RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 S100A6P06703 90 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 ZNF806P0C7X5 589 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 LAP3P28838 519 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 P2RY4P51582 365 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 SNU13P55769 128 aaKnown RBP12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 ETV3LQ6ZN32 361 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 SHISA6Q6ZSJ9 500 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 C7orf61Q8IZ16 206 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 ZNF784Q8NCA9 323 aaPredicted RBP12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 OR51T1Q8NGJ9 327 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 OR5D18Q8NGL1 313 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 NANPQ8TBE9 248 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 CDCA3Q99618 268 aaPredicted RBP12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 OCSTAMPQ9BR26 566 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 VCANP13611 3396 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 CEACAM18A8MTB9 384 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 C1orf196B1AJZ1 125 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 LINC01387J3KSC0 135 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 CBR1P16152 277 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 CLRN1P58418 232 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 OR2A2Q6IF42 318 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 DHRS11Q6UWP2 260 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 Q6ZRG5 221 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 LANCL3Q6ZV70 420 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 PEG10Q86TG7 708 aaKnown RBP12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 MISPQ8IVT2 679 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 DDIT4LQ96D03 193 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 KIRREL1Q96J84 757 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 CLCC1Q96S66 551 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 SMIM3Q9BZL3 60 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 PARP12Q9H0J9 701 aaKnown RBP12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 OR10A2Q9H208 303 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 RPS10P5Q9NQ39 176 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 ANAPC10Q9UM13 185 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 RANBP2P49792 3224 aaKnown RBP12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 LILRA5A6NI73 299 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 ZNF878C9JN71 531 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 C9JQL5 133 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 S100A9P06702 114 aaKnown RBP12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 ACAA1P09110 424 aaPredicted RBP12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 HKR1P10072 659 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 CPT2P23786 658 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 CDAP32320 146 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 SULT1A2P50226 295 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 PPT1P50897 306 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 CCR5P51681 352 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 ZNF121P58317 390 aaPredicted RBP12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 HABP2Q14520 560 aaPredicted RBP12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 IAH1Q2TAA2 248 aaPredicted RBP12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 AADACL3Q5VUY0 350 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 OR8B12Q8NGG6 310 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 C1orf147Q96MC9 270 aaPredicted RBP12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 DUSP15Q9H1R2 295 aaPredicted RBP12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 C14orf166Q9Y224 244 aaKnown RBP12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 B3GALT5Q9Y2C3 310 aa12.35□□□□□ -0.43
VPS9D1-202ENST00000561976 IGHV3-20A0A0C4DH32 117 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 K7EPK0 472 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 MFNGO00587 321 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 OPN1LWP04000 364 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 CD5P06127 495 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 FCGR3AP08637 254 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 PTAFRP25105 342 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 RPL12P30050 165 aaKnown RBP12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 RBMXP38159 391 aaKnown RBP12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 FBXW4P57775 412 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 CHRFAM7AQ494W8 412 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 CARD17Q5XLA6 110 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 FAM71E2Q8N5Q1 922 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 NPRL2Q8WTW4 380 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 ST8SIA1Q92185 356 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 ZDHHC12Q96GR4 267 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 SERINC1Q9NRX5 453 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 MMP17Q9ULZ9 603 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 OSGIN2Q9Y236 505 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 LHFPL6Q9Y693 200 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 ATG2AQ2TAZ0 1938 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 ANKUB1A6NFN9 424 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 VSTM2BA6NLU5 285 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 SGCEO43556 437 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 CST4P01036 141 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 APOBEC1P41238 236 aaKnown RBP12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 DVL1P1P54792 670 aaPredicted RBP12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 FOXL2P58012 376 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 TAS2R46P59540 309 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 HSD11B2P80365 405 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 FOXF1Q12946 379 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 FAM189A2Q15884 450 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 BTNL8Q6UX41 500 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 SLC16A13Q7RTY0 426 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 LHFPL1Q86WI0 220 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 OR6S1Q8NH40 331 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 SECTM1Q8WVN6 248 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 VN1R1Q9GZP7 353 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 MOB1AQ9H8S9 216 aa12.34□□□□□ -0.43
VPS9D1-202ENST00000561976 FIGNL2A6NMB9 653 aa12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 OR8U9P0C7N5 309 aa12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 FCGR2CP31995 323 aa12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 DEFB133Q30KQ1 61 aa12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 C9orf50Q5SZB4 431 aa12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 FAM57BQ71RH2 274 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms