RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 PRDX4Q13162 271 aa15.73■□□□□ 0.11
CASC4-209ENST00000559222 CDONQ4KMG0 1287 aa15.73■□□□□ 0.11
CASC4-209ENST00000559222 WDR38Q5JTN6 314 aa15.73■□□□□ 0.11
CASC4-209ENST00000559222 CYB5R2Q6BCY4 276 aa15.73■□□□□ 0.11
CASC4-209ENST00000559222 LHFPL3Q86UP9 236 aa15.73■□□□□ 0.11
CASC4-209ENST00000559222 COMMD2Q86X83 199 aa15.73■□□□□ 0.11
CASC4-209ENST00000559222 HPSE2Q8WWQ2 592 aa15.73■□□□□ 0.11
CASC4-209ENST00000559222 LPAR2Q9HBW0 351 aa15.73■□□□□ 0.11
CASC4-209ENST00000559222 ARHGAP32A7KAX9 2087 aa15.72■□□□□ 0.11
CASC4-209ENST00000559222 A6NIN4 97 aa15.72■□□□□ 0.11
CASC4-209ENST00000559222 PTBP3O95758 552 aaKnown RBP15.72■□□□□ 0.11
CASC4-209ENST00000559222 IGHV2-5P01817 119 aa15.72■□□□□ 0.11
CASC4-209ENST00000559222 IGHA1P01876 353 aa15.72■□□□□ 0.11
CASC4-209ENST00000559222 GRPP07492 148 aa15.72■□□□□ 0.11
CASC4-209ENST00000559222 FAHP16930 419 aa15.72■□□□□ 0.11
CASC4-209ENST00000559222 THBS2P35442 1172 aa15.72■□□□□ 0.11
CASC4-209ENST00000559222 GZMKP49863 264 aa15.72■□□□□ 0.11
CASC4-209ENST00000559222 CDH15P55291 814 aa15.72■□□□□ 0.11
CASC4-209ENST00000559222 NANOS3P60323 173 aaKnown RBP15.72■□□□□ 0.11
CASC4-209ENST00000559222 CSNK2BP67870 215 aa15.72■□□□□ 0.11
CASC4-209ENST00000559222 ACTC1P68032 377 aa15.72■□□□□ 0.11
CASC4-209ENST00000559222 ACTA1P68133 377 aa15.72■□□□□ 0.11
CASC4-209ENST00000559222 TTC23Q5W5X9 447 aa15.72■□□□□ 0.11
CASC4-209ENST00000559222 ACBD7Q8N6N7 88 aa15.72■□□□□ 0.11
CASC4-209ENST00000559222 PIGCQ92535 297 aa15.72■□□□□ 0.11
CASC4-209ENST00000559222 RAB1CQ92928 201 aa15.72■□□□□ 0.11
CASC4-209ENST00000559222 ITPKCQ96DU7 683 aa15.72■□□□□ 0.11
CASC4-209ENST00000559222 C1orf159Q96HA4 380 aa15.72■□□□□ 0.11
CASC4-209ENST00000559222 Q96MT0 163 aa15.72■□□□□ 0.11
CASC4-209ENST00000559222 SLC22A4Q9H015 551 aa15.72■□□□□ 0.11
CASC4-209ENST00000559222 METTL17Q9H7H0 456 aaPredicted RBP15.72■□□□□ 0.11
CASC4-209ENST00000559222 ZNF665Q9H7R5 613 aa15.72■□□□□ 0.11
CASC4-209ENST00000559222 MOB1AQ9H8S9 216 aa15.72■□□□□ 0.11
CASC4-209ENST00000559222 ISG20L2Q9H9L3 353 aaKnown RBP15.72■□□□□ 0.11
CASC4-209ENST00000559222 SNX5Q9Y5X3 404 aa15.72■□□□□ 0.11
CASC4-209ENST00000559222 SULT1C4O75897 302 aa15.71■□□□□ 0.11
CASC4-209ENST00000559222 HOXB4P17483 251 aaPredicted RBP15.71■□□□□ 0.11
CASC4-209ENST00000559222 EGR1P18146 543 aa15.71■□□□□ 0.11
CASC4-209ENST00000559222 CD80P33681 288 aa15.71■□□□□ 0.11
CASC4-209ENST00000559222 BTG1P62324 171 aa15.71■□□□□ 0.11
CASC4-209ENST00000559222 C11orf53Q8IXP5 236 aa15.71■□□□□ 0.11
CASC4-209ENST00000559222 CELF2-AS1Q8N7Q2 184 aa15.71■□□□□ 0.11
CASC4-209ENST00000559222 CSNK2A3Q8NEV1 391 aa15.71■□□□□ 0.11
CASC4-209ENST00000559222 PELI1Q96FA3 418 aa15.71■□□□□ 0.11
CASC4-209ENST00000559222 TIMD4Q96H15 378 aa15.71■□□□□ 0.11
CASC4-209ENST00000559222 C4orf36Q96KX1 117 aa15.71■□□□□ 0.11
CASC4-209ENST00000559222 GAL3ST1Q99999 423 aa15.71■□□□□ 0.11
CASC4-209ENST00000559222 ALG8Q9BVK2 526 aa15.71■□□□□ 0.11
CASC4-209ENST00000559222 MRPS18AQ9NVS2 196 aaKnown RBP15.71■□□□□ 0.11
CASC4-209ENST00000559222 C1orf123Q9NWV4 160 aa15.71■□□□□ 0.11
CASC4-209ENST00000559222 UBAP1Q9NZ09 502 aa15.71■□□□□ 0.11
CASC4-209ENST00000559222 SONP18583 2426 aaKnown RBP15.7■□□□□ 0.1
CASC4-209ENST00000559222 DNHD1Q96M86 4753 aa15.7■□□□□ 0.1
CASC4-209ENST00000559222 J3QLW9 94 aa15.7■□□□□ 0.1
CASC4-209ENST00000559222 CST4P01036 141 aa15.7■□□□□ 0.1
CASC4-209ENST00000559222 TGFAP01135 160 aa15.7■□□□□ 0.1
CASC4-209ENST00000559222 ZNF19P17023 458 aa15.7■□□□□ 0.1
CASC4-209ENST00000559222 SEC61A1P61619 476 aaKnown RBP15.7■□□□□ 0.1
CASC4-209ENST00000559222 SLC3A1Q07837 685 aa15.7■□□□□ 0.1
CASC4-209ENST00000559222 CEP78Q5JTW2 689 aa15.7■□□□□ 0.1
CASC4-209ENST00000559222 IL17RELQ6ZVW7 336 aa15.7■□□□□ 0.1
CASC4-209ENST00000559222 FAM220AQ7Z4H9 259 aa15.7■□□□□ 0.1
CASC4-209ENST00000559222 RDH10Q8IZV5 341 aa15.7■□□□□ 0.1
CASC4-209ENST00000559222 PLPP7Q8NBV4 271 aa15.7■□□□□ 0.1
CASC4-209ENST00000559222 OR14K1Q8NGZ2 314 aa15.7■□□□□ 0.1
CASC4-209ENST00000559222 OR8S1Q8NH09 359 aa15.7■□□□□ 0.1
CASC4-209ENST00000559222 Q8TCH9 128 aa15.7■□□□□ 0.1
CASC4-209ENST00000559222 HPS1Q92902 700 aa15.7■□□□□ 0.1
CASC4-209ENST00000559222 ERVK13-1Q9NX77 482 aa15.7■□□□□ 0.1
CASC4-209ENST00000559222 ZNF391Q9UJN7 358 aa15.7■□□□□ 0.1
CASC4-209ENST00000559222 PIGLQ9Y2B2 252 aa15.7■□□□□ 0.1
CASC4-209ENST00000559222 RPL36Q9Y3U8 105 aaKnown RBP15.7■□□□□ 0.1
CASC4-209ENST00000559222 V9GYS6 101 aa15.7■□□□□ 0.1
CASC4-209ENST00000559222 ZNF816-ZNF321PA0A0X1KG74 233 aa15.69■□□□□ 0.1
CASC4-209ENST00000559222 A6NLC8 198 aa15.69■□□□□ 0.1
CASC4-209ENST00000559222 SNTNA6NMZ2 147 aa15.69■□□□□ 0.1
CASC4-209ENST00000559222 A8MV72 311 aaPredicted RBP15.69■□□□□ 0.1
CASC4-209ENST00000559222 E9PI62 339 aa15.69■□□□□ 0.1
CASC4-209ENST00000559222 H0YAE9 185 aa15.69■□□□□ 0.1
CASC4-209ENST00000559222 H0YHG0 523 aa15.69■□□□□ 0.1
CASC4-209ENST00000559222 DHRS3O75911 302 aa15.69■□□□□ 0.1
CASC4-209ENST00000559222 LIMS3P0CW19 117 aa15.69■□□□□ 0.1
CASC4-209ENST00000559222 LIMS4P0CW20 117 aa15.69■□□□□ 0.1
CASC4-209ENST00000559222 GNALP38405 381 aa15.69■□□□□ 0.1
CASC4-209ENST00000559222 MAP2K3P46734 347 aa15.69■□□□□ 0.1
CASC4-209ENST00000559222 RAB40BQ12829 278 aa15.69■□□□□ 0.1
CASC4-209ENST00000559222 ZNF154Q13106 437 aa15.69■□□□□ 0.1
CASC4-209ENST00000559222 GALEQ14376 348 aa15.69■□□□□ 0.1
CASC4-209ENST00000559222 BOLLQ8N9W6 283 aaKnown RBP15.69■□□□□ 0.1
CASC4-209ENST00000559222 LINC01356Q8N9X3 169 aa15.69■□□□□ 0.1
CASC4-209ENST00000559222 SEMA6DQ8NFY4 1073 aa15.69■□□□□ 0.1
CASC4-209ENST00000559222 OR1M1Q8NGA1 313 aa15.69■□□□□ 0.1
CASC4-209ENST00000559222 OR2G2Q8NGZ5 317 aa15.69■□□□□ 0.1
CASC4-209ENST00000559222 OR10AC1Q8NH08 325 aa15.69■□□□□ 0.1
CASC4-209ENST00000559222 FBLIM1Q8WUP2 373 aa15.69■□□□□ 0.1
CASC4-209ENST00000559222 OR5P3Q8WZ94 311 aa15.69■□□□□ 0.1
CASC4-209ENST00000559222 TFAP2CQ92754 450 aa15.69■□□□□ 0.1
CASC4-209ENST00000559222 FRRS1LQ9P0K9 344 aa15.69■□□□□ 0.1
CASC4-209ENST00000559222 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.68■□□□□ 0.1
CASC4-209ENST00000559222 XPNPEP2O43895 674 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms