RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 POU4F2Q12837 409 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 PRDX4Q13162 271 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 ODF4Q2M2E3 257 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 ZNF691Q5VV52 312 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 CATSPERDQ86XM0 798 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 PRIMA1Q86XR5 153 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 ELMOD2Q8IZ81 293 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 CELF2-AS1Q8N7Q2 184 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 LINC01356Q8N9X3 169 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 Q8TCH9 128 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 CYGBQ8WWM9 190 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 ITPKCQ96DU7 683 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 RDH12Q96NR8 316 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 RGCCQ9H4X1 137 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 TMEM165Q9HC07 324 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 ACOXLQ9NUZ1 547 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 UBAP1Q9NZ09 502 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 OR52A1Q9UKL2 312 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.66□□□□□ -0.54
TPM1-230ENST00000561266 GTF2A1LQ9UNN4 478 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 JMJD1CQ15652 2540 aa11.66□□□□□ -0.54
TPM1-230ENST00000561266 A6NIN4 97 aa11.65□□□□□ -0.54
TPM1-230ENST00000561266 ANKRD30BLA7E2S9 258 aa11.65□□□□□ -0.54
TPM1-230ENST00000561266 PLPP2O43688 288 aa11.65□□□□□ -0.54
TPM1-230ENST00000561266 FAHP16930 419 aa11.65□□□□□ -0.54
TPM1-230ENST00000561266 EGR1P18146 543 aa11.65□□□□□ -0.54
TPM1-230ENST00000561266 RIPPLY3P57055 190 aa11.65□□□□□ -0.54
TPM1-230ENST00000561266 NANOS3P60323 173 aaKnown RBP11.65□□□□□ -0.54
TPM1-230ENST00000561266 ZNF181Q2M3W8 571 aa11.65□□□□□ -0.54
TPM1-230ENST00000561266 ZNF829Q3KNS6 432 aaPredicted RBP11.65□□□□□ -0.54
TPM1-230ENST00000561266 CDONQ4KMG0 1287 aa11.65□□□□□ -0.54
TPM1-230ENST00000561266 WDR38Q5JTN6 314 aa11.65□□□□□ -0.54
TPM1-230ENST00000561266 LYPD2Q6UXB3 125 aa11.65□□□□□ -0.54
TPM1-230ENST00000561266 Q6ZSR3 168 aa11.65□□□□□ -0.54
TPM1-230ENST00000561266 KRT74Q7RTS7 529 aa11.65□□□□□ -0.54
TPM1-230ENST00000561266 LHFPL3Q86UP9 236 aa11.65□□□□□ -0.54
TPM1-230ENST00000561266 PACRGLQ8N7B6 248 aa11.65□□□□□ -0.54
TPM1-230ENST00000561266 PLPP7Q8NBV4 271 aa11.65□□□□□ -0.54
TPM1-230ENST00000561266 ZNF555Q8NEP9 628 aa11.65□□□□□ -0.54
TPM1-230ENST00000561266 OR52I1Q8NGK6 324 aa11.65□□□□□ -0.54
TPM1-230ENST00000561266 PIGCQ92535 297 aa11.65□□□□□ -0.54
TPM1-230ENST00000561266 SEH1LQ96EE3 360 aa11.65□□□□□ -0.54
TPM1-230ENST00000561266 TIMD4Q96H15 378 aa11.65□□□□□ -0.54
TPM1-230ENST00000561266 GAL3ST1Q99999 423 aa11.65□□□□□ -0.54
TPM1-230ENST00000561266 PAPOLGQ9BWT3 736 aaKnown RBP11.65□□□□□ -0.54
TPM1-230ENST00000561266 SLC22A4Q9H015 551 aa11.65□□□□□ -0.54
TPM1-230ENST00000561266 DCLRE1BQ9H816 532 aa11.65□□□□□ -0.54
TPM1-230ENST00000561266 ISG20L2Q9H9L3 353 aaKnown RBP11.65□□□□□ -0.54
TPM1-230ENST00000561266 C1orf123Q9NWV4 160 aa11.65□□□□□ -0.54
TPM1-230ENST00000561266 F5H0A9 414 aaPredicted RBP11.64□□□□□ -0.55
TPM1-230ENST00000561266 FCN3O75636 299 aa11.64□□□□□ -0.55
TPM1-230ENST00000561266 SULT1C4O75897 302 aa11.64□□□□□ -0.55
TPM1-230ENST00000561266 CST4P01036 141 aa11.64□□□□□ -0.55
TPM1-230ENST00000561266 AVPP01185 164 aa11.64□□□□□ -0.55
TPM1-230ENST00000561266 KRT8P05787 483 aa11.64□□□□□ -0.55
TPM1-230ENST00000561266 CFL1P23528 166 aaKnown RBP11.64□□□□□ -0.55
TPM1-230ENST00000561266 CD80P33681 288 aa11.64□□□□□ -0.55
TPM1-230ENST00000561266 IL5RAQ01344 420 aa11.64□□□□□ -0.55
TPM1-230ENST00000561266 SLC3A1Q07837 685 aa11.64□□□□□ -0.55
TPM1-230ENST00000561266 ZNF154Q13106 437 aa11.64□□□□□ -0.55
TPM1-230ENST00000561266 BCL2L15Q5TBC7 163 aa11.64□□□□□ -0.55
TPM1-230ENST00000561266 FAM166AQ6J272 317 aa11.64□□□□□ -0.55
TPM1-230ENST00000561266 RDH10Q8IZV5 341 aa11.64□□□□□ -0.55
TPM1-230ENST00000561266 DHRSXQ8N5I4 330 aa11.64□□□□□ -0.55
TPM1-230ENST00000561266 GCSAMQ8N6F7 178 aa11.64□□□□□ -0.55
TPM1-230ENST00000561266 BOLLQ8N9W6 283 aaKnown RBP11.64□□□□□ -0.55
TPM1-230ENST00000561266 DEFB108BQ8NET1 73 aa11.64□□□□□ -0.55
TPM1-230ENST00000561266 CSNK2A3Q8NEV1 391 aa11.64□□□□□ -0.55
TPM1-230ENST00000561266 OR1M1Q8NGA1 313 aa11.64□□□□□ -0.55
TPM1-230ENST00000561266 OR14K1Q8NGZ2 314 aa11.64□□□□□ -0.55
TPM1-230ENST00000561266 OR5P3Q8WZ94 311 aa11.64□□□□□ -0.55
TPM1-230ENST00000561266 TMEM246Q9BRR3 403 aa11.64□□□□□ -0.55
TPM1-230ENST00000561266 PATZ1Q9HBE1 687 aaKnown RBP11.64□□□□□ -0.55
TPM1-230ENST00000561266 MRPS18AQ9NVS2 196 aaKnown RBP11.64□□□□□ -0.55
TPM1-230ENST00000561266 GNG8Q9UK08 70 aa11.64□□□□□ -0.55
TPM1-230ENST00000561266 SNX5Q9Y5X3 404 aa11.64□□□□□ -0.55
TPM1-230ENST00000561266 V9GYS6 101 aa11.64□□□□□ -0.55
TPM1-230ENST00000561266 DAPL1A0PJW8 107 aa11.63□□□□□ -0.55
TPM1-230ENST00000561266 CEACAM18A8MTB9 384 aa11.63□□□□□ -0.55
TPM1-230ENST00000561266 KIAA1324LA8MWY0 1029 aaPredicted RBP11.63□□□□□ -0.55
TPM1-230ENST00000561266 B4DSR2 109 aa11.63□□□□□ -0.55
TPM1-230ENST00000561266 E9PI62 339 aa11.63□□□□□ -0.55
TPM1-230ENST00000561266 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.63□□□□□ -0.55
TPM1-230ENST00000561266 TNFRSF13BO14836 293 aaPredicted RBP11.63□□□□□ -0.55
TPM1-230ENST00000561266 LHBP01229 141 aa11.63□□□□□ -0.55
TPM1-230ENST00000561266 IGHA1P01876 353 aa11.63□□□□□ -0.55
TPM1-230ENST00000561266 MSMBP08118 114 aa11.63□□□□□ -0.55
TPM1-230ENST00000561266 MAP2K3P46734 347 aa11.63□□□□□ -0.55
TPM1-230ENST00000561266 SLC34A1Q06495 639 aa11.63□□□□□ -0.55
TPM1-230ENST00000561266 CR1LQ2VPA4 569 aa11.63□□□□□ -0.55
TPM1-230ENST00000561266 TMEM155Q4W5P6 130 aa11.63□□□□□ -0.55
TPM1-230ENST00000561266 CEP78Q5JTW2 689 aa11.63□□□□□ -0.55
TPM1-230ENST00000561266 FAM120AOSQ5T036 256 aa11.63□□□□□ -0.55
TPM1-230ENST00000561266 SFRP4Q6FHJ7 346 aaPredicted RBP11.63□□□□□ -0.55
TPM1-230ENST00000561266 C1orf229Q6ZS94 237 aaPredicted RBP11.63□□□□□ -0.55
TPM1-230ENST00000561266 KLBQ86Z14 1044 aa11.63□□□□□ -0.55
TPM1-230ENST00000561266 ACBD7Q8N6N7 88 aa11.63□□□□□ -0.55
TPM1-230ENST00000561266 OR8S1Q8NH09 359 aa11.63□□□□□ -0.55
TPM1-230ENST00000561266 RPL3LQ92901 407 aaKnown RBP11.63□□□□□ -0.55
TPM1-230ENST00000561266 PELI1Q96FA3 418 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms