RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 MRPS11P82912 194 aaKnown RBP8.58□□□□□ -1.04
USP3-216ENST00000559873 MVKQ03426 396 aa8.58□□□□□ -1.04
USP3-216ENST00000559873 SLC3A1Q07837 685 aa8.58□□□□□ -1.04
USP3-216ENST00000559873 SPHARQ15513 63 aa8.58□□□□□ -1.04
USP3-216ENST00000559873 MED22Q15528 200 aa8.58□□□□□ -1.04
USP3-216ENST00000559873 TBCEQ15813 527 aaPredicted RBP8.58□□□□□ -1.04
USP3-216ENST00000559873 TSTQ16762 297 aaKnown RBP8.58□□□□□ -1.04
USP3-216ENST00000559873 KCTD21Q4G0X4 260 aa8.58□□□□□ -1.04
USP3-216ENST00000559873 Q5PR19 223 aa8.58□□□□□ -1.04
USP3-216ENST00000559873 PRSS57Q6UWY2 283 aa8.58□□□□□ -1.04
USP3-216ENST00000559873 ZDHHC23Q8IYP9 409 aa8.58□□□□□ -1.04
USP3-216ENST00000559873 CELF2-AS1Q8N7Q2 184 aa8.58□□□□□ -1.04
USP3-216ENST00000559873 NANOGP1Q8N7R0 232 aa8.58□□□□□ -1.04
USP3-216ENST00000559873 PLPP7Q8NBV4 271 aa8.58□□□□□ -1.04
USP3-216ENST00000559873 OR10AD1Q8NGE0 317 aa8.58□□□□□ -1.04
USP3-216ENST00000559873 TSEN15Q8WW01 171 aaKnown RBP8.58□□□□□ -1.04
USP3-216ENST00000559873 THRSPQ92748 146 aa8.58□□□□□ -1.04
USP3-216ENST00000559873 LYZL4Q96KX0 146 aa8.58□□□□□ -1.04
USP3-216ENST00000559873 NEK6Q9HC98 313 aa8.58□□□□□ -1.04
USP3-216ENST00000559873 DLL4Q9NR61 685 aa8.58□□□□□ -1.04
USP3-216ENST00000559873 PAK1IP1Q9NWT1 392 aaPredicted RBP8.58□□□□□ -1.04
USP3-216ENST00000559873 FRRS1LQ9P0K9 344 aa8.58□□□□□ -1.04
USP3-216ENST00000559873 ERVK-18Q9QC07 812 aa8.58□□□□□ -1.04
USP3-216ENST00000559873 DHDHQ9UQ10 334 aa8.58□□□□□ -1.04
USP3-216ENST00000559873 PIGLQ9Y2B2 252 aa8.58□□□□□ -1.04
USP3-216ENST00000559873 LRRC42Q9Y546 428 aa8.58□□□□□ -1.04
USP3-216ENST00000559873 V9GYS6 101 aa8.58□□□□□ -1.04
USP3-216ENST00000559873 MYO9AB2RTY4 2548 aa8.58□□□□□ -1.04
USP3-216ENST00000559873 TACC2O95359 2948 aa8.58□□□□□ -1.04
USP3-216ENST00000559873 A0A1B0GWJ7 208 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 LRRC30A6NM36 301 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 IFNL4K9M1U5 179 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 NDUFS8O00217 210 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 SSX4O60224 188 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 CD2P06729 351 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 OCM2P0CE71 109 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 OCMP0CE72 109 aaPredicted RBP8.57□□□□□ -1.04
USP3-216ENST00000559873 DAOP14920 347 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 CD200P41217 278 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 MAGEB1P43366 347 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 CCL8P80075 99 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 ACSM1Q08AH1 577 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 PRDX4Q13162 271 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 IRF3Q14653 427 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 CARTPTQ16568 116 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 TMEM255AQ5JRV8 349 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 CLVS2Q5SYC1 327 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 Q6ZR03 302 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 ZNF367Q7RTV3 350 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 OR13C3Q8NGS6 347 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 UBASH3BQ8TF42 649 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 PP6455Q8WZ26 134 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 FCGR1BQ92637 280 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 GTF3AQ92664 365 aaKnown RBP8.57□□□□□ -1.04
USP3-216ENST00000559873 RDH5Q92781 318 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 HPS1Q92902 700 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 ERGIC1Q969X5 290 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 OR2V2Q96R30 315 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 PIMREGQ9BSJ6 248 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 RTL8AQ9BWD3 113 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 CXXC4Q9H2H0 198 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 VCX3AQ9NNX9 186 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 ITGB1BP2Q9UKP3 347 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 ZNF281Q9Y2X9 895 aa8.57□□□□□ -1.04
USP3-216ENST00000559873 IGHV1-69-2A0A0G2JMI3 117 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 A0A1B0GTI1 187 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 ANKRD61A6NGH8 418 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 OR5B21A6NL26 309 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 TMEM210A6NLX4 147 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 ZNF850A8MQ14 1090 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 E9PI62 339 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 MLNRO43193 412 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 NCR1O76036 304 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 ZFPL1O95159 310 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 HPXP02790 462 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 HLA-DPB1P04440 258 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 CD1AP06126 327 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 IRF2P14316 349 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 FAHP16930 419 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 ACKR3P25106 362 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 GATA4P43694 442 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 GTF2A1P52655 376 aaPredicted RBP8.56□□□□□ -1.04
USP3-216ENST00000559873 CHN2P52757 468 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 MLLT11Q13015 90 aaPredicted RBP8.56□□□□□ -1.04
USP3-216ENST00000559873 CNN3Q15417 329 aaKnown RBP8.56□□□□□ -1.04
USP3-216ENST00000559873 CLEC12BQ2HXU8 276 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 HFEQ30201 348 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 YIF1BQ5BJH7 314 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 PLCXD3Q63HM9 321 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 ZNF773Q6PK81 442 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 Q6ZSR3 168 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 KRT74Q7RTS7 529 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 PEG10Q86TG7 708 aaKnown RBP8.56□□□□□ -1.04
USP3-216ENST00000559873 C1orf87Q8N0U7 546 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 ZCCHC24Q8N2G6 241 aaKnown RBP8.56□□□□□ -1.04
USP3-216ENST00000559873 ZNF485Q8NCK3 441 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 OR11L1Q8NGX0 322 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 OR14K1Q8NGZ2 314 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 GPR148Q8TDV2 347 aa8.56□□□□□ -1.04
USP3-216ENST00000559873 PIGCQ92535 297 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms