RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 KRTAP24-1Q3LI83 254 aa25.7■■□□□ 1.7
CMTM4-204ENST00000563952 LIPNQ5VXI9 398 aa25.7■■□□□ 1.7
CMTM4-204ENST00000563952 DCDC5Q6ZRR9 648 aa25.7■■□□□ 1.7
CMTM4-204ENST00000563952 WDR86Q86TI4 376 aa25.7■■□□□ 1.7
CMTM4-204ENST00000563952 PHC2Q8IXK0 858 aa25.7■■□□□ 1.7
CMTM4-204ENST00000563952 OR51G2Q8NGK0 314 aa25.7■■□□□ 1.7
CMTM4-204ENST00000563952 NANPQ8TBE9 248 aa25.7■■□□□ 1.7
CMTM4-204ENST00000563952 ZNF391Q9UJN7 358 aa25.7■■□□□ 1.7
CMTM4-204ENST00000563952 ORC6Q9Y5N6 252 aa25.7■■□□□ 1.7
CMTM4-204ENST00000563952 C3orf80F5H4A9 247 aa25.69■■□□□ 1.7
CMTM4-204ENST00000563952 PITPNBP48739 271 aa25.69■■□□□ 1.7
CMTM4-204ENST00000563952 ZNF829Q3KNS6 432 aaPredicted RBP25.69■■□□□ 1.7
CMTM4-204ENST00000563952 ZNF322Q6U7Q0 402 aaPredicted RBP25.69■■□□□ 1.7
CMTM4-204ENST00000563952 COMMD2Q86X83 199 aa25.69■■□□□ 1.7
CMTM4-204ENST00000563952 FAM81AQ8TBF8 368 aa25.69■■□□□ 1.7
CMTM4-204ENST00000563952 MNTQ99583 582 aa25.69■■□□□ 1.7
CMTM4-204ENST00000563952 APOL4Q9BPW4 351 aa25.69■■□□□ 1.7
CMTM4-204ENST00000563952 PBOV1Q9GZY1 135 aa25.69■■□□□ 1.7
CMTM4-204ENST00000563952 ACOD1A6NK06 481 aa25.68■■□□□ 1.7
CMTM4-204ENST00000563952 ANXA2P2A6NMY6 339 aa25.68■■□□□ 1.7
CMTM4-204ENST00000563952 ZNF850A8MQ14 1090 aa25.68■■□□□ 1.7
CMTM4-204ENST00000563952 ZNF670-ZNF695F2Z2N8 137 aa25.68■■□□□ 1.7
CMTM4-204ENST00000563952 LGALS8O00214 317 aa25.68■■□□□ 1.7
CMTM4-204ENST00000563952 EI24O14681 340 aa25.68■■□□□ 1.7
CMTM4-204ENST00000563952 PHYHO14832 338 aa25.68■■□□□ 1.7
CMTM4-204ENST00000563952 MAGEB4O15481 346 aaPredicted RBP25.68■■□□□ 1.7
CMTM4-204ENST00000563952 ZNF12P17014 697 aa25.68■■□□□ 1.7
CMTM4-204ENST00000563952 EPHA1P21709 976 aa25.68■■□□□ 1.7
CMTM4-204ENST00000563952 ZNF154Q13106 437 aa25.68■■□□□ 1.7
CMTM4-204ENST00000563952 PRDX4Q13162 271 aa25.68■■□□□ 1.7
CMTM4-204ENST00000563952 OR1M1Q8NGA1 313 aa25.68■■□□□ 1.7
CMTM4-204ENST00000563952 PIGCQ92535 297 aa25.68■■□□□ 1.7
CMTM4-204ENST00000563952 MICU1Q9BPX6 476 aa25.68■■□□□ 1.7
CMTM4-204ENST00000563952 CLN6Q9NWW5 311 aa25.68■■□□□ 1.7
CMTM4-204ENST00000563952 HAO2Q9NYQ3 351 aa25.68■■□□□ 1.7
CMTM4-204ENST00000563952 WARS2Q9UGM6 360 aaKnown RBP25.68■■□□□ 1.7
CMTM4-204ENST00000563952 GTF2A1LQ9UNN4 478 aa25.68■■□□□ 1.7
CMTM4-204ENST00000563952 INSIG2Q9Y5U4 225 aa25.68■■□□□ 1.7
CMTM4-204ENST00000563952 RGS9O75916 674 aaPredicted RBP25.67■■□□□ 1.7
CMTM4-204ENST00000563952 ALPLP05186 524 aa25.67■■□□□ 1.7
CMTM4-204ENST00000563952 DCTDP32321 178 aa25.67■■□□□ 1.7
CMTM4-204ENST00000563952 CSNK2BP67870 215 aa25.67■■□□□ 1.7
CMTM4-204ENST00000563952 IL5RAQ01344 420 aa25.67■■□□□ 1.7
CMTM4-204ENST00000563952 MFGE8Q08431 387 aaPredicted RBP25.67■■□□□ 1.7
CMTM4-204ENST00000563952 C10orf67Q8IYJ2 551 aa25.67■■□□□ 1.7
CMTM4-204ENST00000563952 OR8J1Q8NGP2 316 aa25.67■■□□□ 1.7
CMTM4-204ENST00000563952 SPATA3Q8NHX4 192 aa25.67■■□□□ 1.7
CMTM4-204ENST00000563952 ITPKCQ96DU7 683 aa25.67■■□□□ 1.7
CMTM4-204ENST00000563952 TBX5Q99593 518 aa25.67■■□□□ 1.7
CMTM4-204ENST00000563952 MPC1Q9Y5U8 109 aa25.67■■□□□ 1.7
CMTM4-204ENST00000563952 A0A0U1RQV5 110 aa25.66■■□□□ 1.7
CMTM4-204ENST00000563952 APOL3O95236 402 aa25.66■■□□□ 1.7
CMTM4-204ENST00000563952 CST4P01036 141 aa25.66■■□□□ 1.7
CMTM4-204ENST00000563952 HTR1FP30939 366 aa25.66■■□□□ 1.7
CMTM4-204ENST00000563952 CDC42P60953 191 aa25.66■■□□□ 1.7
CMTM4-204ENST00000563952 KCNJ8Q15842 424 aa25.66■■□□□ 1.7
CMTM4-204ENST00000563952 C11orf53Q8IXP5 236 aa25.66■■□□□ 1.7
CMTM4-204ENST00000563952 GCSAMQ8N6F7 178 aa25.66■■□□□ 1.7
CMTM4-204ENST00000563952 LRRC29Q8WV35 223 aa25.66■■□□□ 1.7
CMTM4-204ENST00000563952 PPP1R14AQ96A00 147 aa25.66■■□□□ 1.7
CMTM4-204ENST00000563952 RAB3IPQ96QF0 476 aaPredicted RBP25.66■■□□□ 1.7
CMTM4-204ENST00000563952 MRI1Q9BV20 369 aa25.66■■□□□ 1.7
CMTM4-204ENST00000563952 RTL8AQ9BWD3 113 aa25.66■■□□□ 1.7
CMTM4-204ENST00000563952 CLN8Q9UBY8 286 aa25.66■■□□□ 1.7
CMTM4-204ENST00000563952 AUP1Q9Y679 476 aa25.66■■□□□ 1.7
CMTM4-204ENST00000563952 TRAV38-1A0A0B4J264 116 aa25.65■■□□□ 1.7
CMTM4-204ENST00000563952 OOEPA6NGQ2 149 aa25.65■■□□□ 1.7
CMTM4-204ENST00000563952 EGR1P18146 543 aa25.65■■□□□ 1.7
CMTM4-204ENST00000563952 ZIK1Q3SY52 487 aaPredicted RBP25.65■■□□□ 1.7
CMTM4-204ENST00000563952 PLEKHG7Q6ZR37 379 aa25.65■■□□□ 1.7
CMTM4-204ENST00000563952 GALNT4Q8N4A0 578 aa25.65■■□□□ 1.7
CMTM4-204ENST00000563952 OR51E1Q8TCB6 317 aa25.65■■□□□ 1.7
CMTM4-204ENST00000563952 FAM71F1Q96KD3 344 aaPredicted RBP25.65■■□□□ 1.7
CMTM4-204ENST00000563952 IMPAD1Q9NX62 359 aa25.65■■□□□ 1.7
CMTM4-204ENST00000563952 USE1Q9NZ43 259 aa25.65■■□□□ 1.7
CMTM4-204ENST00000563952 MAP2K3P46734 347 aa25.64■■□□□ 1.7
CMTM4-204ENST00000563952 ALDH3A2P51648 485 aa25.64■■□□□ 1.7
CMTM4-204ENST00000563952 POU4F2Q12837 409 aa25.64■■□□□ 1.7
CMTM4-204ENST00000563952 KCTD8Q6ZWB6 473 aa25.64■■□□□ 1.7
CMTM4-204ENST00000563952 CBR4Q8N4T8 237 aa25.64■■□□□ 1.7
CMTM4-204ENST00000563952 OR5P3Q8WZ94 311 aa25.64■■□□□ 1.7
CMTM4-204ENST00000563952 ABCB9Q9NP78 766 aa25.64■■□□□ 1.7
CMTM4-204ENST00000563952 TRIM36Q9NQ86 728 aa25.64■■□□□ 1.7
CMTM4-204ENST00000563952 GPR84Q9NQS5 396 aa25.64■■□□□ 1.7
CMTM4-204ENST00000563952 NUFIP1Q9UHK0 495 aaKnown RBP25.64■■□□□ 1.7
CMTM4-204ENST00000563952 IGHV3OR15-7A0A075B7D8 119 aa25.63■■□□□ 1.69
CMTM4-204ENST00000563952 LOC110117498-PIK3R3F6TDL0 507 aa25.63■■□□□ 1.69
CMTM4-204ENST00000563952 LHBP01229 141 aa25.63■■□□□ 1.69
CMTM4-204ENST00000563952 GYPAP02724 150 aa25.63■■□□□ 1.69
CMTM4-204ENST00000563952 ATP6V1E1P36543 226 aa25.63■■□□□ 1.69
CMTM4-204ENST00000563952 PSMB10P40306 273 aa25.63■■□□□ 1.69
CMTM4-204ENST00000563952 EGR3Q06889 387 aa25.63■■□□□ 1.69
CMTM4-204ENST00000563952 ARMCX4Q5H9R4 360 aa25.63■■□□□ 1.69
CMTM4-204ENST00000563952 WDR25Q64LD2 544 aaPredicted RBP25.63■■□□□ 1.69
CMTM4-204ENST00000563952 BTNL3Q6UXE8 466 aa25.63■■□□□ 1.69
CMTM4-204ENST00000563952 SSX6Q7RTT6 188 aa25.63■■□□□ 1.69
CMTM4-204ENST00000563952 ZDHHC23Q8IYP9 409 aa25.63■■□□□ 1.69
CMTM4-204ENST00000563952 EME1Q96AY2 570 aa25.63■■□□□ 1.69
CMTM4-204ENST00000563952 TECTBQ96PL2 329 aa25.63■■□□□ 1.69
CMTM4-204ENST00000563952 C19orf24Q9BVV8 132 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms