RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 CMBLQ96DG6 245 aa8.73□□□□□ -1.01
SMG1-208ENST00000563448 MARS2Q96GW9 593 aaKnown RBP8.73□□□□□ -1.01
SMG1-208ENST00000563448 NKX3-1Q99801 234 aaPredicted RBP8.73□□□□□ -1.01
SMG1-208ENST00000563448 BCL2L14Q9BZR8 327 aa8.73□□□□□ -1.01
SMG1-208ENST00000563448 C6orf62Q9GZU0 229 aaPredicted RBP8.73□□□□□ -1.01
SMG1-208ENST00000563448 SMURF1Q9HCE7 757 aa8.73□□□□□ -1.01
SMG1-208ENST00000563448 GPR173Q9NS66 373 aa8.73□□□□□ -1.01
SMG1-208ENST00000563448 CFAP46Q8IYW2 2715 aa8.73□□□□□ -1.01
SMG1-208ENST00000563448 MEGF11A6BM72 1044 aa8.73□□□□□ -1.01
SMG1-208ENST00000563448 IFITM5A6NNB3 132 aa8.73□□□□□ -1.01
SMG1-208ENST00000563448 CTDSP2O14595 271 aa8.73□□□□□ -1.01
SMG1-208ENST00000563448 GMDSO60547 372 aa8.73□□□□□ -1.01
SMG1-208ENST00000563448 MPV17P39210 176 aa8.73□□□□□ -1.01
SMG1-208ENST00000563448 BMXP51813 675 aa8.73□□□□□ -1.01
SMG1-208ENST00000563448 SORDQ00796 357 aa8.73□□□□□ -1.01
SMG1-208ENST00000563448 CLVS2Q5SYC1 327 aa8.73□□□□□ -1.01
SMG1-208ENST00000563448 OR2T2Q6IF00 324 aa8.73□□□□□ -1.01
SMG1-208ENST00000563448 TMEM108Q6UXF1 575 aa8.73□□□□□ -1.01
SMG1-208ENST00000563448 OR6Q1Q8NGQ2 317 aa8.73□□□□□ -1.01
SMG1-208ENST00000563448 UBASH3BQ8TF42 649 aa8.73□□□□□ -1.01
SMG1-208ENST00000563448 SSC4DQ8WTU2 575 aa8.73□□□□□ -1.01
SMG1-208ENST00000563448 PIGCQ92535 297 aa8.73□□□□□ -1.01
SMG1-208ENST00000563448 ITFG2Q969R8 447 aa8.73□□□□□ -1.01
SMG1-208ENST00000563448 TMEM138Q9NPI0 162 aa8.73□□□□□ -1.01
SMG1-208ENST00000563448 CGGBP1Q9UFW8 167 aaPredicted RBP8.73□□□□□ -1.01
SMG1-208ENST00000563448 RHBDD3Q9Y3P4 386 aa8.73□□□□□ -1.01
SMG1-208ENST00000563448 ZFYVE26Q68DK2 2539 aa8.72□□□□□ -1.01
SMG1-208ENST00000563448 A0A0B4J203 849 aa8.72□□□□□ -1.01
SMG1-208ENST00000563448 CD300LBA8K4G0 201 aa8.72□□□□□ -1.01
SMG1-208ENST00000563448 ATP6V1G2-DDX39BF2Z307 99 aa8.72□□□□□ -1.01
SMG1-208ENST00000563448 AIPO00170 330 aa8.72□□□□□ -1.01
SMG1-208ENST00000563448 LILRA1O75019 489 aa8.72□□□□□ -1.01
SMG1-208ENST00000563448 ALX3O95076 343 aa8.72□□□□□ -1.01
SMG1-208ENST00000563448 NRASP01111 189 aa8.72□□□□□ -1.01
SMG1-208ENST00000563448 ALDOBP05062 364 aa8.72□□□□□ -1.01
SMG1-208ENST00000563448 PRF1P14222 555 aa8.72□□□□□ -1.01
SMG1-208ENST00000563448 RAC2P15153 192 aa8.72□□□□□ -1.01
SMG1-208ENST00000563448 TUBG1P23258 451 aa8.72□□□□□ -1.01
SMG1-208ENST00000563448 PTAFRP25105 342 aa8.72□□□□□ -1.01
SMG1-208ENST00000563448 PSMD7P51665 324 aa8.72□□□□□ -1.01
SMG1-208ENST00000563448 NKX6-1P78426 367 aaPredicted RBP8.72□□□□□ -1.01
SMG1-208ENST00000563448 BSPH1Q075Z2 132 aa8.72□□□□□ -1.01
SMG1-208ENST00000563448 SNTB2Q13425 540 aaKnown RBP8.72□□□□□ -1.01
SMG1-208ENST00000563448 ALKBH6Q3KRA9 238 aa8.72□□□□□ -1.01
SMG1-208ENST00000563448 DDI2Q5TDH0 399 aa8.72□□□□□ -1.01
SMG1-208ENST00000563448 GLT8D1Q68CQ7 371 aa8.72□□□□□ -1.01
SMG1-208ENST00000563448 FAM166AQ6J272 317 aa8.72□□□□□ -1.01
SMG1-208ENST00000563448 CRIP3Q6Q6R5 217 aa8.72□□□□□ -1.01
SMG1-208ENST00000563448 UNQ6126/PRO20091Q6UXV3 157 aa8.72□□□□□ -1.01
SMG1-208ENST00000563448 NKAIN3Q8N8D7 197 aa8.72□□□□□ -1.01
SMG1-208ENST00000563448 CSNK2A3Q8NEV1 391 aa8.72□□□□□ -1.01
SMG1-208ENST00000563448 KLF14Q8TD94 323 aaPredicted RBP8.72□□□□□ -1.01
SMG1-208ENST00000563448 AP3S1Q92572 193 aa8.72□□□□□ -1.01
SMG1-208ENST00000563448 SPACA5Q96QH8 159 aa8.72□□□□□ -1.01
SMG1-208ENST00000563448 NPDC1Q9NQX5 325 aaPredicted RBP8.72□□□□□ -1.01
SMG1-208ENST00000563448 TUBG2Q9NRH3 451 aa8.72□□□□□ -1.01
SMG1-208ENST00000563448 KCNN3Q9UGI6 736 aa8.72□□□□□ -1.01
SMG1-208ENST00000563448 NDRG3Q9UGV2 375 aa8.72□□□□□ -1.01
SMG1-208ENST00000563448 ZNF850A8MQ14 1090 aa8.71□□□□□ -1.01
SMG1-208ENST00000563448 PAHP00439 452 aa8.71□□□□□ -1.01
SMG1-208ENST00000563448 CST4P01036 141 aa8.71□□□□□ -1.01
SMG1-208ENST00000563448 AZGP1P25311 298 aaKnown RBP8.71□□□□□ -1.01
SMG1-208ENST00000563448 CFPP27918 469 aa8.71□□□□□ -1.01
SMG1-208ENST00000563448 CLDN12P56749 244 aa8.71□□□□□ -1.01
SMG1-208ENST00000563448 PSG7Q13046 419 aa8.71□□□□□ -1.01
SMG1-208ENST00000563448 MSMPQ1L6U9 139 aa8.71□□□□□ -1.01
SMG1-208ENST00000563448 MOB3CQ70IA8 216 aa8.71□□□□□ -1.01
SMG1-208ENST00000563448 C1orf174Q8IYL3 243 aa8.71□□□□□ -1.01
SMG1-208ENST00000563448 NPRL2Q8WTW4 380 aa8.71□□□□□ -1.01
SMG1-208ENST00000563448 PIGTQ969N2 578 aa8.71□□□□□ -1.01
SMG1-208ENST00000563448 SLC25A28Q96A46 364 aa8.71□□□□□ -1.01
SMG1-208ENST00000563448 KCTD12Q96CX2 325 aaKnown RBP8.71□□□□□ -1.01
SMG1-208ENST00000563448 HAVCR1Q96D42 359 aa8.71□□□□□ -1.01
SMG1-208ENST00000563448 RADILQ96JH8 1075 aa8.71□□□□□ -1.01
SMG1-208ENST00000563448 MIXL1Q9H2W2 232 aa8.71□□□□□ -1.01
SMG1-208ENST00000563448 COMMD3Q9UBI1 195 aa8.71□□□□□ -1.01
SMG1-208ENST00000563448 STEAP1Q9UHE8 339 aa8.71□□□□□ -1.01
SMG1-208ENST00000563448 GPR160Q9UJ42 338 aa8.71□□□□□ -1.01
SMG1-208ENST00000563448 RALYQ9UKM9 306 aaKnown RBP8.71□□□□□ -1.01
SMG1-208ENST00000563448 PLCE1Q9P212 2302 aa8.71□□□□□ -1.02
SMG1-208ENST00000563448 IQCF6A8MYZ5 107 aa8.71□□□□□ -1.02
SMG1-208ENST00000563448 PYCARD-AS1I3L0S3 204 aa8.71□□□□□ -1.02
SMG1-208ENST00000563448 SLC17A2O00624 439 aa8.71□□□□□ -1.02
SMG1-208ENST00000563448 ABCD4O14678 606 aa8.71□□□□□ -1.02
SMG1-208ENST00000563448 ERCC1P07992 297 aaPredicted RBP8.71□□□□□ -1.02
SMG1-208ENST00000563448 HCKP08631 526 aa8.71□□□□□ -1.02
SMG1-208ENST00000563448 SNRPBP14678 240 aaKnown RBP8.71□□□□□ -1.02
SMG1-208ENST00000563448 GLRXP35754 106 aa8.71□□□□□ -1.02
SMG1-208ENST00000563448 FABP6P51161 128 aa8.71□□□□□ -1.02
SMG1-208ENST00000563448 PRDX4Q13162 271 aa8.71□□□□□ -1.02
SMG1-208ENST00000563448 CNN3Q15417 329 aaKnown RBP8.71□□□□□ -1.02
SMG1-208ENST00000563448 ZNF718Q3SXZ3 478 aa8.71□□□□□ -1.02
SMG1-208ENST00000563448 C1orf100Q5SVJ3 147 aa8.71□□□□□ -1.02
SMG1-208ENST00000563448 NCMAPQ5T1S8 102 aa8.71□□□□□ -1.02
SMG1-208ENST00000563448 MBNL2Q5VZF2 373 aaKnown RBP8.71□□□□□ -1.02
SMG1-208ENST00000563448 RGS7BPQ6MZT1 257 aaPredicted RBP8.71□□□□□ -1.02
SMG1-208ENST00000563448 JAGN1Q8N5M9 183 aa8.71□□□□□ -1.02
SMG1-208ENST00000563448 BHLHE23Q8NDY6 225 aa8.71□□□□□ -1.02
SMG1-208ENST00000563448 OR4D6Q8NGJ1 314 aa8.71□□□□□ -1.02
SMG1-208ENST00000563448 OR5H6Q8NGV6 325 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms