RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 IGLV3-19P01714 112 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 MAS1P04201 325 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 IGKV3-11P04433 115 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 RLN1P04808 185 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 ISG15P05161 165 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 GP1BAP07359 652 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 TBC1D3HP0C7X1 549 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 LYL1P12980 280 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 GTF2F2P13984 249 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 ST6GAL1P15907 406 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 ADCYAP1P18509 176 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 RAB3AP20336 220 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 CNR1P21554 472 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 ABCD3P28288 659 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 HTR2CP28335 458 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 HSD11B1P28845 292 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 GDI1P31150 447 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 AKT2P31751 481 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 PRSS3P35030 304 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 DLSTP36957 453 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 PPICP45877 212 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 RABIFP47224 123 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 CAPZBP47756 277 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 FASLGP48023 281 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 SLC37A1P57057 533 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 TIRAPP58753 221 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 UBE2MP61081 183 aaKnown RBP2.16□□□□□ -2.06
SPG11-223ENST00000560858 RPL27P61353 136 aaKnown RBP2.16□□□□□ -2.06
SPG11-223ENST00000560858 PPP1CAP62136 330 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 LCN6P62502 163 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 DCDP81605 110 aaKnown RBP2.16□□□□□ -2.06
SPG11-223ENST00000560858 QRFPP83859 136 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 ZNF117Q03924 483 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 PMPCAQ10713 525 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 DHRS2Q13268 280 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 BIKQ13323 160 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 EIF3IQ13347 325 aaKnown RBP2.16□□□□□ -2.06
SPG11-223ENST00000560858 BTN1A1Q13410 526 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 TDGQ13569 410 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 MELKQ14680 651 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 MEF2DQ14814 521 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 SLC17A1Q14916 467 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 EBPQ15125 230 aaKnown RBP2.16□□□□□ -2.06
SPG11-223ENST00000560858 ELOCQ15369 112 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 SHBQ15464 509 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 TOMM34Q15785 309 aaPredicted RBP2.16□□□□□ -2.06
SPG11-223ENST00000560858 STK11Q15831 433 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 NNATQ16517 81 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 MEP1BQ16820 701 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 DEFB110Q30KQ9 67 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 ZNF672Q499Z4 452 aaPredicted RBP2.16□□□□□ -2.06
SPG11-223ENST00000560858 FAM74A3Q4VXF1 159 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 PABPC1L2AQ5JQF8 200 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 CLVS2Q5SYC1 327 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 C10orf91Q5T1B1 145 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.16□□□□□ -2.06
SPG11-223ENST00000560858 NSUN5P2Q63ZY6 315 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 TMEM225Q6GV28 225 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 DHRS7BQ6IAN0 325 aaPredicted RBP2.16□□□□□ -2.06
SPG11-223ENST00000560858 TBC1D3CQ6IPX1 549 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 RAB12Q6IQ22 244 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 LIN54Q6MZP7 749 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 ADAM5Q6NVV9 412 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 MYO7BQ6PIF6 2116 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 DEGS2Q6QHC5 323 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 CBLN3Q6UW01 205 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 ATRAIDQ6UW56 229 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 TMEM205Q6UW68 189 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 DRAM2Q6UX65 266 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 NDUFAF7Q7L592 441 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 DPY19L4Q7Z388 723 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 OR2W3Q7Z3T1 314 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 SLC25A42Q86VD7 318 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 TMEM17Q86X19 198 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 UEVLDQ8IX04 471 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 YAF2Q8IY57 180 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 CCDC36Q8IYA8 594 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 PM20D2Q8IYS1 436 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 ZNF679Q8IYX0 411 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 TBC1D3Q8IZP1 549 aaPredicted RBP2.16□□□□□ -2.06
SPG11-223ENST00000560858 SLC22A18ASQ8N1D0 253 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 BEST3Q8N1M1 668 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 PAQR4Q8N4S7 273 aaPredicted RBP2.16□□□□□ -2.06
SPG11-223ENST00000560858 FRMD1Q8N878 549 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 ZNF441Q8N8Z8 693 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.16□□□□□ -2.06
SPG11-223ENST00000560858 AVL9Q8NBF6 648 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 SLC30A7Q8NEW0 376 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 STEAP2Q8NFT2 490 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 SLC26A10Q8NG04 563 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 OR51D1Q8NGF3 324 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 OR1J4Q8NGS1 313 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 OR1J2Q8NGS2 313 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 OR10K1Q8NGX5 313 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 OR4C3Q8NH37 302 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 OR52N5Q8NH56 324 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 ST7LQ8TDW4 575 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 DOK4Q8TEW6 326 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 DUSP19Q8WTR2 217 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 MITD1Q8WV92 249 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms