RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 ITFG2Q969R8 447 aa12.93□□□□□ -0.34
CCDC113-203ENST00000561517 DACT3Q96B18 629 aaPredicted RBP12.93□□□□□ -0.34
CCDC113-203ENST00000561517 OR8B2Q96RD0 313 aa12.93□□□□□ -0.34
CCDC113-203ENST00000561517 PAPOLGQ9BWT3 736 aaKnown RBP12.93□□□□□ -0.34
CCDC113-203ENST00000561517 SSBP3Q9BWW4 388 aaPredicted RBP12.93□□□□□ -0.34
CCDC113-203ENST00000561517 PPP1R3EQ9H7J1 279 aa12.93□□□□□ -0.34
CCDC113-203ENST00000561517 RNPEPL1Q9HAU8 725 aa12.93□□□□□ -0.34
CCDC113-203ENST00000561517 C1orf123Q9NWV4 160 aa12.93□□□□□ -0.34
CCDC113-203ENST00000561517 USE1Q9NZ43 259 aa12.93□□□□□ -0.34
CCDC113-203ENST00000561517 INSIG2Q9Y5U4 225 aa12.93□□□□□ -0.34
CCDC113-203ENST00000561517 MPC1Q9Y5U8 109 aa12.93□□□□□ -0.34
CCDC113-203ENST00000561517 A0A0A6YYJ9 748 aa12.92□□□□□ -0.34
CCDC113-203ENST00000561517 TMEM269A0A1B0GVZ9 245 aa12.92□□□□□ -0.34
CCDC113-203ENST00000561517 A6NLC8 198 aa12.92□□□□□ -0.34
CCDC113-203ENST00000561517 PHYHO14832 338 aa12.92□□□□□ -0.34
CCDC113-203ENST00000561517 TNFRSF13BO14836 293 aaPredicted RBP12.92□□□□□ -0.34
CCDC113-203ENST00000561517 IGLV3-1P01715 115 aa12.92□□□□□ -0.34
CCDC113-203ENST00000561517 ALPLP05186 524 aa12.92□□□□□ -0.34
CCDC113-203ENST00000561517 ADRA2CP18825 462 aa12.92□□□□□ -0.34
CCDC113-203ENST00000561517 EPHA1P21709 976 aa12.92□□□□□ -0.34
CCDC113-203ENST00000561517 GNALP38405 381 aa12.92□□□□□ -0.34
CCDC113-203ENST00000561517 RIDAP52758 137 aaKnown RBP12.92□□□□□ -0.34
CCDC113-203ENST00000561517 GNB2P62879 340 aa12.92□□□□□ -0.34
CCDC113-203ENST00000561517 HOXA4Q00056 320 aaPredicted RBP12.92□□□□□ -0.34
CCDC113-203ENST00000561517 SRSF2Q01130 221 aaKnown RBP12.92□□□□□ -0.34
CCDC113-203ENST00000561517 ZNF322Q6U7Q0 402 aaPredicted RBP12.92□□□□□ -0.34
CCDC113-203ENST00000561517 LYPD2Q6UXB3 125 aa12.92□□□□□ -0.34
CCDC113-203ENST00000561517 ZNF841Q6ZN19 808 aa12.92□□□□□ -0.34
CCDC113-203ENST00000561517 NLRC3Q7RTR2 1065 aa12.92□□□□□ -0.34
CCDC113-203ENST00000561517 C10orf67Q8IYJ2 551 aa12.92□□□□□ -0.34
CCDC113-203ENST00000561517 GALNT4Q8N4A0 578 aa12.92□□□□□ -0.34
CCDC113-203ENST00000561517 GCSAMQ8N6F7 178 aa12.92□□□□□ -0.34
CCDC113-203ENST00000561517 C19orf18Q8NEA5 215 aa12.92□□□□□ -0.34
CCDC113-203ENST00000561517 OR1M1Q8NGA1 313 aa12.92□□□□□ -0.34
CCDC113-203ENST00000561517 OR8J1Q8NGP2 316 aa12.92□□□□□ -0.34
CCDC113-203ENST00000561517 ITPKCQ96DU7 683 aa12.92□□□□□ -0.34
CCDC113-203ENST00000561517 TLNRD1Q9H1K6 362 aa12.92□□□□□ -0.34
CCDC113-203ENST00000561517 RIBC2Q9H4K1 309 aa12.92□□□□□ -0.34
CCDC113-203ENST00000561517 ABCB9Q9NP78 766 aa12.92□□□□□ -0.34
CCDC113-203ENST00000561517 CLN6Q9NWW5 311 aa12.92□□□□□ -0.34
CCDC113-203ENST00000561517 OR5V1Q9UGF6 321 aa12.92□□□□□ -0.34
CCDC113-203ENST00000561517 WARS2Q9UGM6 360 aaKnown RBP12.92□□□□□ -0.34
CCDC113-203ENST00000561517 TRAV38-1A0A0B4J264 116 aa12.91□□□□□ -0.34
CCDC113-203ENST00000561517 ANXA2P2A6NMY6 339 aa12.91□□□□□ -0.34
CCDC113-203ENST00000561517 E9PQ18 207 aa12.91□□□□□ -0.34
CCDC113-203ENST00000561517 SRSF10O75494 262 aaKnown RBP12.91□□□□□ -0.34
CCDC113-203ENST00000561517 HTR1FP30939 366 aa12.91□□□□□ -0.34
CCDC113-203ENST00000561517 CD80P33681 288 aa12.91□□□□□ -0.34
CCDC113-203ENST00000561517 CFHR2P36980 270 aa12.91□□□□□ -0.34
CCDC113-203ENST00000561517 PITPNBP48739 271 aa12.91□□□□□ -0.34
CCDC113-203ENST00000561517 CXCR4P61073 352 aa12.91□□□□□ -0.34
CCDC113-203ENST00000561517 IL5RAQ01344 420 aa12.91□□□□□ -0.34
CCDC113-203ENST00000561517 PAX8Q06710 450 aa12.91□□□□□ -0.34
CCDC113-203ENST00000561517 PRDX4Q13162 271 aa12.91□□□□□ -0.34
CCDC113-203ENST00000561517 KCNJ8Q15842 424 aa12.91□□□□□ -0.34
CCDC113-203ENST00000561517 ZNF829Q3KNS6 432 aaPredicted RBP12.91□□□□□ -0.34
CCDC113-203ENST00000561517 WDR25Q64LD2 544 aaPredicted RBP12.91□□□□□ -0.34
CCDC113-203ENST00000561517 TTTY10Q9BZA0 68 aa12.91□□□□□ -0.34
CCDC113-203ENST00000561517 PBOV1Q9GZY1 135 aa12.91□□□□□ -0.34
CCDC113-203ENST00000561517 OCEL1Q9H607 264 aa12.91□□□□□ -0.34
CCDC113-203ENST00000561517 TRIM36Q9NQ86 728 aa12.91□□□□□ -0.34
CCDC113-203ENST00000561517 NUFIP1Q9UHK0 495 aaKnown RBP12.91□□□□□ -0.34
CCDC113-203ENST00000561517 IKZF2Q9UKS7 526 aa12.91□□□□□ -0.34
CCDC113-203ENST00000561517 AUP1Q9Y679 476 aa12.91□□□□□ -0.34
CCDC113-203ENST00000561517 IGHV2-70DA0A0C4DH43 119 aa12.9□□□□□ -0.34
CCDC113-203ENST00000561517 hCG_1807616A0A1W2PRN6 198 aa12.9□□□□□ -0.34
CCDC113-203ENST00000561517 OOEPA6NGQ2 149 aa12.9□□□□□ -0.34
CCDC113-203ENST00000561517 ZNF850A8MQ14 1090 aa12.9□□□□□ -0.34
CCDC113-203ENST00000561517 ZNF670-ZNF695F2Z2N8 137 aa12.9□□□□□ -0.34
CCDC113-203ENST00000561517 EI24O14681 340 aa12.9□□□□□ -0.34
CCDC113-203ENST00000561517 NDUFA2O43678 99 aa12.9□□□□□ -0.34
CCDC113-203ENST00000561517 ATP6V1B1P15313 513 aa12.9□□□□□ -0.34
CCDC113-203ENST00000561517 MAP2K3P46734 347 aa12.9□□□□□ -0.34
CCDC113-203ENST00000561517 CDC42P60953 191 aa12.9□□□□□ -0.34
CCDC113-203ENST00000561517 CSNK2BP67870 215 aa12.9□□□□□ -0.34
CCDC113-203ENST00000561517 EGR3Q06889 387 aa12.9□□□□□ -0.34
CCDC113-203ENST00000561517 POU4F2Q12837 409 aa12.9□□□□□ -0.34
CCDC113-203ENST00000561517 TMED1Q13445 227 aa12.9□□□□□ -0.34
CCDC113-203ENST00000561517 FAM76BQ5HYJ3 339 aa12.9□□□□□ -0.34
CCDC113-203ENST00000561517 TEX36Q5VZQ5 186 aa12.9□□□□□ -0.34
CCDC113-203ENST00000561517 SFRP4Q6FHJ7 346 aaPredicted RBP12.9□□□□□ -0.34
CCDC113-203ENST00000561517 WDR82Q6UXN9 313 aa12.9□□□□□ -0.34
CCDC113-203ENST00000561517 BOLLQ8N9W6 283 aaKnown RBP12.9□□□□□ -0.34
CCDC113-203ENST00000561517 OR51G2Q8NGK0 314 aa12.9□□□□□ -0.34
CCDC113-203ENST00000561517 RAB40AQ8WXH6 277 aa12.9□□□□□ -0.34
CCDC113-203ENST00000561517 OR5P3Q8WZ94 311 aa12.9□□□□□ -0.34
CCDC113-203ENST00000561517 HRASLS5Q96KN8 279 aa12.9□□□□□ -0.34
CCDC113-203ENST00000561517 APOL4Q9BPW4 351 aa12.9□□□□□ -0.34
CCDC113-203ENST00000561517 MICU1Q9BPX6 476 aa12.9□□□□□ -0.34
CCDC113-203ENST00000561517 RTL8AQ9BWD3 113 aa12.9□□□□□ -0.34
CCDC113-203ENST00000561517 CTSZQ9UBR2 303 aa12.9□□□□□ -0.34
CCDC113-203ENST00000561517 CLN8Q9UBY8 286 aa12.9□□□□□ -0.34
CCDC113-203ENST00000561517 ZNF816-ZNF321PA0A0X1KG74 233 aa12.89□□□□□ -0.35
CCDC113-203ENST00000561517 TMEM210A6NLX4 147 aa12.89□□□□□ -0.35
CCDC113-203ENST00000561517 C3orf80F5H4A9 247 aa12.89□□□□□ -0.35
CCDC113-203ENST00000561517 MAGEB4O15481 346 aaPredicted RBP12.89□□□□□ -0.35
CCDC113-203ENST00000561517 TTRP02766 147 aa12.89□□□□□ -0.35
CCDC113-203ENST00000561517 PPIAL4GP0DN37 164 aa12.89□□□□□ -0.35
CCDC113-203ENST00000561517 EGR1P18146 543 aa12.89□□□□□ -0.35
CCDC113-203ENST00000561517 NPY4RP50391 375 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms