RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 RSG1Q9BU20 258 aa6.59□□□□□ -1.35
CASC4-208ENST00000559151 TREX1Q9NSU2 369 aa6.59□□□□□ -1.35
CASC4-208ENST00000559151 NECAP2Q9NVZ3 263 aa6.59□□□□□ -1.35
CASC4-208ENST00000559151 URB2Q14146 1524 aaKnown RBP6.59□□□□□ -1.35
CASC4-208ENST00000559151 DFFAO00273 331 aa6.58□□□□□ -1.36
CASC4-208ENST00000559151 TAAR5O14804 337 aa6.58□□□□□ -1.36
CASC4-208ENST00000559151 C5orf47Q569G3 176 aa6.58□□□□□ -1.36
CASC4-208ENST00000559151 C6orf183Q5T699 404 aa6.58□□□□□ -1.36
CASC4-208ENST00000559151 OPN5Q6U736 354 aa6.58□□□□□ -1.36
CASC4-208ENST00000559151 DAW1Q8N136 415 aa6.58□□□□□ -1.36
CASC4-208ENST00000559151 FAM58AQ8N1B3 248 aa6.58□□□□□ -1.36
CASC4-208ENST00000559151 PDCL2Q8N4E4 241 aa6.58□□□□□ -1.36
CASC4-208ENST00000559151 ESR2Q92731 530 aa6.58□□□□□ -1.36
CASC4-208ENST00000559151 CDS1Q92903 461 aa6.58□□□□□ -1.36
CASC4-208ENST00000559151 TM6SF2Q9BZW4 377 aa6.58□□□□□ -1.36
CASC4-208ENST00000559151 FANCD2Q9BXW9 1451 aa6.58□□□□□ -1.36
CASC4-208ENST00000559151 PCM1Q15154 2024 aa6.57□□□□□ -1.36
CASC4-208ENST00000559151 OR5H1A6NKK0 313 aa6.57□□□□□ -1.36
CASC4-208ENST00000559151 IGHV3-11P01762 117 aa6.57□□□□□ -1.36
CASC4-208ENST00000559151 MUC1P15941 1255 aaPredicted RBP6.57□□□□□ -1.36
CASC4-208ENST00000559151 NPY1RP25929 384 aa6.57□□□□□ -1.36
CASC4-208ENST00000559151 PSMC5P62195 406 aa6.57□□□□□ -1.36
CASC4-208ENST00000559151 XIAPP98170 497 aa6.57□□□□□ -1.36
CASC4-208ENST00000559151 C16orf87Q6PH81 154 aa6.57□□□□□ -1.36
CASC4-208ENST00000559151 ZNF461Q8TAF7 563 aa6.57□□□□□ -1.36
CASC4-208ENST00000559151 RDH12Q96NR8 316 aa6.57□□□□□ -1.36
CASC4-208ENST00000559151 GABRG3Q99928 467 aa6.57□□□□□ -1.36
CASC4-208ENST00000559151 CHRNA10Q9GZZ6 450 aa6.57□□□□□ -1.36
CASC4-208ENST00000559151 C1orf198Q9H425 327 aa6.57□□□□□ -1.36
CASC4-208ENST00000559151 PTPRTO14522 1441 aa6.57□□□□□ -1.36
CASC4-208ENST00000559151 KDM6BO15054 1643 aa6.57□□□□□ -1.36
CASC4-208ENST00000559151 SBNO1A3KN83 1393 aa6.57□□□□□ -1.36
CASC4-208ENST00000559151 DOCK9Q9BZ29 2069 aa6.56□□□□□ -1.36
CASC4-208ENST00000559151 IGLV4-60A0A075B6I1 120 aa6.56□□□□□ -1.36
CASC4-208ENST00000559151 A0A0A6YYD5 115 aa6.56□□□□□ -1.36
CASC4-208ENST00000559151 IGHV3-72A0A0B4J1Y9 119 aa6.56□□□□□ -1.36
CASC4-208ENST00000559151 LINC01619G3V211 115 aa6.56□□□□□ -1.36
CASC4-208ENST00000559151 CCNE2O96020 404 aa6.56□□□□□ -1.36
CASC4-208ENST00000559151 PTHP01270 115 aa6.56□□□□□ -1.36
CASC4-208ENST00000559151 IGLV3-25P01717 112 aa6.56□□□□□ -1.36
CASC4-208ENST00000559151 TRBV12-3P01733 135 aa6.56□□□□□ -1.36
CASC4-208ENST00000559151 SLC35B1P78383 322 aa6.56□□□□□ -1.36
CASC4-208ENST00000559151 IFITM3Q01628 133 aa6.56□□□□□ -1.36
CASC4-208ENST00000559151 KDSRQ06136 332 aa6.56□□□□□ -1.36
CASC4-208ENST00000559151 ATP6V1FQ16864 119 aa6.56□□□□□ -1.36
CASC4-208ENST00000559151 TMPRSS11AQ6ZMR5 421 aa6.56□□□□□ -1.36
CASC4-208ENST00000559151 TTLQ8NG68 377 aa6.56□□□□□ -1.36
CASC4-208ENST00000559151 OR6K6Q8NGW6 343 aa6.56□□□□□ -1.36
CASC4-208ENST00000559151 TMEM234Q8WY98 164 aa6.56□□□□□ -1.36
CASC4-208ENST00000559151 RNF170Q96K19 258 aa6.56□□□□□ -1.36
CASC4-208ENST00000559151 C18orf15Q96N68 181 aa6.56□□□□□ -1.36
CASC4-208ENST00000559151 CDX2Q99626 313 aaPredicted RBP6.56□□□□□ -1.36
CASC4-208ENST00000559151 KCNS3Q9BQ31 491 aa6.56□□□□□ -1.36
CASC4-208ENST00000559151 TMEM175Q9BSA9 504 aa6.56□□□□□ -1.36
CASC4-208ENST00000559151 SIGLEC9Q9Y336 463 aa6.56□□□□□ -1.36
CASC4-208ENST00000559151 PEG3Q9GZU2 1588 aa6.56□□□□□ -1.36
CASC4-208ENST00000559151 GAPVD1Q14C86 1478 aa6.55□□□□□ -1.36
CASC4-208ENST00000559151 IGKV2-28A0A075B6P5 120 aa6.55□□□□□ -1.36
CASC4-208ENST00000559151 EIF1BO60739 113 aaKnown RBP6.55□□□□□ -1.36
CASC4-208ENST00000559151 IGKV2D-28P01615 120 aa6.55□□□□□ -1.36
CASC4-208ENST00000559151 ME2P23368 584 aa6.55□□□□□ -1.36
CASC4-208ENST00000559151 EIF1P41567 113 aaKnown RBP6.55□□□□□ -1.36
CASC4-208ENST00000559151 TMEM236Q5W0B7 351 aa6.55□□□□□ -1.36
CASC4-208ENST00000559151 KDM4DQ6B0I6 523 aa6.55□□□□□ -1.36
CASC4-208ENST00000559151 MDP1Q86V88 176 aa6.55□□□□□ -1.36
CASC4-208ENST00000559151 OR4K3Q96R72 315 aa6.55□□□□□ -1.36
CASC4-208ENST00000559151 RNF5Q99942 180 aa6.55□□□□□ -1.36
CASC4-208ENST00000559151 ARV1Q9H2C2 271 aa6.55□□□□□ -1.36
CASC4-208ENST00000559151 KLF12Q9Y4X4 402 aa6.55□□□□□ -1.36
CASC4-208ENST00000559151 IGHV7-4-1A0A0J9YVY3 117 aa6.54□□□□□ -1.36
CASC4-208ENST00000559151 BET1O15155 118 aa6.54□□□□□ -1.36
CASC4-208ENST00000559151 SMC2O95347 1197 aa6.54□□□□□ -1.36
CASC4-208ENST00000559151 PAHP00439 452 aa6.54□□□□□ -1.36
CASC4-208ENST00000559151 HCCSP53701 268 aa6.54□□□□□ -1.36
CASC4-208ENST00000559151 ATP5J2P56134 94 aa6.54□□□□□ -1.36
CASC4-208ENST00000559151 EIF4EBP2Q13542 120 aaPredicted RBP6.54□□□□□ -1.36
CASC4-208ENST00000559151 C6orf99Q4VX62 202 aa6.54□□□□□ -1.36
CASC4-208ENST00000559151 STEAP4Q687X5 459 aa6.54□□□□□ -1.36
CASC4-208ENST00000559151 CACNG8Q8WXS5 425 aa6.54□□□□□ -1.36
CASC4-208ENST00000559151 OR51B5Q9H339 312 aa6.54□□□□□ -1.36
CASC4-208ENST00000559151 PRO0461Q9UI25 63 aa6.54□□□□□ -1.36
CASC4-208ENST00000559151 TSPOAP1O95153 1857 aa6.53□□□□□ -1.36
CASC4-208ENST00000559151 EIF4G3O43432 1585 aaKnown RBP6.53□□□□□ -1.36
CASC4-208ENST00000559151 GOLGA8JA6NMD2 632 aa6.53□□□□□ -1.36
CASC4-208ENST00000559151 HLA-DQB1P01920 261 aa6.53□□□□□ -1.36
CASC4-208ENST00000559151 PRB2P02812 416 aaPredicted RBP6.53□□□□□ -1.36
CASC4-208ENST00000559151 MT-ND4P03905 459 aa6.53□□□□□ -1.36
CASC4-208ENST00000559151 S100A9P06702 114 aaKnown RBP6.53□□□□□ -1.36
CASC4-208ENST00000559151 GOLGA8HP0CJ92 632 aa6.53□□□□□ -1.36
CASC4-208ENST00000559151 CDC20Q12834 499 aa6.53□□□□□ -1.36
CASC4-208ENST00000559151 NAB1Q13506 487 aa6.53□□□□□ -1.36
CASC4-208ENST00000559151 CPTPQ5TA50 214 aa6.53□□□□□ -1.36
CASC4-208ENST00000559151 OR4M1Q8NGD0 313 aa6.53□□□□□ -1.36
CASC4-208ENST00000559151 CENPNQ96H22 339 aaPredicted RBP6.53□□□□□ -1.36
CASC4-208ENST00000559151 EMC6Q9BV81 110 aa6.53□□□□□ -1.36
CASC4-208ENST00000559151 GGA2Q9UJY4 613 aa6.53□□□□□ -1.36
CASC4-208ENST00000559151 SIGLEC7Q9Y286 467 aa6.53□□□□□ -1.36
CASC4-208ENST00000559151 CLASP1Q7Z460 1538 aa6.53□□□□□ -1.36
CASC4-208ENST00000559151 CABIN1Q9Y6J0 2220 aa6.53□□□□□ -1.36
CASC4-208ENST00000559151 IFT140Q96RY7 1462 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms