RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 CPOQ8IVL8 374 aa9.34□□□□□ -0.91
CHRNA3-205ENST00000559080 FTMTQ8N4E7 242 aa9.34□□□□□ -0.91
CHRNA3-205ENST00000559080 BOLLQ8N9W6 283 aaKnown RBP9.34□□□□□ -0.91
CHRNA3-205ENST00000559080 PLPP7Q8NBV4 271 aa9.34□□□□□ -0.91
CHRNA3-205ENST00000559080 OTOSQ8NHW6 89 aa9.34□□□□□ -0.91
CHRNA3-205ENST00000559080 THEM6Q8WUY1 208 aa9.34□□□□□ -0.91
CHRNA3-205ENST00000559080 SPSB4Q96A44 273 aa9.34□□□□□ -0.91
CHRNA3-205ENST00000559080 TMEM246Q9BRR3 403 aa9.34□□□□□ -0.91
CHRNA3-205ENST00000559080 MMADHCQ9H3L0 296 aaPredicted RBP9.34□□□□□ -0.91
CHRNA3-205ENST00000559080 PRDM13Q9H4Q3 707 aa9.34□□□□□ -0.91
CHRNA3-205ENST00000559080 BRD7Q9NPI1 651 aa9.34□□□□□ -0.91
CHRNA3-205ENST00000559080 TRIM36Q9NQ86 728 aa9.34□□□□□ -0.91
CHRNA3-205ENST00000559080 RNF7Q9UBF6 113 aa9.34□□□□□ -0.91
CHRNA3-205ENST00000559080 TET2Q6N021 2002 aaPredicted RBP9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 hCG_38984A0A1B0GV85 526 aa9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 FAM181BA6NEQ2 426 aa9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 PHYHO14832 338 aa9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 HOXA3O43365 443 aaPredicted RBP9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 GRPP07492 148 aa9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 CD80P33681 288 aa9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 GNALP38405 381 aa9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 CRISP1P54107 249 aa9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 PSMA6P60900 246 aaKnown RBP9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 FAM3AP98173 230 aa9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 PAX2Q02962 417 aa9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 APOFQ13790 326 aa9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 OR8B8Q15620 311 aa9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 SNAPC1Q16533 368 aa9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 TMEM236Q5W0B7 351 aa9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 OLFML2AQ68BL7 652 aa9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 FAHD1Q6P587 224 aa9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 C17orf107Q6ZR85 190 aa9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 PARP8Q8N3A8 854 aa9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 C19orf18Q8NEA5 215 aa9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 CSNK2A3Q8NEV1 391 aa9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 BBS1Q8NFJ9 593 aa9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 TECTBQ96PL2 329 aa9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 AMELYQ99218 206 aa9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 RBM4BQ9BQ04 359 aaKnown RBP9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 PAPOLGQ9BWT3 736 aaKnown RBP9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 RGCCQ9H4X1 137 aa9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 KRT84Q9NSB2 600 aa9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 C1orf123Q9NWV4 160 aa9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 TVP23BQ9NYZ1 205 aa9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 CLN8Q9UBY8 286 aa9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 LAMP5Q9UJQ1 280 aa9.33□□□□□ -0.92
CHRNA3-205ENST00000559080 IGHV3OR16-10A0A075B7F0 116 aa9.32□□□□□ -0.92
CHRNA3-205ENST00000559080 TRAV38-1A0A0B4J264 116 aa9.32□□□□□ -0.92
CHRNA3-205ENST00000559080 IGHV2-70DA0A0C4DH43 119 aa9.32□□□□□ -0.92
CHRNA3-205ENST00000559080 ANXA2P2A6NMY6 339 aa9.32□□□□□ -0.92
CHRNA3-205ENST00000559080 M0QZ24 198 aa9.32□□□□□ -0.92
CHRNA3-205ENST00000559080 LGALS8O00214 317 aa9.32□□□□□ -0.92
CHRNA3-205ENST00000559080 CIB2O75838 187 aa9.32□□□□□ -0.92
CHRNA3-205ENST00000559080 ALX3O95076 343 aa9.32□□□□□ -0.92
CHRNA3-205ENST00000559080 PTBP3O95758 552 aaKnown RBP9.32□□□□□ -0.92
CHRNA3-205ENST00000559080 FCGR1AP12314 374 aa9.32□□□□□ -0.92
CHRNA3-205ENST00000559080 SLC2A5P22732 501 aa9.32□□□□□ -0.92
CHRNA3-205ENST00000559080 MTNR1AP48039 350 aa9.32□□□□□ -0.92
CHRNA3-205ENST00000559080 ESRRGP62508 458 aa9.32□□□□□ -0.92
CHRNA3-205ENST00000559080 ATP6AP1Q15904 470 aa9.32□□□□□ -0.92
CHRNA3-205ENST00000559080 BRICD5Q6PL45 260 aa9.32□□□□□ -0.92
CHRNA3-205ENST00000559080 LRRN1Q6UXK5 716 aa9.32□□□□□ -0.92
CHRNA3-205ENST00000559080 PRSS45Q7RTY3 260 aa9.32□□□□□ -0.92
CHRNA3-205ENST00000559080 KRT77Q7Z794 578 aa9.32□□□□□ -0.92
CHRNA3-205ENST00000559080 OR5K1Q8NHB7 308 aa9.32□□□□□ -0.92
CHRNA3-205ENST00000559080 UTP4Q969X6 686 aaKnown RBP9.32□□□□□ -0.92
CHRNA3-205ENST00000559080 SGK3Q96BR1 496 aa9.32□□□□□ -0.92
CHRNA3-205ENST00000559080 UPRTQ96BW1 309 aa9.32□□□□□ -0.92
CHRNA3-205ENST00000559080 NIPAL2Q9H841 368 aa9.32□□□□□ -0.92
CHRNA3-205ENST00000559080 BEX1Q9HBH7 125 aa9.32□□□□□ -0.92
CHRNA3-205ENST00000559080 C1RLQ9NZP8 487 aa9.32□□□□□ -0.92
CHRNA3-205ENST00000559080 ENOPH1Q9UHY7 261 aa9.32□□□□□ -0.92
CHRNA3-205ENST00000559080 ZNF391Q9UJN7 358 aa9.32□□□□□ -0.92
CHRNA3-205ENST00000559080 CLPSL1A2RUU4 121 aa9.31□□□□□ -0.92
CHRNA3-205ENST00000559080 OOEPA6NGQ2 149 aa9.31□□□□□ -0.92
CHRNA3-205ENST00000559080 C3orf80F5H4A9 247 aa9.31□□□□□ -0.92
CHRNA3-205ENST00000559080 G3V2T6 193 aa9.31□□□□□ -0.92
CHRNA3-205ENST00000559080 TIMM23O14925 209 aa9.31□□□□□ -0.92
CHRNA3-205ENST00000559080 MRPL3P09001 348 aaKnown RBP9.31□□□□□ -0.92
CHRNA3-205ENST00000559080 PPIAL4GP0DN37 164 aa9.31□□□□□ -0.92
CHRNA3-205ENST00000559080 FASP25445 335 aa9.31□□□□□ -0.92
CHRNA3-205ENST00000559080 GSK3AP49840 483 aa9.31□□□□□ -0.92
CHRNA3-205ENST00000559080 NPY4RP50391 375 aa9.31□□□□□ -0.92
CHRNA3-205ENST00000559080 DAPP51397 102 aa9.31□□□□□ -0.92
CHRNA3-205ENST00000559080 RAG2P55895 527 aa9.31□□□□□ -0.92
CHRNA3-205ENST00000559080 IL5RAQ01344 420 aa9.31□□□□□ -0.92
CHRNA3-205ENST00000559080 PTGES3Q15185 160 aaKnown RBP9.31□□□□□ -0.92
CHRNA3-205ENST00000559080 WDR25Q64LD2 544 aaPredicted RBP9.31□□□□□ -0.92
CHRNA3-205ENST00000559080 SFRP4Q6FHJ7 346 aaPredicted RBP9.31□□□□□ -0.92
CHRNA3-205ENST00000559080 KCTD18Q6PI47 426 aaPredicted RBP9.31□□□□□ -0.92
CHRNA3-205ENST00000559080 ZDHHC13Q8IUH4 622 aa9.31□□□□□ -0.92
CHRNA3-205ENST00000559080 OR4F5Q8NH21 305 aa9.31□□□□□ -0.92
CHRNA3-205ENST00000559080 FAM81AQ8TBF8 368 aa9.31□□□□□ -0.92
CHRNA3-205ENST00000559080 RAB40AQ8WXH6 277 aa9.31□□□□□ -0.92
CHRNA3-205ENST00000559080 DACT3Q96B18 629 aaPredicted RBP9.31□□□□□ -0.92
CHRNA3-205ENST00000559080 CNN2Q99439 309 aaKnown RBP9.31□□□□□ -0.92
CHRNA3-205ENST00000559080 MICU1Q9BPX6 476 aa9.31□□□□□ -0.92
CHRNA3-205ENST00000559080 YIPF3Q9GZM5 350 aa9.31□□□□□ -0.92
CHRNA3-205ENST00000559080 ABCB9Q9NP78 766 aa9.31□□□□□ -0.92
CHRNA3-205ENST00000559080 ERVK-18Q9QC07 812 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms