RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 TREM2Q9NZC2 230 aa14.21□□□□□ -0.13
RPL28-209ENST00000560055 GTF2A1LQ9UNN4 478 aa14.21□□□□□ -0.13
RPL28-209ENST00000560055 PPP1R3CQ9UQK1 317 aa14.21□□□□□ -0.13
RPL28-209ENST00000560055 SLC22A13Q9Y226 551 aa14.21□□□□□ -0.13
RPL28-209ENST00000560055 RHBDD3Q9Y3P4 386 aa14.21□□□□□ -0.13
RPL28-209ENST00000560055 LOC100289279A0A1B0GTE1 492 aa14.2□□□□□ -0.14
RPL28-209ENST00000560055 IRGMA1A4Y4 181 aa14.2□□□□□ -0.14
RPL28-209ENST00000560055 PPIHO43447 177 aaKnown RBP14.2□□□□□ -0.14
RPL28-209ENST00000560055 DHRS3O75911 302 aa14.2□□□□□ -0.14
RPL28-209ENST00000560055 LIMS3P0CW19 117 aa14.2□□□□□ -0.14
RPL28-209ENST00000560055 LIMS4P0CW20 117 aa14.2□□□□□ -0.14
RPL28-209ENST00000560055 PSMB10P40306 273 aa14.2□□□□□ -0.14
RPL28-209ENST00000560055 ZNF181Q2M3W8 571 aa14.2□□□□□ -0.14
RPL28-209ENST00000560055 TMEM249Q2WGJ8 235 aa14.2□□□□□ -0.14
RPL28-209ENST00000560055 IZUMO2Q6UXV1 221 aa14.2□□□□□ -0.14
RPL28-209ENST00000560055 FTMTQ8N4E7 242 aa14.2□□□□□ -0.14
RPL28-209ENST00000560055 SPERTQ8NA61 448 aa14.2□□□□□ -0.14
RPL28-209ENST00000560055 MRPL48Q96GC5 212 aaKnown RBP14.2□□□□□ -0.14
RPL28-209ENST00000560055 C4orf36Q96KX1 117 aa14.2□□□□□ -0.14
RPL28-209ENST00000560055 MYCBPQ99417 103 aaPredicted RBP14.2□□□□□ -0.14
RPL28-209ENST00000560055 PPP1R3EQ9H7J1 279 aa14.2□□□□□ -0.14
RPL28-209ENST00000560055 ISG20L2Q9H9L3 353 aaKnown RBP14.2□□□□□ -0.14
RPL28-209ENST00000560055 PLCXD1Q9NUJ7 323 aa14.2□□□□□ -0.14
RPL28-209ENST00000560055 V9GYS6 101 aa14.2□□□□□ -0.14
RPL28-209ENST00000560055 DYSFO75923 2080 aa14.19□□□□□ -0.14
RPL28-209ENST00000560055 DHRS7CA6NNS2 312 aa14.19□□□□□ -0.14
RPL28-209ENST00000560055 J3QLW9 94 aa14.19□□□□□ -0.14
RPL28-209ENST00000560055 IFNL4K9M1U5 179 aa14.19□□□□□ -0.14
RPL28-209ENST00000560055 WNT9BO14905 357 aa14.19□□□□□ -0.14
RPL28-209ENST00000560055 PIPP12273 146 aaPredicted RBP14.19□□□□□ -0.14
RPL28-209ENST00000560055 ZNF19P17023 458 aa14.19□□□□□ -0.14
RPL28-209ENST00000560055 RBMXP38159 391 aaKnown RBP14.19□□□□□ -0.14
RPL28-209ENST00000560055 PMELP40967 661 aa14.19□□□□□ -0.14
RPL28-209ENST00000560055 KIR3DL2P43630 455 aa14.19□□□□□ -0.14
RPL28-209ENST00000560055 MAP2K3P46734 347 aa14.19□□□□□ -0.14
RPL28-209ENST00000560055 NANOS3P60323 173 aaKnown RBP14.19□□□□□ -0.14
RPL28-209ENST00000560055 SLC3A1Q07837 685 aa14.19□□□□□ -0.14
RPL28-209ENST00000560055 ZBTB37Q5TC79 503 aa14.19□□□□□ -0.14
RPL28-209ENST00000560055 COMMD2Q86X83 199 aa14.19□□□□□ -0.14
RPL28-209ENST00000560055 SEMA6DQ8NFY4 1073 aa14.19□□□□□ -0.14
RPL28-209ENST00000560055 OR14K1Q8NGZ2 314 aa14.19□□□□□ -0.14
RPL28-209ENST00000560055 OR2G2Q8NGZ5 317 aa14.19□□□□□ -0.14
RPL28-209ENST00000560055 Q8TCH9 128 aa14.19□□□□□ -0.14
RPL28-209ENST00000560055 GGHQ92820 318 aa14.19□□□□□ -0.14
RPL28-209ENST00000560055 ERGIC1Q969X5 290 aa14.19□□□□□ -0.14
RPL28-209ENST00000560055 ITPKCQ96DU7 683 aa14.19□□□□□ -0.14
RPL28-209ENST00000560055 FAM71F1Q96KD3 344 aaPredicted RBP14.19□□□□□ -0.14
RPL28-209ENST00000560055 PAPOLGQ9BWT3 736 aaKnown RBP14.19□□□□□ -0.14
RPL28-209ENST00000560055 ANKRD60Q9BZ19 345 aa14.19□□□□□ -0.14
RPL28-209ENST00000560055 CNOT2Q9NZN8 540 aaKnown RBP14.19□□□□□ -0.14
RPL28-209ENST00000560055 PSORS1C1Q9UIG5 152 aa14.19□□□□□ -0.14
RPL28-209ENST00000560055 DIMT1Q9UNQ2 313 aaKnown RBP14.19□□□□□ -0.14
RPL28-209ENST00000560055 WIPI2Q9Y4P8 454 aa14.19□□□□□ -0.14
RPL28-209ENST00000560055 MPC1Q9Y5U8 109 aa14.19□□□□□ -0.14
RPL28-209ENST00000560055 YLPM1P49750 1951 aaKnown RBP14.19□□□□□ -0.14
RPL28-209ENST00000560055 IGHV3-64DA0A0J9YX35 117 aa14.18□□□□□ -0.14
RPL28-209ENST00000560055 ZNF816-ZNF321PA0A0X1KG74 233 aa14.18□□□□□ -0.14
RPL28-209ENST00000560055 LRP5LA4QPB2 252 aa14.18□□□□□ -0.14
RPL28-209ENST00000560055 TMEM178BH3BS89 294 aa14.18□□□□□ -0.14
RPL28-209ENST00000560055 P2RY10O00398 339 aa14.18□□□□□ -0.14
RPL28-209ENST00000560055 XPNPEP2O43895 674 aa14.18□□□□□ -0.14
RPL28-209ENST00000560055 MTRF1O75570 445 aaKnown RBP14.18□□□□□ -0.14
RPL28-209ENST00000560055 LY6G6DO95868 133 aa14.18□□□□□ -0.14
RPL28-209ENST00000560055 MYF6P23409 242 aa14.18□□□□□ -0.14
RPL28-209ENST00000560055 HSPA13P48723 471 aa14.18□□□□□ -0.14
RPL28-209ENST00000560055 CHN2P52757 468 aa14.18□□□□□ -0.14
RPL28-209ENST00000560055 RIPPLY1Q0D2K3 151 aa14.18□□□□□ -0.14
RPL28-209ENST00000560055 PRDX4Q13162 271 aa14.18□□□□□ -0.14
RPL28-209ENST00000560055 MPPED2Q15777 294 aa14.18□□□□□ -0.14
RPL28-209ENST00000560055 PRAMEF6Q5VXH4 476 aa14.18□□□□□ -0.14
RPL28-209ENST00000560055 TMEM42Q69YG0 159 aa14.18□□□□□ -0.14
RPL28-209ENST00000560055 WDR86Q86TI4 376 aa14.18□□□□□ -0.14
RPL28-209ENST00000560055 MOGAT3Q86VF5 341 aa14.18□□□□□ -0.14
RPL28-209ENST00000560055 ZNF420Q8TAQ5 688 aaPredicted RBP14.18□□□□□ -0.14
RPL28-209ENST00000560055 HPSE2Q8WWQ2 592 aa14.18□□□□□ -0.14
RPL28-209ENST00000560055 HPS1Q92902 700 aa14.18□□□□□ -0.14
RPL28-209ENST00000560055 FGF23Q9GZV9 251 aaPredicted RBP14.18□□□□□ -0.14
RPL28-209ENST00000560055 ABCB9Q9NP78 766 aa14.18□□□□□ -0.14
RPL28-209ENST00000560055 FKBP14Q9NWM8 211 aa14.18□□□□□ -0.14
RPL28-209ENST00000560055 FRRS1LQ9P0K9 344 aa14.18□□□□□ -0.14
RPL28-209ENST00000560055 NPTNQ9Y639 398 aa14.18□□□□□ -0.14
RPL28-209ENST00000560055 FN1P02751 2386 aaKnown RBP14.18□□□□□ -0.14
RPL28-209ENST00000560055 ABCA2Q9BZC7 2435 aa14.17□□□□□ -0.14
RPL28-209ENST00000560055 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.17□□□□□ -0.149e-9■■■■□ 21.8
RPL28-209ENST00000560055 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.17□□□□□ -0.14
RPL28-209ENST00000560055 EFCAB10A6NFE3 127 aa14.17□□□□□ -0.14
RPL28-209ENST00000560055 ZNF850A8MQ14 1090 aa14.17□□□□□ -0.14
RPL28-209ENST00000560055 IGHV2-70P01814 119 aa14.17□□□□□ -0.14
RPL28-209ENST00000560055 HEXAP06865 529 aa14.17□□□□□ -0.14
RPL28-209ENST00000560055 UBCP0CG48 685 aaKnown RBP14.17□□□□□ -0.14
RPL28-209ENST00000560055 IGHV4-31P0DP07 118 aa14.17□□□□□ -0.14
RPL28-209ENST00000560055 IL2RGP31785 369 aa14.17□□□□□ -0.14
RPL28-209ENST00000560055 GNALP38405 381 aa14.17□□□□□ -0.14
RPL28-209ENST00000560055 VHLP40337 213 aa14.17□□□□□ -0.14
RPL28-209ENST00000560055 ETV1P50549 477 aa14.17□□□□□ -0.14
RPL28-209ENST00000560055 CCR9P51686 369 aa14.17□□□□□ -0.14
RPL28-209ENST00000560055 MVKQ03426 396 aa14.17□□□□□ -0.14
RPL28-209ENST00000560055 MZT1Q08AG7 82 aa14.17□□□□□ -0.14
RPL28-209ENST00000560055 AVPI1Q5T686 147 aa14.17□□□□□ -0.14
RPL28-209ENST00000560055 CLEC9AQ6UXN8 241 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms