RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 HAO2Q9NYQ3 351 aa5.92□□□□□ -1.46
VPS4A-203ENST00000564399 B9D1Q9UPM9 204 aa5.92□□□□□ -1.46
VPS4A-203ENST00000564399 SORL1Q92673 2214 aa5.92□□□□□ -1.46
VPS4A-203ENST00000564399 RYR2Q92736 4967 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 A0A087WUU8 490 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 J3KTA2 159 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 F2RL2O00254 374 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 DCTN6O00399 190 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 CDIPTO14735 213 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 SYNGR1O43759 233 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 TFF1P04155 84 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 CHRM2P08172 466 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 CCDC159P0C7I6 412 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 COX7A1P24310 79 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 GNALP38405 381 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 GABRA2P47869 451 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 GZMMP51124 257 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 RPS6KA3P51812 740 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 SLC7A2P52569 658 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 DGUOKQ16854 277 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 TNFAIP8L3Q5GJ75 292 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 GLYATL3Q5SZD4 288 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 ATPAF1Q5TC12 328 aaPredicted RBP5.91□□□□□ -1.46
VPS4A-203ENST00000564399 STUMQ69YW2 141 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 ZNF788Q6ZQV5 615 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 TMPRSS11FQ6ZWK6 438 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 MBOAT2Q6ZWT7 520 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 CENPVQ7Z7K6 275 aaPredicted RBP5.91□□□□□ -1.46
VPS4A-203ENST00000564399 WDR86Q86TI4 376 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 MKXQ8IYA7 352 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 OFCC1Q8IZS5 231 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 OR6V1Q8N148 313 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 MREGQ8N565 214 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 SDR9C7Q8NEX9 313 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 SLC26A10Q8NG04 563 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 RPS4Y2Q8TD47 263 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 GAFA1Q96PS6 74 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 DNTTIP1Q9H147 329 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 WDR13Q9H1Z4 485 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 ELL3Q9HB65 397 aaPredicted RBP5.91□□□□□ -1.46
VPS4A-203ENST00000564399 INPP5EQ9NRR6 644 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 PITPNC1Q9UKF7 332 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 TCF19Q9Y242 345 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 TSSC4Q9Y5U2 329 aaPredicted RBP5.91□□□□□ -1.46
VPS4A-203ENST00000564399 SNX13Q9Y5W8 968 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 DNAH9Q9NYC9 4486 aa5.91□□□□□ -1.46
VPS4A-203ENST00000564399 IGLV1-36A0A0B4J1U3 117 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 A6NDX4 124 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 SIGLEC5O15389 551 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 TBX1O43435 398 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 PTP4A3O75365 173 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 TIPRLO75663 272 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 RENP00797 406 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 IFNW1P05000 195 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 SLC2A1P11166 492 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 ZNF823P16415 610 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 ANOS1P23352 680 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 DDOSTP39656 456 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 PRKXP51817 358 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 CAPZA1P52907 286 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 CAV3P56539 151 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 BLCAPP62952 87 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 CYLC2Q14093 348 aaPredicted RBP5.9□□□□□ -1.46
VPS4A-203ENST00000564399 TAF13Q15543 124 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 CASC10Q5T4H9 136 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 NANOGP8Q6NSW7 305 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 ERICH5Q6P6B1 374 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 DRAM2Q6UX65 266 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 UNQ9370/PRO34162Q6UXP9 181 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 DPY19L2P2Q6ZN68 376 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 Q6ZS46 218 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 LHFPL4Q7Z7J7 247 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 CROCCP2Q86T23 111 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 TMEM185AQ8NFB2 350 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 MUC7Q8TAX7 377 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 FAM46AQ96IP4 442 aaKnown RBP5.9□□□□□ -1.46
VPS4A-203ENST00000564399 C7orf26Q96N11 449 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 ERMAPQ96PL5 475 aaPredicted RBP5.9□□□□□ -1.46
VPS4A-203ENST00000564399 RAB3IPQ96QF0 476 aaPredicted RBP5.9□□□□□ -1.46
VPS4A-203ENST00000564399 SH3GL1Q99961 368 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 TMEM120AQ9BXJ8 343 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 OPA3Q9H6K4 179 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 PNRC2Q9NPJ4 139 aaKnown RBP5.9□□□□□ -1.46
VPS4A-203ENST00000564399 RPRD1BQ9NQG5 326 aaKnown RBP5.9□□□□□ -1.46
VPS4A-203ENST00000564399 GAR1Q9NY12 217 aaKnown RBP5.9□□□□□ -1.46
VPS4A-203ENST00000564399 CYB5R1Q9UHQ9 305 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 SIGLEC7Q9Y286 467 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 TMEM5Q9Y2B1 443 aa5.9□□□□□ -1.46
VPS4A-203ENST00000564399 hCG_1809904A0A1W2PP81 198 aa5.89□□□□□ -1.47
VPS4A-203ENST00000564399 A0A1W2PPE2 198 aa5.89□□□□□ -1.47
VPS4A-203ENST00000564399 A0A1W2PPH5 198 aa5.89□□□□□ -1.47
VPS4A-203ENST00000564399 A0A1W2PR64 198 aa5.89□□□□□ -1.47
VPS4A-203ENST00000564399 A0A1W2PRV1 198 aa5.89□□□□□ -1.47
VPS4A-203ENST00000564399 ANXA2P2A6NMY6 339 aa5.89□□□□□ -1.47
VPS4A-203ENST00000564399 VGLL3A8MV65 326 aa5.89□□□□□ -1.47
VPS4A-203ENST00000564399 H3BUI4 141 aa5.89□□□□□ -1.47
VPS4A-203ENST00000564399 FFAR1O14842 300 aa5.89□□□□□ -1.47
VPS4A-203ENST00000564399 AKR7A2O43488 359 aa5.89□□□□□ -1.47
VPS4A-203ENST00000564399 XRCC2O43543 280 aa5.89□□□□□ -1.47
VPS4A-203ENST00000564399 TXNDC12O95881 172 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms