RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 LCA5Q86VQ0 697 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 UBQLNLQ8IYU4 475 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 PRR22Q8IZ63 422 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 SLC38A6Q8IZM9 456 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 KRT222Q8N1A0 295 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 CA13Q8N1Q1 262 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 TCAIMQ8N3R3 496 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 RPRMLQ8N4K4 120 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 KIF2BQ8N4N8 673 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 RNF10Q8N5U6 811 aaKnown RBP2.73□□□□□ -1.97
HERC1-215ENST00000561436 C14orf178Q8N769 122 aaPredicted RBP2.73□□□□□ -1.97
HERC1-215ENST00000561436 PRELID2Q8N945 189 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 OR2L5Q8NG80 312 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 OR7G1Q8NGA0 311 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 OR52K1Q8NGK4 314 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 OR1F12Q8NHA8 337 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 SGMS2Q8NHU3 365 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 LKAAEAR1Q8TD35 194 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 NAT14Q8WUY8 206 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 TSLPQ969D9 159 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 UBE2E3Q969T4 207 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 EFHD2Q96C19 240 aaPredicted RBP2.73□□□□□ -1.97
HERC1-215ENST00000561436 SLC25A38Q96DW6 304 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 VSIG2Q96IQ7 327 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 RBM14Q96PK6 669 aaKnown RBP2.73□□□□□ -1.97
HERC1-215ENST00000561436 MCHR1Q99705 422 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 NICN1Q9BSH3 213 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 NAT9Q9BTE0 207 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 DOHHQ9BU89 302 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 VCX2Q9H322 139 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 GORASP2Q9H8Y8 452 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 CHRAC1Q9NRG0 131 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 GLRX2Q9NS18 164 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 PAQR5Q9NXK6 330 aaPredicted RBP2.73□□□□□ -1.97
HERC1-215ENST00000561436 TAS2R13Q9NYV9 303 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 CFL2Q9Y281 166 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 AK6Q9Y3D8 172 aaKnown RBP2.73□□□□□ -1.97
HERC1-215ENST00000561436 CHCHD2Q9Y6H1 151 aaPredicted RBP2.73□□□□□ -1.97
HERC1-215ENST00000561436 POLEQ07864 2286 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 DOPEY2Q9Y3R5 2298 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 MYLKQ15746 1914 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 IQANK1A0A1B0GTG1 560 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 A0A1B0GWB2 263 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 PINLYPA6NC86 204 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 EEF1E1-BLOC1S5C9J1V9 151 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 ACOX3O15254 700 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 EEF1E1O43324 174 aaKnown RBP2.72□□□□□ -1.97
HERC1-215ENST00000561436 EMC8O43402 210 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 OR10H3O60404 316 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 TTC4O95801 387 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 STATHP02808 62 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 SEMG1P04279 462 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 CSF3P09919 207 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 OR8U8P0C7N1 319 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 C1GALT1C1LP0DN25 315 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 IGLL1P15814 213 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 HIST1H1TP22492 207 aaPredicted RBP2.72□□□□□ -1.97
HERC1-215ENST00000561436 LAP3P28838 519 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 UGT2B10P36537 528 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 RFC3P40938 356 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 LEPP41159 167 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 GRIA1P42261 906 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 P2RY1P47900 373 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 STARP49675 285 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 DAP3P51398 398 aaKnown RBP2.72□□□□□ -1.97
HERC1-215ENST00000561436 BTN3A2P78410 334 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 MRPS22P82650 360 aaKnown RBP2.72□□□□□ -1.97
HERC1-215ENST00000561436 LOXL1Q08397 574 aaPredicted RBP2.72□□□□□ -1.97
HERC1-215ENST00000561436 ASPHQ12797 758 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 CHIT1Q13231 466 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 RIPK1Q13546 671 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 CLEC12BQ2HXU8 276 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 TIGD3Q6B0B8 471 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 TMIGD1Q6UXZ0 262 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 TRPM8Q7Z2W7 1104 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 TMEM179BQ7Z7N9 219 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 ST13P4Q8IZP2 240 aaPredicted RBP2.72□□□□□ -1.97
HERC1-215ENST00000561436 ZCCHC7Q8N3Z6 543 aaKnown RBP2.72□□□□□ -1.97
HERC1-215ENST00000561436 TEX29Q8N6K0 151 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 OR5T3Q8NGG3 340 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 LINC01560Q8TB33 94 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 CD200R1Q8TD46 325 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 ZNF721Q8TF20 911 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 MS4A6EQ96DS6 147 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 WDR34Q96EX3 536 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 PELI1Q96FA3 418 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 SEC22AQ96IW7 307 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 IL4I1Q96RQ9 567 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 CENPKQ9BS16 269 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 MED18Q9BUE0 208 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 EFCAB11Q9BUY7 163 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 REG4Q9BYZ8 158 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 SHCBP1LQ9BZQ2 653 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 NMUR2Q9GZQ4 415 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 RHBGQ9H310 441 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 FAIMQ9NVQ4 179 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 SMPD3Q9NY59 655 aaPredicted RBP2.72□□□□□ -1.97
HERC1-215ENST00000561436 IL36GQ9NZH8 169 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 Q9UF83 564 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 ZNF223Q9UK11 482 aaPredicted RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms