RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 BORCS8Q96FH0 119 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 MEGF10Q96KG7 1140 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 GPER1Q99527 375 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 SLITRK2Q9H156 845 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 POFUT1Q9H488 388 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 TMEM106BQ9NUM4 274 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 UFSP2Q9NUQ7 469 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 UBAP1Q9NZ09 502 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 TREM2Q9NZC2 230 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 PSORS1C1Q9UIG5 152 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 POLDIP2Q9Y2S7 368 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 HELZ2Q9BYK8 2649 aaKnown RBP9.12□□□□□ -0.95
TPM1-229ENST00000561242 TRAV38-1A0A0B4J264 116 aa9.11□□□□□ -0.95
TPM1-229ENST00000561242 hCG_38984A0A1B0GV85 526 aa9.11□□□□□ -0.95
TPM1-229ENST00000561242 FAM230AA0A1W2PPH8 454 aa9.11□□□□□ -0.95
TPM1-229ENST00000561242 OR5B21A6NL26 309 aa9.11□□□□□ -0.95
TPM1-229ENST00000561242 RNF223E7ERA6 249 aa9.11□□□□□ -0.95
TPM1-229ENST00000561242 H3BSH0 61 aa9.11□□□□□ -0.95
TPM1-229ENST00000561242 H7C1Q1 480 aa9.11□□□□□ -0.95
TPM1-229ENST00000561242 NDUFS7O75251 213 aa9.11□□□□□ -0.95
TPM1-229ENST00000561242 HPXP02790 462 aa9.11□□□□□ -0.95
TPM1-229ENST00000561242 CDK1P06493 297 aa9.11□□□□□ -0.95
TPM1-229ENST00000561242 ADH4P08319 380 aa9.11□□□□□ -0.95
TPM1-229ENST00000561242 HCKP08631 526 aa9.11□□□□□ -0.95
TPM1-229ENST00000561242 FOSL1P15407 271 aa9.11□□□□□ -0.95
TPM1-229ENST00000561242 TGM4P49221 684 aa9.11□□□□□ -0.95
TPM1-229ENST00000561242 GZMKP49863 264 aa9.11□□□□□ -0.95
TPM1-229ENST00000561242 MFGE8Q08431 387 aaPredicted RBP9.11□□□□□ -0.95
TPM1-229ENST00000561242 TNK1Q13470 666 aa9.11□□□□□ -0.95
TPM1-229ENST00000561242 CEACAM21Q3KPI0 293 aa9.11□□□□□ -0.95
TPM1-229ENST00000561242 WDR38Q5JTN6 314 aa9.11□□□□□ -0.95
TPM1-229ENST00000561242 SSX6Q7RTT6 188 aa9.11□□□□□ -0.95
TPM1-229ENST00000561242 SERPINA12Q8IW75 414 aa9.11□□□□□ -0.95
TPM1-229ENST00000561242 APH1BQ8WW43 257 aa9.11□□□□□ -0.95
TPM1-229ENST00000561242 UFD1Q92890 307 aa9.11□□□□□ -0.95
TPM1-229ENST00000561242 C18orf12Q96KH6 178 aa9.11□□□□□ -0.95
TPM1-229ENST00000561242 JAM3Q9BX67 310 aa9.11□□□□□ -0.95
TPM1-229ENST00000561242 PCDHB16Q9NRJ7 776 aa9.11□□□□□ -0.95
TPM1-229ENST00000561242 C1orf123Q9NWV4 160 aa9.11□□□□□ -0.95
TPM1-229ENST00000561242 RNF7Q9UBF6 113 aa9.11□□□□□ -0.95
TPM1-229ENST00000561242 RHBDD3Q9Y3P4 386 aa9.11□□□□□ -0.95
TPM1-229ENST00000561242 PPIAL4EA0A075B759 164 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 IGHV3-64DA0A0J9YX35 117 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 LOC107986453A0A1B0GWG9 222 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 ANKRD61A6NGH8 418 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 ZNF732B4DXR9 585 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 PPIAL4DF5H284 164 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 DENRO43583 198 aaKnown RBP9.1□□□□□ -0.95
TPM1-229ENST00000561242 NDUFA2O43678 99 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 MRPS14O60783 128 aaKnown RBP9.1□□□□□ -0.95
TPM1-229ENST00000561242 LY6HO94772 140 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 TTRP02766 147 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 INHBBP09529 407 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 PPIAL4FP0DN26 164 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 PSKH1P11801 424 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 FAHP16930 419 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 COL8A2P25067 703 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 CD200P41217 278 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 NR4A2P43354 598 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 ETV1P50549 477 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 GPM6AP51674 278 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 FUT6P51993 359 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 PRSS12P56730 875 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 SPHARQ15513 63 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 TRAM1Q15629 374 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 MICBQ29980 383 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 CYB5R2Q6BCY4 276 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 FDX2Q6P4F2 183 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 SPNS3Q6ZMD2 512 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 MS4A15Q8N5U1 240 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 TEX29Q8N6K0 151 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 PNLDC1Q8NA58 520 aaKnown RBP9.1□□□□□ -0.95
TPM1-229ENST00000561242 WFDC11Q8NEX6 87 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 C10orf105Q8TEF2 133 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 FGGYQ96C11 551 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 PELI1Q96FA3 418 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 NARFLQ9H6Q4 476 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 ISG20L2Q9H9L3 353 aaKnown RBP9.1□□□□□ -0.95
TPM1-229ENST00000561242 G6PC2Q9NQR9 355 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 ZNF275Q9NSD4 429 aaPredicted RBP9.1□□□□□ -0.95
TPM1-229ENST00000561242 FRRS1LQ9P0K9 344 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 ZNF281Q9Y2X9 895 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 PPIAL4AQ9Y536 164 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 NPTNQ9Y639 398 aa9.1□□□□□ -0.95
TPM1-229ENST00000561242 SPTAN1Q13813 2472 aaKnown RBP9.09□□□□□ -0.95
TPM1-229ENST00000561242 PKDREJQ9NTG1 2253 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 LRP5LA4QPB2 252 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 NKX6-3A6NJ46 265 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 E9PQ18 207 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 LYNX1G3V0Z9 82 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 PNPP00491 289 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 ISG15P05161 165 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 LYNX1P0DP58 116 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 CELP19835 753 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 RAB3AP20336 220 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 HNF1AP20823 631 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 CPT2P23786 658 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 MDH2P40926 338 aaKnown RBP9.09□□□□□ -0.95
TPM1-229ENST00000561242 RBP2P50120 134 aa9.09□□□□□ -0.95
TPM1-229ENST00000561242 RIN1Q13671 783 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms