RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.38□□□□□ -0.75
RABGGTA-213ENST00000560127 C11orf53Q8IXP5 236 aa10.38□□□□□ -0.75
RABGGTA-213ENST00000560127 DTX3Q8N9I9 347 aa10.38□□□□□ -0.75
RABGGTA-213ENST00000560127 SEH1LQ96EE3 360 aa10.38□□□□□ -0.75
RABGGTA-213ENST00000560127 ZNF570Q96NI8 536 aa10.38□□□□□ -0.75
RABGGTA-213ENST00000560127 WNT10AQ9GZT5 417 aa10.38□□□□□ -0.75
RABGGTA-213ENST00000560127 NMNAT1Q9HAN9 279 aaPredicted RBP10.38□□□□□ -0.75
RABGGTA-213ENST00000560127 NDE1Q9NXR1 346 aa10.38□□□□□ -0.75
RABGGTA-213ENST00000560127 VSX1Q9NZR4 365 aaPredicted RBP10.38□□□□□ -0.75
RABGGTA-213ENST00000560127 SAMD4AQ9UPU9 718 aaKnown RBP10.38□□□□□ -0.75
RABGGTA-213ENST00000560127 AURKCQ9UQB9 309 aa10.38□□□□□ -0.75
RABGGTA-213ENST00000560127 CSMD3Q7Z407 3707 aa10.38□□□□□ -0.75
RABGGTA-213ENST00000560127 DSCAML1Q8TD84 2053 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 A0A1W2PRX2 142 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 EFCAB9A8MZ26 197 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 C3orf84H3BNL1 204 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 M0R1W7 72 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 NDUFB3O43676 98 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 ANOS1P23352 680 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 TGM4P49221 684 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 MNAT1P51948 309 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 FXYD6P3P58550 94 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 SLC35A2P78381 396 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 PRKCDQ05655 676 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 ST3GAL3Q11203 375 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 KRR1Q13601 381 aaKnown RBP10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 TRAM2Q15035 370 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 MICBQ29980 383 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 PGM2L1Q6PCE3 622 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 CFAP77Q6ZQR2 320 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 LIAT1Q6ZQX7 453 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 FKBP9P1Q75LS8 142 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 SLC36A1Q7Z2H8 476 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 PYURFQ96I23 114 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 NSMCE2Q96MF7 247 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 DDOQ99489 341 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 FNDC11Q9BVV2 318 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 NUAK2Q9H093 628 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 C1orf21Q9H246 121 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 METTL8Q9H825 291 aaKnown RBP10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 VNN3Q9NY84 501 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 MRPL15Q9P015 296 aaKnown RBP10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 ACTR3BQ9P1U1 418 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 SF3B6Q9Y3B4 125 aaKnown RBP10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 U3KQK5 164 aa10.37□□□□□ -0.75
RABGGTA-213ENST00000560127 HYDINQ4G0P3 5121 aa10.36□□□□□ -0.75
RABGGTA-213ENST00000560127 STARD9Q9P2P6 4700 aa10.36□□□□□ -0.75
RABGGTA-213ENST00000560127 A0A1W2PRQ8 180 aa10.36□□□□□ -0.75
RABGGTA-213ENST00000560127 E9PQ18 207 aa10.36□□□□□ -0.75
RABGGTA-213ENST00000560127 FAHP16930 419 aa10.36□□□□□ -0.75
RABGGTA-213ENST00000560127 RHCEP18577 417 aa10.36□□□□□ -0.75
RABGGTA-213ENST00000560127 HOXD3P31249 432 aaPredicted RBP10.36□□□□□ -0.75
RABGGTA-213ENST00000560127 MAGEA2P43356 314 aa10.36□□□□□ -0.75
RABGGTA-213ENST00000560127 GPR4P46093 362 aa10.36□□□□□ -0.75
RABGGTA-213ENST00000560127 ZNF92Q03936 586 aa10.36□□□□□ -0.75
RABGGTA-213ENST00000560127 TRAP1Q12931 704 aaKnown RBP10.36□□□□□ -0.75
RABGGTA-213ENST00000560127 BNIP1Q12981 228 aa10.36□□□□□ -0.75
RABGGTA-213ENST00000560127 DGCR6Q14129 220 aa10.36□□□□□ -0.75
RABGGTA-213ENST00000560127 LRRC10Q5BKY1 277 aa10.36□□□□□ -0.75
RABGGTA-213ENST00000560127 PTCHD4Q6ZW05 846 aa10.36□□□□□ -0.75
RABGGTA-213ENST00000560127 MBOAT2Q6ZWT7 520 aa10.36□□□□□ -0.75
RABGGTA-213ENST00000560127 LRRC29Q8WV35 223 aa10.36□□□□□ -0.75
RABGGTA-213ENST00000560127 H1FXQ92522 213 aaKnown RBP10.36□□□□□ -0.75
RABGGTA-213ENST00000560127 CCDC124Q96CT7 223 aaKnown RBP10.36□□□□□ -0.75
RABGGTA-213ENST00000560127 RCC1LQ96I51 464 aaKnown RBP10.36□□□□□ -0.75
RABGGTA-213ENST00000560127 OR5M11Q96RB7 305 aa10.36□□□□□ -0.75
RABGGTA-213ENST00000560127 KRTAP17-1Q9BYP8 105 aa10.36□□□□□ -0.75
RABGGTA-213ENST00000560127 PNRC2Q9NPJ4 139 aaKnown RBP10.36□□□□□ -0.75
RABGGTA-213ENST00000560127 GGT3PA6NGU5 568 aa10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 DCTN6O00399 190 aa10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 ANGPTL7O43827 346 aa10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 H1F0P07305 194 aaKnown RBP10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 PF4V1P10720 104 aa10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 SDHAP31040 664 aa10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 GGT2P36268 569 aa10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 OMPP47874 163 aa10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 CENPAP49450 140 aa10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 CD83Q01151 205 aa10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 ECH1Q13011 328 aa10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 TRIM25Q14258 630 aaKnown RBP10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 SNAI3Q3KNW1 292 aa10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 ZBED5Q49AG3 693 aa10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 ATPAF1Q5TC12 328 aaPredicted RBP10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 STUMQ69YW2 141 aa10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 SLC18B1Q6NT16 456 aa10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 WDR86Q86TI4 376 aa10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 LINC00346Q8IVM7 164 aa10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 ARHGAP24Q8N264 748 aa10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 OR2AE1Q8NHA4 323 aa10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 TSSK2Q96PF2 358 aa10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 PITX2Q99697 317 aa10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 ATF6BQ99941 703 aa10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 THTPAQ9BU02 230 aa10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 CDCA4Q9BXL8 241 aa10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 CADM1Q9BY67 442 aaKnown RBP10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 ANKRD19PQ9H560 264 aa10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 RNPEPL1Q9HAU8 725 aa10.35□□□□□ -0.75
RABGGTA-213ENST00000560127 SOCS2O14508 198 aa10.34□□□□□ -0.75
RABGGTA-213ENST00000560127 TFF1P04155 84 aa10.34□□□□□ -0.75
RABGGTA-213ENST00000560127 CDKN2AP42771 156 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms