61□□□□□ -1.51
PTPN9-204ENST00000564970 FGF10O15520 208 aaPredicted RBP5.61□□□□□ -1.51
PTPN9-204ENST00000564970 FCMRO60667 390 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 PPP1R3DO95685 299 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 IGHG4P01861 327 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 MBPP02686 304 aaPredicted RBP5.61□□□□□ -1.51
PTPN9-204ENST00000564970 SMIM10L1P0DMW3 83 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 ALPPL2P10696 532 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 KITLGP21583 273 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 GCH1P30793 250 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 OR1D2P34982 312 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 AQP2P41181 271 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 FLT3LGP49771 235 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 RAB9AP51151 201 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 CRYBA2P53672 197 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 PNLIPRP1P54315 467 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 MTCP1P56278 107 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 FOXL2P58012 376 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 OR12D2P58182 307 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 ELOCQ15369 112 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 CEACAM21Q3KPI0 293 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 ARHGAP11BQ3KRB8 267 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 PARP14Q460N5 1801 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 TMEM240Q5SV17 173 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 TPTE2P1Q5T6R2 138 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 AADACL3Q5VUY0 350 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 FAAP20Q6NZ36 180 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 KCNIP4Q6PIL6 250 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 TMEM220Q6QAJ8 160 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 C12orf54Q6X4T0 127 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 ZNF66Q6ZN08 573 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 SYT13Q7L8C5 426 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 PRSS45Q7RTY3 260 aa5.61□□□□□ -1.51
PTPN9-204ENST00000564970 CENPVQ7Z7K6 275 aaPredicted RBP5.61□□□□□ -1.51
PTPN9-204ENST00000564970 TUSC5Q8IXB3 177 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms