RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	ZNF620	Q6ZNG0	422 aa		5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	KLB	Q86Z14	1044 aa		5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	TEX29	Q8N6K0	151 aa		5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	BOLL	Q8N9W6	283 aa	Known RBP	5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	CYB561A3	Q8NBI2	242 aa		5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	ZNF555	Q8NEP9	628 aa		5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	SDR9C7	Q8NEX9	313 aa		5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	GJC3	Q8NFK1	279 aa		5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	OR52E2	Q8NGJ4	325 aa		5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	OR51L1	Q8NGJ5	315 aa		5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	OR5L1	Q8NGL2	311 aa		5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	OR13G1	Q8NGZ3	307 aa		5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	ZNRF4	Q8WWF5	429 aa		5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	APOBEC3D	Q96AK3	386 aa	Predicted RBP	5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	C1orf147	Q96MC9	270 aa	Predicted RBP	5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	ZNF582	Q96NG8	517 aa	Predicted RBP	5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	ZNF184	Q99676	751 aa	Predicted RBP	5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	PITX2	Q99697	317 aa		5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	COQ7	Q99807	217 aa		5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	SLC30A2	Q9BRI3	323 aa		5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	TMEM246	Q9BRR3	403 aa		5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	PRRG3	Q9BZD7	231 aa		5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	TOR3A	Q9H497	397 aa		5.84	□□□□□ -1.47
MARK3-215	ENST00000558787		Q9H521	79 aa		5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	EGLN3	Q9H6Z9	239 aa		5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	TUBG2	Q9NRH3	451 aa		5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	DDX28	Q9NUL7	540 aa	Known RBP	5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	UFSP2	Q9NUQ7	469 aa		5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	TBC1D23	Q9NUY8	699 aa		5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	TMEM100	Q9NV29	134 aa		5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	MRPL22	Q9NWU5	206 aa	Known RBP	5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	NUP50	Q9UKX7	468 aa		5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	BAIAP2	Q9UQB8	552 aa		5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	PCDHGB1	Q9Y5G3	927 aa		5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	N6AMT1	Q9Y5N5	214 aa		5.84	□□□□□ -1.47
MARK3-215	ENST00000558787	PPIAL4E	A0A075B759	164 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	PPIAL4C	A0A0B4J2A2	164 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	MDFIC2	A0A1B0GVS7	189 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	IQCF6	A8MYZ5	107 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	PPIAL4D	F5H284	164 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787		H0YAE9	185 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	SPRY1	O43609	319 aa	Predicted RBP	5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	MITF	O75030	526 aa	Predicted RBP	5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	FAM20B	O75063	409 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	REN	P00797	406 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	PLA2G1B	P04054	148 aa	Known RBP	5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	PPIAL4F	P0DN26	164 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	RPS2	P15880	293 aa	Known RBP	5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	CA6	P23280	308 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	CAPG	P40121	348 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	SRP9	P49458	86 aa	Known RBP	5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	RGS6	P49758	472 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	CRISP1	P54107	249 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	AQP4	P55087	323 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	CDC42	P60953	191 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	PAX2	Q02962	417 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	PAX8	Q06710	450 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	BAMBI	Q13145	260 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	MAB21L1	Q13394	359 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	IL18R1	Q13478	541 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	MPPED2	Q15777	294 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	KRTAP27-1	Q3LI81	207 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	SLC36A3	Q495N2	470 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	DNM1P34	Q6PK57	102 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	RBMS3	Q6XE24	437 aa	Known RBP	5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	COLCA1	Q6ZS62	124 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	DOK3	Q7L591	496 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	DHRSX	Q8N5I4	330 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	OR2T33	Q8NG76	320 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	OR10S1	Q8NGN2	331 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	OR2AJ1	Q8NGZ0	328 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	COG8	Q96MW5	612 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	MBOAT4	Q96T53	435 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	SPATA25	Q9BR10	227 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	MRI1	Q9BV20	369 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	ADI1	Q9BV57	179 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	SSBP3	Q9BWW4	388 aa	Predicted RBP	5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	HCAR1	Q9BXC0	346 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	HDHD2	Q9H0R4	259 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	RIBC2	Q9H4K1	309 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	PNRC2	Q9NPJ4	139 aa	Known RBP	5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	IL20	Q9NYY1	176 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	OR5V1	Q9UGF6	321 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	CYB5R1	Q9UHQ9	305 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	RAB26	Q9ULW5	256 aa		5.83	□□□□□ -1.48
MARK3-215	ENST00000558787	LOC100130705	A0A1B0GUX0	176 aa		5.82	□□□□□ -1.48
MARK3-215	ENST00000558787	ZAR1L	A6NP61	321 aa		5.82	□□□□□ -1.48
MARK3-215	ENST00000558787		A8MXK9	166 aa		5.82	□□□□□ -1.48
MARK3-215	ENST00000558787	DLGAP1	O14490	977 aa		5.82	□□□□□ -1.48
MARK3-215	ENST00000558787	ARPC3	O15145	178 aa		5.82	□□□□□ -1.48
MARK3-215	ENST00000558787	SLC16A6	O15403	523 aa		5.82	□□□□□ -1.48
MARK3-215	ENST00000558787	IDH3B	O43837	385 aa		5.82	□□□□□ -1.48
MARK3-215	ENST00000558787	SOX14	O95416	240 aa		5.82	□□□□□ -1.48
MARK3-215	ENST00000558787	IFNG	P01579	166 aa		5.82	□□□□□ -1.48
MARK3-215	ENST00000558787	HMGN1	P05114	100 aa		5.82	□□□□□ -1.48
MARK3-215	ENST00000558787	SLC2A1	P11166	492 aa		5.82	□□□□□ -1.48
MARK3-215	ENST00000558787	OMG	P23515	440 aa		5.82	□□□□□ -1.48
MARK3-215	ENST00000558787	PRTN3	P24158	256 aa		5.82	□□□□□ -1.48
MARK3-215	ENST00000558787	POU1F1	P28069	291 aa		5.82	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms