RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 TMEM86BQ8N661 226 aa13.41□□□□□ -0.26
SNX1-213ENST00000561026 LRRC29Q8WV35 223 aa13.41□□□□□ -0.26
SNX1-213ENST00000561026 LRGUKQ96M69 825 aa13.41□□□□□ -0.26
SNX1-213ENST00000561026 OR10A2Q9H208 303 aa13.41□□□□□ -0.26
SNX1-213ENST00000561026 RGCCQ9H4X1 137 aa13.41□□□□□ -0.26
SNX1-213ENST00000561026 PPP1R3EQ9H7J1 279 aa13.41□□□□□ -0.26
SNX1-213ENST00000561026 TNFRSF19Q9NS68 423 aa13.41□□□□□ -0.26
SNX1-213ENST00000561026 ACOXLQ9NUZ1 547 aa13.41□□□□□ -0.26
SNX1-213ENST00000561026 PRPF19Q9UMS4 504 aaKnown RBP13.41□□□□□ -0.26
SNX1-213ENST00000561026 RHBDD3Q9Y3P4 386 aa13.41□□□□□ -0.26
SNX1-213ENST00000561026 IGHV1-69DA0A0B4J2H0 117 aa13.4□□□□□ -0.26
SNX1-213ENST00000561026 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.4□□□□□ -0.26
SNX1-213ENST00000561026 ACOT8O14734 319 aa13.4□□□□□ -0.26
SNX1-213ENST00000561026 IGHV1-69P01742 117 aa13.4□□□□□ -0.26
SNX1-213ENST00000561026 CRYBA1P05813 215 aa13.4□□□□□ -0.26
SNX1-213ENST00000561026 MELTFP08582 738 aa13.4□□□□□ -0.26
SNX1-213ENST00000561026 PAICSP22234 425 aaKnown RBP13.4□□□□□ -0.26
SNX1-213ENST00000561026 ARF6P62330 175 aa13.4□□□□□ -0.26
SNX1-213ENST00000561026 CSNK2BP67870 215 aa13.4□□□□□ -0.26
SNX1-213ENST00000561026 GFOD2Q3B7J2 385 aa13.4□□□□□ -0.26
SNX1-213ENST00000561026 FIP1L1Q6UN15 594 aaKnown RBP13.4□□□□□ -0.26
SNX1-213ENST00000561026 WDR82Q6UXN9 313 aa13.4□□□□□ -0.26
SNX1-213ENST00000561026 GALNT4Q8N4A0 578 aa13.4□□□□□ -0.26
SNX1-213ENST00000561026 CSNK2A3Q8NEV1 391 aa13.4□□□□□ -0.26
SNX1-213ENST00000561026 CCDC124Q96CT7 223 aaKnown RBP13.4□□□□□ -0.26
SNX1-213ENST00000561026 PAPOLGQ9BWT3 736 aaKnown RBP13.4□□□□□ -0.26
SNX1-213ENST00000561026 CHIAQ9BZP6 476 aa13.4□□□□□ -0.26
SNX1-213ENST00000561026 OR51V1Q9H2C8 321 aa13.4□□□□□ -0.26
SNX1-213ENST00000561026 CNTD2Q9H8S5 307 aa13.4□□□□□ -0.26
SNX1-213ENST00000561026 BRD7Q9NPI1 651 aa13.4□□□□□ -0.26
SNX1-213ENST00000561026 RPUSD1Q9UJJ7 312 aaKnown RBP13.4□□□□□ -0.26
SNX1-213ENST00000561026 POMT1Q9Y6A1 747 aa13.4□□□□□ -0.26
SNX1-213ENST00000561026 A0A1B0GUS0 222 aa13.39□□□□□ -0.27
SNX1-213ENST00000561026 H2BFMP0C1H6 154 aa13.39□□□□□ -0.27
SNX1-213ENST00000561026 POU1F1P28069 291 aa13.39□□□□□ -0.27
SNX1-213ENST00000561026 GNALP38405 381 aa13.39□□□□□ -0.27
SNX1-213ENST00000561026 NAA10P41227 235 aaPredicted RBP13.39□□□□□ -0.27
SNX1-213ENST00000561026 ELF3P78545 371 aaPredicted RBP13.39□□□□□ -0.27
SNX1-213ENST00000561026 SNCBQ16143 134 aa13.39□□□□□ -0.27
SNX1-213ENST00000561026 CDONQ4KMG0 1287 aa13.39□□□□□ -0.27
SNX1-213ENST00000561026 WDR38Q5JTN6 314 aa13.39□□□□□ -0.27
SNX1-213ENST00000561026 PLBD1Q6P4A8 553 aa13.39□□□□□ -0.27
SNX1-213ENST00000561026 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.39□□□□□ -0.27
SNX1-213ENST00000561026 ADGRG5Q8IZF4 528 aa13.39□□□□□ -0.27
SNX1-213ENST00000561026 FTMTQ8N4E7 242 aa13.39□□□□□ -0.27
SNX1-213ENST00000561026 OTOSQ8NHW6 89 aa13.39□□□□□ -0.27
SNX1-213ENST00000561026 SSMEM1Q8WWF3 244 aa13.39□□□□□ -0.27
SNX1-213ENST00000561026 ST8SIA4Q92187 359 aa13.39□□□□□ -0.27
SNX1-213ENST00000561026 LHX4Q969G2 390 aa13.39□□□□□ -0.27
SNX1-213ENST00000561026 C12orf43Q96C57 262 aaKnown RBP13.39□□□□□ -0.27
SNX1-213ENST00000561026 ITPKCQ96DU7 683 aa13.39□□□□□ -0.27
SNX1-213ENST00000561026 PGAM5Q96HS1 289 aa13.39□□□□□ -0.27
SNX1-213ENST00000561026 CLPTM1LQ96KA5 538 aa13.39□□□□□ -0.27
SNX1-213ENST00000561026 CCL13Q99616 98 aa13.39□□□□□ -0.27
SNX1-213ENST00000561026 TLNRD1Q9H1K6 362 aa13.39□□□□□ -0.27
SNX1-213ENST00000561026 BEX1Q9HBH7 125 aa13.39□□□□□ -0.27
SNX1-213ENST00000561026 TAS2R1Q9NYW7 299 aa13.39□□□□□ -0.27
SNX1-213ENST00000561026 A0A1B0GW55 424 aa13.38□□□□□ -0.27
SNX1-213ENST00000561026 ANXA2P2A6NMY6 339 aa13.38□□□□□ -0.27
SNX1-213ENST00000561026 PRR23D1E9PI22 279 aaPredicted RBP13.38□□□□□ -0.27
SNX1-213ENST00000561026 CDIPTO14735 213 aa13.38□□□□□ -0.27
SNX1-213ENST00000561026 LYNP07948 512 aa13.38□□□□□ -0.27
SNX1-213ENST00000561026 DUX4L2P0CJ85 424 aa13.38□□□□□ -0.27
SNX1-213ENST00000561026 DUX4L3P0CJ86 424 aa13.38□□□□□ -0.27
SNX1-213ENST00000561026 DUX4L4P0CJ87 422 aa13.38□□□□□ -0.27
SNX1-213ENST00000561026 DUX4L5P0CJ88 424 aa13.38□□□□□ -0.27
SNX1-213ENST00000561026 DUX4L6P0CJ89 424 aa13.38□□□□□ -0.27
SNX1-213ENST00000561026 DUX4L7P0CJ90 424 aa13.38□□□□□ -0.27
SNX1-213ENST00000561026 PRR23D2P0DMB1 279 aaPredicted RBP13.38□□□□□ -0.27
SNX1-213ENST00000561026 RELBQ01201 579 aa13.38□□□□□ -0.27
SNX1-213ENST00000561026 IL5RAQ01344 420 aa13.38□□□□□ -0.27
SNX1-213ENST00000561026 GINS1Q14691 196 aa13.38□□□□□ -0.27
SNX1-213ENST00000561026 DUX4L9Q6RFH8 374 aaPredicted RBP13.38□□□□□ -0.27
SNX1-213ENST00000561026 TMEM179BQ7Z7N9 219 aa13.38□□□□□ -0.27
SNX1-213ENST00000561026 FGFRL1Q8N441 504 aa13.38□□□□□ -0.27
SNX1-213ENST00000561026 ZNF454Q8N9F8 522 aa13.38□□□□□ -0.27
SNX1-213ENST00000561026 LY6G5BQ8NDX9 201 aa13.38□□□□□ -0.27
SNX1-213ENST00000561026 OR4F5Q8NH21 305 aa13.38□□□□□ -0.27
SNX1-213ENST00000561026 THEM6Q8WUY1 208 aa13.38□□□□□ -0.27
SNX1-213ENST00000561026 SEH1LQ96EE3 360 aa13.38□□□□□ -0.27
SNX1-213ENST00000561026 MICU1Q9BPX6 476 aa13.38□□□□□ -0.27
SNX1-213ENST00000561026 C1orf21Q9H246 121 aa13.38□□□□□ -0.27
SNX1-213ENST00000561026 C1RLQ9NZP8 487 aa13.38□□□□□ -0.27
SNX1-213ENST00000561026 PDP1Q9P0J1 537 aaPredicted RBP13.38□□□□□ -0.27
SNX1-213ENST00000561026 DUX4Q9UBX2 424 aa13.38□□□□□ -0.27
SNX1-213ENST00000561026 MPC1Q9Y5U8 109 aa13.38□□□□□ -0.27
SNX1-213ENST00000561026 KPTNQ9Y664 436 aa13.38□□□□□ -0.27
SNX1-213ENST00000561026 SELENOFO60613 162 aa13.37□□□□□ -0.27
SNX1-213ENST00000561026 NDUFA7O95182 113 aa13.37□□□□□ -0.27
SNX1-213ENST00000561026 FAM107AO95990 144 aa13.37□□□□□ -0.27
SNX1-213ENST00000561026 KNG1P01042 644 aa13.37□□□□□ -0.27
SNX1-213ENST00000561026 ACKR3P25106 362 aa13.37□□□□□ -0.27
SNX1-213ENST00000561026 RAG2P55895 527 aa13.37□□□□□ -0.27
SNX1-213ENST00000561026 ATPAF1Q5TC12 328 aaPredicted RBP13.37□□□□□ -0.27
SNX1-213ENST00000561026 TREML4Q6UXN2 200 aa13.37□□□□□ -0.27
SNX1-213ENST00000561026 SLC36A1Q7Z2H8 476 aa13.37□□□□□ -0.27
SNX1-213ENST00000561026 KIR3DL3Q8N743 410 aa13.37□□□□□ -0.27
SNX1-213ENST00000561026 FAM216BQ8N7L0 139 aa13.37□□□□□ -0.27
SNX1-213ENST00000561026 CCDC197Q8NCU1 140 aa13.37□□□□□ -0.27
SNX1-213ENST00000561026 TBC1D15Q8TC07 691 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms