RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 TMEM158Q8WZ71 300 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 MRPL48Q96GC5 212 aaKnown RBP3.68□□□□□ -1.82
SNX1-205ENST00000559339 HRASLS5Q96KN8 279 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 Q96MT0 163 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 OR8B4Q96RC9 309 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 OR8B2Q96RD0 313 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 SIGLEC11Q96RL6 698 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 AMELYQ99218 206 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 MICU1Q9BPX6 476 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 OCSTAMPQ9BR26 566 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 MRI1Q9BV20 369 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 ADI1Q9BV57 179 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 RTL8AQ9BWD3 113 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 SSBP3Q9BWW4 388 aaPredicted RBP3.68□□□□□ -1.82
SNX1-205ENST00000559339 PBOV1Q9GZY1 135 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 C7orf69Q9H7B7 122 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 RNPEPL1Q9HAU8 725 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 PATZ1Q9HBE1 687 aaKnown RBP3.68□□□□□ -1.82
SNX1-205ENST00000559339 S100A14Q9HCY8 104 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 C8orf4Q9NR00 106 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 CLN6Q9NWW5 311 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 USE1Q9NZ43 259 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 ERVK-18Q9QC07 812 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 RNF7Q9UBF6 113 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 CLN8Q9UBY8 286 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 LRCH1Q9Y2L9 728 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 PCDHGB1Q9Y5G3 927 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 GMPPBQ9Y5P6 360 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 MPC1Q9Y5U8 109 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 SNX5Q9Y5X3 404 aa3.68□□□□□ -1.82
SNX1-205ENST00000559339 A0A0A6YYJ9 748 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 A0A1W2PQL4 384 aaPredicted RBP3.67□□□□□ -1.82
SNX1-205ENST00000559339 DAPL1A0PJW8 107 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 CCDC182A6NF36 153 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 OOEPA6NGQ2 149 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 METTL15A6NJ78 407 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 TMEM210A6NLX4 147 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 ZNF850A8MQ14 1090 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 CEACAM18A8MTB9 384 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 LOC110117498-PIK3R3F6TDL0 507 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 H3BNX3 289 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 M0R129 80 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 CDIPTO14735 213 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 TMPRSS2O15393 492 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 PHF1O43189 567 aaPredicted RBP3.67□□□□□ -1.82
SNX1-205ENST00000559339 TCF21O43680 179 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 FAM20BO75063 409 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 DHRS3O75911 302 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 PTBP3O95758 552 aaKnown RBP3.67□□□□□ -1.82
SNX1-205ENST00000559339 FADS2O95864 444 aaKnown RBP3.67□□□□□ -1.82
SNX1-205ENST00000559339 SERPINA3P01011 423 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 LIPFP07098 398 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 RPSAP08865 295 aaKnown RBP3.67□□□□□ -1.82
SNX1-205ENST00000559339 WNT2P09544 360 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 MUC1P15941 1255 aaPredicted RBP3.67□□□□□ -1.82
SNX1-205ENST00000559339 ZNF12P17014 697 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 FPR2P25090 351 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 MTNR1AP48039 350 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 PITPNBP48739 271 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 HCCSP53701 268 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 ACTA2P62736 377 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 ACTG2P63267 376 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 RIPPLY1Q0D2K3 151 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 PRDX4Q13162 271 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 MPPED2Q15777 294 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 OCLNQ16625 522 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 ZSCAN26Q16670 478 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 C11orf91Q3C1V1 193 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 CEACAM21Q3KPI0 293 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 ZIK1Q3SY52 487 aaPredicted RBP3.67□□□□□ -1.82
SNX1-205ENST00000559339 ZNF404Q494X3 552 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 SPRNQ5BIV9 151 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 ARMCX4Q5H9R4 360 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 SLC25A30Q5SVS4 291 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 ZNF684Q5T5D7 378 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 ZBTB37Q5TC79 503 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 PRAMEF6Q5VXH4 476 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 CD276Q5ZPR3 534 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 SFRP4Q6FHJ7 346 aaPredicted RBP3.67□□□□□ -1.82
SNX1-205ENST00000559339 RBMS3Q6XE24 437 aaKnown RBP3.67□□□□□ -1.82
SNX1-205ENST00000559339 PLEKHG7Q6ZR37 379 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 DCDC5Q6ZRR9 648 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 IL17RELQ6ZVW7 336 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 SLC36A1Q7Z2H8 476 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 BCDIN3DQ7Z5W3 292 aaKnown RBP3.67□□□□□ -1.82
SNX1-205ENST00000559339 KCTD20Q7Z5Y7 419 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 PRIMA1Q86XR5 153 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 ZDHHC23Q8IYP9 409 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 PQLC1Q8N2U9 271 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 GALNT4Q8N4A0 578 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 RFLNBQ8N5W9 214 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 YIPF7Q8N8F6 280 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 BOLLQ8N9W6 283 aaKnown RBP3.67□□□□□ -1.82
SNX1-205ENST00000559339 OR1M1Q8NGA1 313 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 OR8B12Q8NGG6 310 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 OR5A2Q8NGI9 324 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 OR51E1Q8TCB6 317 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 ZNF418Q8TF45 676 aaPredicted RBP3.67□□□□□ -1.82
SNX1-205ENST00000559339 PIGCQ92535 297 aa3.67□□□□□ -1.82
SNX1-205ENST00000559339 DVL3Q92997 716 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms