RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 CDKN2DP55273 166 aa3.81□□□□□ -1.8
SMG1-204ENST00000561940 VSX2P58304 361 aaPredicted RBP3.81□□□□□ -1.8
SMG1-204ENST00000561940 DOC2AQ14183 400 aa3.81□□□□□ -1.8
SMG1-204ENST00000561940 NCF4Q15080 339 aa3.81□□□□□ -1.8
SMG1-204ENST00000561940 STK11Q15831 433 aa3.81□□□□□ -1.8
SMG1-204ENST00000561940 RPEL1Q2QD12 228 aa3.81□□□□□ -1.8
SMG1-204ENST00000561940 ORMDL2Q53FV1 153 aa3.81□□□□□ -1.8
SMG1-204ENST00000561940 GCSAMLQ5JQS6 135 aa3.81□□□□□ -1.8
SMG1-204ENST00000561940 NTM-AS1Q6ZSK4 140 aa3.81□□□□□ -1.8
SMG1-204ENST00000561940 APRG1Q8IVJ8 170 aa3.81□□□□□ -1.8
SMG1-204ENST00000561940 CMTM8Q8IZV2 173 aa3.81□□□□□ -1.8
SMG1-204ENST00000561940 CBR4Q8N4T8 237 aa3.81□□□□□ -1.8
SMG1-204ENST00000561940 COX18Q8N8Q8 333 aa3.81□□□□□ -1.8
SMG1-204ENST00000561940 OR5AR1Q8NGP9 310 aa3.81□□□□□ -1.8
SMG1-204ENST00000561940 RBMXL1Q96E39 390 aaKnown RBP3.81□□□□□ -1.8
SMG1-204ENST00000561940 TIMM17AQ99595 171 aa3.81□□□□□ -1.8
SMG1-204ENST00000561940 SLC39A1Q9NY26 324 aa3.81□□□□□ -1.8
SMG1-204ENST00000561940 UBR3Q6ZT12 1888 aa3.81□□□□□ -1.8
SMG1-204ENST00000561940 ADGRB1O14514 1584 aa3.8□□□□□ -1.8
SMG1-204ENST00000561940 MROH7Q68CQ1 1323 aa3.8□□□□□ -1.8
SMG1-204ENST00000561940 IGKV1-8A0A0C4DH67 115 aa3.8□□□□□ -1.8
SMG1-204ENST00000561940 ZNF99A8MXY4 864 aaPredicted RBP3.8□□□□□ -1.8
SMG1-204ENST00000561940 H7C0C1 242 aa3.8□□□□□ -1.8
SMG1-204ENST00000561940 PGA5P0DJD9 388 aa3.8□□□□□ -1.8
SMG1-204ENST00000561940 ZNF32P17041 273 aa3.8□□□□□ -1.8
SMG1-204ENST00000561940 SLC11A1P49279 550 aa3.8□□□□□ -1.8
SMG1-204ENST00000561940 IRF4Q15306 451 aa3.8□□□□□ -1.8
SMG1-204ENST00000561940 ANGPTL8Q6UXH0 198 aa3.8□□□□□ -1.8
SMG1-204ENST00000561940 ZNF695Q8IW36 515 aa3.8□□□□□ -1.8
SMG1-204ENST00000561940 SAXO1Q8IYX7 474 aa3.8□□□□□ -1.8
SMG1-204ENST00000561940 ZNF321PQ8N8H1 164 aa3.8□□□□□ -1.8
SMG1-204ENST00000561940 FAM184AQ8NB25 1140 aa3.8□□□□□ -1.8
SMG1-204ENST00000561940 C15orf40Q8WUR7 153 aa3.8□□□□□ -1.8
SMG1-204ENST00000561940 OPALINQ96PE5 141 aa3.8□□□□□ -1.8
SMG1-204ENST00000561940 BCL7BQ9BQE9 202 aa3.8□□□□□ -1.8
SMG1-204ENST00000561940 ZNF430Q9H8G1 570 aaPredicted RBP3.8□□□□□ -1.8
SMG1-204ENST00000561940 MYOZ2Q9NPC6 264 aa3.8□□□□□ -1.8
SMG1-204ENST00000561940 MKI67P46013 3256 aaKnown RBP3.8□□□□□ -1.8
SMG1-204ENST00000561940 NFAT5O94916 1531 aa3.8□□□□□ -1.8
SMG1-204ENST00000561940 CACNA1GO43497 2377 aa3.8□□□□□ -1.8
SMG1-204ENST00000561940 TOGARAM1Q9Y4F4 1720 aa3.79□□□□□ -1.8
SMG1-204ENST00000561940 IGSF9BQ9UPX0 1349 aa3.79□□□□□ -1.8
SMG1-204ENST00000561940 TMEM120BA0PK00 339 aa3.79□□□□□ -1.8
SMG1-204ENST00000561940 OR6C74A6NCV1 312 aa3.79□□□□□ -1.8
SMG1-204ENST00000561940 H0YC42 278 aa3.79□□□□□ -1.8
SMG1-204ENST00000561940 GCM2O75603 506 aaPredicted RBP3.79□□□□□ -1.8
SMG1-204ENST00000561940 TDP2O95551 362 aa3.79□□□□□ -1.8
SMG1-204ENST00000561940 CTSLP07711 333 aa3.79□□□□□ -1.8
SMG1-204ENST00000561940 PGA4P0DJD7 388 aa3.79□□□□□ -1.8
SMG1-204ENST00000561940 PGA3P0DJD8 388 aa3.79□□□□□ -1.8
SMG1-204ENST00000561940 CACNG7P62955 275 aa3.79□□□□□ -1.8
SMG1-204ENST00000561940 LOXL1Q08397 574 aaPredicted RBP3.79□□□□□ -1.8
SMG1-204ENST00000561940 WDR43Q15061 677 aaKnown RBP eCLIP3.79□□□□□ -1.8
SMG1-204ENST00000561940 SMUG1Q53HV7 270 aa3.79□□□□□ -1.8
SMG1-204ENST00000561940 FAM78AQ5JUQ0 283 aa3.79□□□□□ -1.8
SMG1-204ENST00000561940 HORMAD1Q86X24 394 aa3.79□□□□□ -1.8
SMG1-204ENST00000561940 VKORC1L1Q8N0U8 176 aa3.79□□□□□ -1.8
SMG1-204ENST00000561940 PROKR2Q8NFJ6 384 aa3.79□□□□□ -1.8
SMG1-204ENST00000561940 OR11H7Q8NGC8 314 aa3.79□□□□□ -1.8
SMG1-204ENST00000561940 OR6Q1Q8NGQ2 317 aa3.79□□□□□ -1.8
SMG1-204ENST00000561940 RGP1Q92546 391 aaPredicted RBP3.79□□□□□ -1.8
SMG1-204ENST00000561940 DCPSQ96C86 337 aaKnown RBP3.79□□□□□ -1.8
SMG1-204ENST00000561940 CERS2Q96G23 380 aa3.79□□□□□ -1.8
SMG1-204ENST00000561940 NDFIP1Q9BT67 221 aa3.79□□□□□ -1.8
SMG1-204ENST00000561940 BLZF1Q9H2G9 400 aa3.79□□□□□ -1.8
SMG1-204ENST00000561940 PRSS16Q9NQE7 514 aa3.79□□□□□ -1.8
SMG1-204ENST00000561940 SLC17A7Q9P2U7 560 aa3.79□□□□□ -1.8
SMG1-204ENST00000561940 SAR1BQ9Y6B6 198 aa3.79□□□□□ -1.8
SMG1-204ENST00000561940 EVC2Q86UK5 1308 aa3.78□□□□□ -1.8
SMG1-204ENST00000561940 IGLV1-50A0A075B6I6 118 aa3.78□□□□□ -1.8
SMG1-204ENST00000561940 A0A1W2PRD5 423 aa3.78□□□□□ -1.8
SMG1-204ENST00000561940 A6NDN8 102 aa3.78□□□□□ -1.8
SMG1-204ENST00000561940 SYCE1LA8MT33 242 aa3.78□□□□□ -1.8
SMG1-204ENST00000561940 FOXH1O75593 365 aa3.78□□□□□ -1.8
SMG1-204ENST00000561940 CTDNEP1O95476 244 aa3.78□□□□□ -1.8
SMG1-204ENST00000561940 HPRT1P00492 218 aa3.78□□□□□ -1.8
SMG1-204ENST00000561940 DTYMKP23919 212 aa3.78□□□□□ -1.8
SMG1-204ENST00000561940 FABP6P51161 128 aa3.78□□□□□ -1.8
SMG1-204ENST00000561940 BCAP31P51572 246 aa3.78□□□□□ -1.8
SMG1-204ENST00000561940 NDUFA8P51970 172 aa3.78□□□□□ -1.8
SMG1-204ENST00000561940 ZNF121P58317 390 aaPredicted RBP3.78□□□□□ -1.8
SMG1-204ENST00000561940 DAOAP59103 153 aa3.78□□□□□ -1.8
SMG1-204ENST00000561940 ATP6V0D1P61421 351 aa3.78□□□□□ -1.8
SMG1-204ENST00000561940 ZNF33AQ06730 810 aa3.78□□□□□ -1.8
SMG1-204ENST00000561940 ART3Q13508 389 aa3.78□□□□□ -1.8
SMG1-204ENST00000561940 RBMY1FQ15415 496 aaKnown RBP3.78□□□□□ -1.8
SMG1-204ENST00000561940 HADHQ16836 314 aaKnown RBP3.78□□□□□ -1.8
SMG1-204ENST00000561940 KLHL40Q2TBA0 621 aa3.78□□□□□ -1.8
SMG1-204ENST00000561940 SAXO2Q658L1 398 aa3.78□□□□□ -1.8
SMG1-204ENST00000561940 ADNP2Q6IQ32 1131 aa3.78□□□□□ -1.8
SMG1-204ENST00000561940 NKAIN4Q8IVV8 208 aa3.78□□□□□ -1.8
SMG1-204ENST00000561940 TRAM1L1Q8N609 369 aa3.78□□□□□ -1.8
SMG1-204ENST00000561940 OR8U1Q8NH10 309 aa3.78□□□□□ -1.8
SMG1-204ENST00000561940 STARD4Q96DR4 205 aa3.78□□□□□ -1.8
SMG1-204ENST00000561940 NAA50Q9GZZ1 169 aaKnown RBP3.78□□□□□ -1.8
SMG1-204ENST00000561940 YTHDF2Q9Y5A9 579 aaKnown RBP3.78□□□□□ -1.8
SMG1-204ENST00000561940 UBIAD1Q9Y5Z9 338 aa3.78□□□□□ -1.8
SMG1-204ENST00000561940 RANBP2P49792 3224 aaKnown RBP3.78□□□□□ -1.81
SMG1-204ENST00000561940 KTN1Q86UP2 1357 aaKnown RBP3.77□□□□□ -1.81
SMG1-204ENST00000561940 TAF1LQ8IZX4 1826 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms