RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 IGHG1P01857 330 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 HIST1H2ABP04908 130 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 MMP7P09237 267 aaPredicted RBP3.87□□□□□ -1.79
SMG1-206ENST00000562668 QDPRP09417 244 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 PSKH1P11801 424 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 ANXA8P13928 327 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 HIST1H1CP16403 213 aaKnown RBP3.87□□□□□ -1.79
SMG1-206ENST00000562668 CTLA4P16410 223 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 GSTM3P21266 225 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 SLC6A6P31641 620 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 ACVR1BP36896 505 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 POLR2IP36954 125 aaKnown RBP3.87□□□□□ -1.79
SMG1-206ENST00000562668 IFNGR2P38484 337 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 PEX19P40855 299 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 CSNK1A1P48729 337 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 DAP3P51398 398 aaKnown RBP3.87□□□□□ -1.79
SMG1-206ENST00000562668 LCN6P62502 163 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 ELF3P78545 371 aaPredicted RBP3.87□□□□□ -1.79
SMG1-206ENST00000562668 MYBPC1Q00872 1141 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 COX10Q12887 443 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 KRR1Q13601 381 aaKnown RBP3.87□□□□□ -1.79
SMG1-206ENST00000562668 SLC36A3Q495N2 470 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 HIKESHIQ53FT3 197 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 TIMM23BQ5SRD1 257 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 C9orf135Q5VTT2 229 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 CARD17Q5XLA6 110 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 FAM205BPQ63HN1 556 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 ACSM5Q6NUN0 579 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 ZFP1Q6P2D0 407 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 HIST3H2AQ7L7L0 130 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 P2RY8Q86VZ1 359 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 HIPK1Q86Z02 1210 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 ZNF584Q8IVC4 421 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 CPOQ8IVL8 374 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 SKA3Q8IX90 412 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 OR6V1Q8N148 313 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 SVOPLQ8N434 492 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 C17orf78Q8N4C9 275 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 SYT14Q8NB59 555 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 NPEPL1Q8NDH3 523 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 STEAP2Q8NFT2 490 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 FANK1Q8TC84 345 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 FAM222BQ8WU58 562 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 HTRA1Q92743 480 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 HIST1H2ACQ93077 130 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 C14orf79Q96F83 325 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 TSSK2Q96PF2 358 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 NEURL2Q9BR09 285 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 HCAR1Q9BXC0 346 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 GABARAPL3Q9BY60 117 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 SLC25A19Q9HC21 320 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 TMEM38BQ9NVV0 291 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 USE1Q9NZ43 259 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 C6orf203Q9P0P8 240 aaPredicted RBP3.87□□□□□ -1.79
SMG1-206ENST00000562668 B9D1Q9UPM9 204 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 IER3IP1Q9Y5U9 82 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 CRYBG3Q68DQ2 2970 aa3.87□□□□□ -1.79
SMG1-206ENST00000562668 APCP25054 2843 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 ANKHD1Q8IWZ3 2542 aaKnown RBP3.86□□□□□ -1.79
SMG1-206ENST00000562668 SETXQ7Z333 2677 aaKnown RBP3.86□□□□□ -1.79
SMG1-206ENST00000562668 CENPEQ02224 2701 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 IGHV1-18A0A0C4DH31 117 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 ERICH4A6NGS2 130 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 TUBAL3A6NHL2 446 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 A6NIZ1 184 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 G3V2T6 193 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 IFNL4K9M1U5 179 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 GNGT2O14610 69 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 CASQ2O14958 399 aaPredicted RBP3.86□□□□□ -1.79
SMG1-206ENST00000562668 SURF4O15260 269 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 ARHGEF9O43307 516 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 IDH3BO43837 385 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 E2F6O75461 281 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 SEC14L2O76054 403 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 MPZL1O95297 269 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 ANPEPP15144 967 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 B4GALT1P15291 398 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 ZNF14P17017 642 aaPredicted RBP3.86□□□□□ -1.79
SMG1-206ENST00000562668 ZNF23P17027 643 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 SLC2A5P22732 501 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 CDAP32320 146 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 RPL4P36578 427 aaKnown RBP3.86□□□□□ -1.79
SMG1-206ENST00000562668 CRISP1P54107 249 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 SH3BGRP55822 239 aaPredicted RBP3.86□□□□□ -1.79
SMG1-206ENST00000562668 RAP1BP61224 184 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 RAP1AP62834 184 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 HIST1H3AP68431 136 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 MRPS34P82930 218 aaKnown RBP3.86□□□□□ -1.79
SMG1-206ENST00000562668 IL1RL1Q01638 556 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 SPOCK1Q08629 439 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 CRMP1Q14194 572 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 ENDOGQ14249 297 aaKnown RBP3.86□□□□□ -1.79
SMG1-206ENST00000562668 GINS1Q14691 196 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 PPA1Q15181 289 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 PTGES3Q15185 160 aaKnown RBP3.86□□□□□ -1.79
SMG1-206ENST00000562668 PGGHGQ32M88 737 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 CLEC12AQ5QGZ9 265 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 THEM4Q5T1C6 240 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 NCMAPQ5T1S8 102 aa3.86□□□□□ -1.79
SMG1-206ENST00000562668 C1QTNF12Q5T7M4 302 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms