RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 IFITM5A6NNB3 132 aa10.47□□□□□ -0.73
HERC1-205ENST00000559886 GMDSO60547 372 aa10.47□□□□□ -0.73
HERC1-205ENST00000559886 NKX6-1P78426 367 aaPredicted RBP10.47□□□□□ -0.73
HERC1-205ENST00000559886 SNTB1Q13884 538 aaKnown RBP10.47□□□□□ -0.73
HERC1-205ENST00000559886 UBE2V2Q15819 145 aa10.47□□□□□ -0.73
HERC1-205ENST00000559886 CLVS2Q5SYC1 327 aa10.47□□□□□ -0.73
HERC1-205ENST00000559886 NKAIN3Q8N8D7 197 aa10.47□□□□□ -0.73
HERC1-205ENST00000559886 LINC01560Q8TB33 94 aa10.47□□□□□ -0.73
HERC1-205ENST00000559886 KLF14Q8TD94 323 aaPredicted RBP10.47□□□□□ -0.73
HERC1-205ENST00000559886 AP3S1Q92572 193 aa10.47□□□□□ -0.73
HERC1-205ENST00000559886 HAVCR1Q96D42 359 aa10.47□□□□□ -0.73
HERC1-205ENST00000559886 NPDC1Q9NQX5 325 aaPredicted RBP10.47□□□□□ -0.73
HERC1-205ENST00000559886 DAPK2Q9UIK4 370 aa10.47□□□□□ -0.73
HERC1-205ENST00000559886 ATP6V1G2-DDX39BF2Z307 99 aa10.46□□□□□ -0.73
HERC1-205ENST00000559886 AIPO00170 330 aa10.46□□□□□ -0.73
HERC1-205ENST00000559886 ERCC1P07992 297 aaPredicted RBP10.46□□□□□ -0.73
HERC1-205ENST00000559886 ATF1P18846 271 aa10.46□□□□□ -0.73
HERC1-205ENST00000559886 CFPP27918 469 aa10.46□□□□□ -0.73
HERC1-205ENST00000559886 THBS2P35442 1172 aa10.46□□□□□ -0.73
HERC1-205ENST00000559886 BSPH1Q075Z2 132 aa10.46□□□□□ -0.73
HERC1-205ENST00000559886 SNTB2Q13425 540 aaKnown RBP10.46□□□□□ -0.73
HERC1-205ENST00000559886 IDNKQ5T6J7 187 aa10.46□□□□□ -0.73
HERC1-205ENST00000559886 LYPD6Q86Y78 171 aa10.46□□□□□ -0.73
HERC1-205ENST00000559886 UBASH3BQ8TF42 649 aa10.46□□□□□ -0.73
HERC1-205ENST00000559886 PIGTQ969N2 578 aa10.46□□□□□ -0.73
HERC1-205ENST00000559886 KCTD12Q96CX2 325 aaKnown RBP10.46□□□□□ -0.73
HERC1-205ENST00000559886 KCNN3Q9UGI6 736 aa10.46□□□□□ -0.73
HERC1-205ENST00000559886 RHBDD3Q9Y3P4 386 aa10.46□□□□□ -0.73
HERC1-205ENST00000559886 TUBAL3A6NHL2 446 aa10.46□□□□□ -0.74
HERC1-205ENST00000559886 TMEM127O75204 238 aa10.46□□□□□ -0.74
HERC1-205ENST00000559886 CST4P01036 141 aa10.46□□□□□ -0.74
HERC1-205ENST00000559886 NRASP01111 189 aa10.46□□□□□ -0.74
HERC1-205ENST00000559886 ALDOBP05062 364 aa10.46□□□□□ -0.74
HERC1-205ENST00000559886 SLC2A2P11168 524 aaPredicted RBP10.46□□□□□ -0.74
HERC1-205ENST00000559886 GLRXP35754 106 aa10.46□□□□□ -0.74
HERC1-205ENST00000559886 BMXP51813 675 aa10.46□□□□□ -0.74
HERC1-205ENST00000559886 PSG7Q13046 419 aa10.46□□□□□ -0.74
HERC1-205ENST00000559886 LSAMPQ13449 338 aa10.46□□□□□ -0.74
HERC1-205ENST00000559886 MBNL2Q5VZF2 373 aaKnown RBP10.46□□□□□ -0.74
HERC1-205ENST00000559886 GLT8D1Q68CQ7 371 aa10.46□□□□□ -0.74
HERC1-205ENST00000559886 OR2T2Q6IF00 324 aa10.46□□□□□ -0.74
HERC1-205ENST00000559886 FTMTQ8N4E7 242 aa10.46□□□□□ -0.74
HERC1-205ENST00000559886 OR52N4Q8NGI2 321 aa10.46□□□□□ -0.74
HERC1-205ENST00000559886 SSC4DQ8WTU2 575 aa10.46□□□□□ -0.74
HERC1-205ENST00000559886 ABCD4O14678 606 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 PRF1P14222 555 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 MPV17P39210 176 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 ZNF718Q3SXZ3 478 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 DDI2Q5TDH0 399 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 FAM166AQ6J272 317 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 RGS7BPQ6MZT1 257 aaPredicted RBP10.45□□□□□ -0.74
HERC1-205ENST00000559886 LINC00299Q6ZSB3 139 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 CDH26Q8IXH8 852 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 TBC1D15Q8TC07 691 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 ACOT12Q8WYK0 555 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 PIGCQ92535 297 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 FOXRED1Q96CU9 486 aaPredicted RBP10.45□□□□□ -0.74
HERC1-205ENST00000559886 TSC22D3Q99576 134 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 C6orf62Q9GZU0 229 aaPredicted RBP10.45□□□□□ -0.74
HERC1-205ENST00000559886 ESRP2Q9H6T0 727 aaKnown RBP10.45□□□□□ -0.74
HERC1-205ENST00000559886 PPP1R3EQ9H7J1 279 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 GPR173Q9NS66 373 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 CRIM1Q9NZV1 1036 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 IQCF6A8MYZ5 107 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 SLC17A2O00624 439 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 LILRA1O75019 489 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 SELEP16581 610 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 DYNC1I2Q13409 638 aaKnown RBP10.45□□□□□ -0.74
HERC1-205ENST00000559886 DMRTC1Q5HYR2 192 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 TMEM255AQ5JRV8 349 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 NCMAPQ5T1S8 102 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 HES5Q5TA89 166 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 PIAS4Q8N2W9 510 aaPredicted RBP10.45□□□□□ -0.74
HERC1-205ENST00000559886 BHLHE23Q8NDY6 225 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 NUP37Q8NFH4 326 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 SPSB1Q96BD6 273 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 RADILQ96JH8 1075 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 TECTBQ96PL2 329 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 PAPOLGQ9BWT3 736 aaKnown RBP10.45□□□□□ -0.74
HERC1-205ENST00000559886 METTL17Q9H7H0 456 aaPredicted RBP10.45□□□□□ -0.74
HERC1-205ENST00000559886 SMURF1Q9HCE7 757 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 CGGBP1Q9UFW8 167 aaPredicted RBP10.45□□□□□ -0.74
HERC1-205ENST00000559886 MYO18BQ8IUG5 2567 aa10.45□□□□□ -0.74
HERC1-205ENST00000559886 CTDSP2O14595 271 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 MAGEB3O15480 346 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 ZNF250P15622 560 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 KITLGP21583 273 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 AZGP1P25311 298 aaKnown RBP10.44□□□□□ -0.74
HERC1-205ENST00000559886 GCH1P30793 250 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 FABP6P51161 128 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 RPS23P62266 143 aaKnown RBP10.44□□□□□ -0.74
HERC1-205ENST00000559886 CNN3Q15417 329 aaKnown RBP10.44□□□□□ -0.74
HERC1-205ENST00000559886 C1orf100Q5SVJ3 147 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 JAGN1Q8N5M9 183 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 OR6Q1Q8NGQ2 317 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 TMEM171Q8WVE6 324 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 UQCC2Q9BRT2 126 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 PLGRKTQ9HBL7 147 aa10.44□□□□□ -0.74
HERC1-205ENST00000559886 MRPL15Q9P015 296 aaKnown RBP10.44□□□□□ -0.74
HERC1-205ENST00000559886 ABRACLQ9P1F3 81 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms