RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 C4orf36Q96KX1 117 aa13.12□□□□□ -0.31
LINC01220-201ENST00000558575 OPA3Q9H6K4 179 aa13.12□□□□□ -0.31
LINC01220-201ENST00000558575 GPR84Q9NQS5 396 aa13.12□□□□□ -0.31
LINC01220-201ENST00000558575 FRRS1LQ9P0K9 344 aa13.12□□□□□ -0.31
LINC01220-201ENST00000558575 RAB26Q9ULW5 256 aa13.12□□□□□ -0.31
LINC01220-201ENST00000558575 RHBDD3Q9Y3P4 386 aa13.12□□□□□ -0.31
LINC01220-201ENST00000558575 CACNG2Q9Y698 323 aa13.12□□□□□ -0.31
LINC01220-201ENST00000558575 VWC2LB2RUY7 222 aa13.11□□□□□ -0.31
LINC01220-201ENST00000558575 F5H5P2 479 aa13.11□□□□□ -0.31
LINC01220-201ENST00000558575 P2RY10O00398 339 aa13.11□□□□□ -0.31
LINC01220-201ENST00000558575 CDC14BO60729 498 aa13.11□□□□□ -0.31
LINC01220-201ENST00000558575 TACSTD2P09758 323 aa13.11□□□□□ -0.31
LINC01220-201ENST00000558575 PIPP12273 146 aaPredicted RBP13.11□□□□□ -0.31
LINC01220-201ENST00000558575 CFL1P23528 166 aaKnown RBP13.11□□□□□ -0.31
LINC01220-201ENST00000558575 C21orf33P30042 268 aaPredicted RBP13.11□□□□□ -0.31
LINC01220-201ENST00000558575 CRYBB2P43320 205 aa13.11□□□□□ -0.31
LINC01220-201ENST00000558575 TNFAIP6P98066 277 aaPredicted RBP13.11□□□□□ -0.31
LINC01220-201ENST00000558575 MAB21L1Q13394 359 aa13.11□□□□□ -0.31
LINC01220-201ENST00000558575 DOC2BQ14184 412 aa13.11□□□□□ -0.31
LINC01220-201ENST00000558575 Q6ZSR3 168 aa13.11□□□□□ -0.31
LINC01220-201ENST00000558575 KRT74Q7RTS7 529 aa13.11□□□□□ -0.31
LINC01220-201ENST00000558575 EGFL6Q8IUX8 553 aa13.11□□□□□ -0.31
LINC01220-201ENST00000558575 SYS1Q8N2H4 156 aa13.11□□□□□ -0.31
LINC01220-201ENST00000558575 ZNF485Q8NCK3 441 aa13.11□□□□□ -0.31
LINC01220-201ENST00000558575 RDH5Q92781 318 aa13.11□□□□□ -0.31
LINC01220-201ENST00000558575 DIRC2Q96SL1 478 aa13.11□□□□□ -0.31
LINC01220-201ENST00000558575 PAK1IP1Q9NWT1 392 aaPredicted RBP13.11□□□□□ -0.31
LINC01220-201ENST00000558575 CNOT2Q9NZN8 540 aaKnown RBP13.11□□□□□ -0.31
LINC01220-201ENST00000558575 MRPL15Q9P015 296 aaKnown RBP13.11□□□□□ -0.31
LINC01220-201ENST00000558575 IRGMA1A4Y4 181 aa13.1□□□□□ -0.31
LINC01220-201ENST00000558575 EFCAB10A6NFE3 127 aa13.1□□□□□ -0.31
LINC01220-201ENST00000558575 SLC1A7O00341 560 aa13.1□□□□□ -0.31
LINC01220-201ENST00000558575 ERCC1P07992 297 aaPredicted RBP13.1□□□□□ -0.31
LINC01220-201ENST00000558575 PDLIM4P50479 330 aa13.1□□□□□ -0.31
LINC01220-201ENST00000558575 MRPS11P82912 194 aaKnown RBP13.1□□□□□ -0.31
LINC01220-201ENST00000558575 RIN1Q13671 783 aa13.1□□□□□ -0.31
LINC01220-201ENST00000558575 ZMAT1Q5H9K5 638 aa13.1□□□□□ -0.31
LINC01220-201ENST00000558575 BCL2L15Q5TBC7 163 aa13.1□□□□□ -0.31
LINC01220-201ENST00000558575 OR2G6Q5TZ20 316 aa13.1□□□□□ -0.31
LINC01220-201ENST00000558575 AHSA2Q719I0 299 aa13.1□□□□□ -0.31
LINC01220-201ENST00000558575 RDH10Q8IZV5 341 aa13.1□□□□□ -0.31
LINC01220-201ENST00000558575 ITLN1Q8WWA0 313 aa13.1□□□□□ -0.31
LINC01220-201ENST00000558575 FAM168AQ92567 244 aa13.1□□□□□ -0.31
LINC01220-201ENST00000558575 DVL3Q92997 716 aaPredicted RBP13.1□□□□□ -0.31
LINC01220-201ENST00000558575 FAM71F1Q96KD3 344 aaPredicted RBP13.1□□□□□ -0.31
LINC01220-201ENST00000558575 OR2V2Q96R30 315 aa13.1□□□□□ -0.31
LINC01220-201ENST00000558575 ZNF184Q99676 751 aaPredicted RBP13.1□□□□□ -0.31
LINC01220-201ENST00000558575 MOB1AQ9H8S9 216 aa13.1□□□□□ -0.31
LINC01220-201ENST00000558575 DECR2Q9NUI1 292 aa13.1□□□□□ -0.31
LINC01220-201ENST00000558575 TMEM160Q9NX00 188 aa13.1□□□□□ -0.31
LINC01220-201ENST00000558575 DCAF16Q9NXF7 216 aa13.1□□□□□ -0.31
LINC01220-201ENST00000558575 UBAP1Q9NZ09 502 aa13.1□□□□□ -0.31
LINC01220-201ENST00000558575 TREM2Q9NZC2 230 aa13.1□□□□□ -0.31
LINC01220-201ENST00000558575 IL19Q9UHD0 177 aa13.1□□□□□ -0.31
LINC01220-201ENST00000558575 ZNF391Q9UJN7 358 aa13.1□□□□□ -0.31
LINC01220-201ENST00000558575 GTF2A1LQ9UNN4 478 aa13.1□□□□□ -0.31
LINC01220-201ENST00000558575 IGHV3-64DA0A0J9YX35 117 aa13.09□□□□□ -0.31
LINC01220-201ENST00000558575 LOC390937A0A1W2PQ73 354 aa13.09□□□□□ -0.31
LINC01220-201ENST00000558575 OR4C45A6NMZ5 311 aa13.09□□□□□ -0.31
LINC01220-201ENST00000558575 LALBAP00709 142 aa13.09□□□□□ -0.31
LINC01220-201ENST00000558575 CCL1P22362 96 aa13.09□□□□□ -0.31
LINC01220-201ENST00000558575 GIFP27352 417 aa13.09□□□□□ -0.31
LINC01220-201ENST00000558575 PMELP40967 661 aa13.09□□□□□ -0.31
LINC01220-201ENST00000558575 GTF2A1P52655 376 aaPredicted RBP13.09□□□□□ -0.31
LINC01220-201ENST00000558575 DSCR9P59020 149 aa13.09□□□□□ -0.31
LINC01220-201ENST00000558575 ACTA2P62736 377 aa13.09□□□□□ -0.31
LINC01220-201ENST00000558575 ACTG2P63267 376 aa13.09□□□□□ -0.31
LINC01220-201ENST00000558575 CSNK2BP67870 215 aa13.09□□□□□ -0.31
LINC01220-201ENST00000558575 CARTPTQ16568 116 aa13.09□□□□□ -0.31
LINC01220-201ENST00000558575 ODF4Q2M2E3 257 aa13.09□□□□□ -0.31
LINC01220-201ENST00000558575 XAF1Q6GPH4 301 aa13.09□□□□□ -0.31
LINC01220-201ENST00000558575 CLEC2AQ6UVW9 174 aa13.09□□□□□ -0.31
LINC01220-201ENST00000558575 FAM220AQ7Z4H9 259 aa13.09□□□□□ -0.31
LINC01220-201ENST00000558575 OR14K1Q8NGZ2 314 aa13.09□□□□□ -0.31
LINC01220-201ENST00000558575 MEGF10Q96KG7 1140 aa13.09□□□□□ -0.31
LINC01220-201ENST00000558575 CNBD2Q96M20 576 aa13.09□□□□□ -0.31
LINC01220-201ENST00000558575 FGF23Q9GZV9 251 aaPredicted RBP13.09□□□□□ -0.31
LINC01220-201ENST00000558575 DUSP21Q9H596 190 aa13.09□□□□□ -0.31
LINC01220-201ENST00000558575 SAP30LQ9HAJ7 183 aa13.09□□□□□ -0.31
LINC01220-201ENST00000558575 MYOZ1Q9NP98 299 aaPredicted RBP13.09□□□□□ -0.31
LINC01220-201ENST00000558575 CAB39Q9Y376 341 aaPredicted RBP13.09□□□□□ -0.31
LINC01220-201ENST00000558575 EXOSC1Q9Y3B2 195 aaKnown RBP13.09□□□□□ -0.31
LINC01220-201ENST00000558575 SIRT4Q9Y6E7 314 aaPredicted RBP13.09□□□□□ -0.31
LINC01220-201ENST00000558575 IGHV1-69-2A0A0G2JMI3 117 aa13.08□□□□□ -0.32
LINC01220-201ENST00000558575 LOC100289279A0A1B0GTE1 492 aa13.08□□□□□ -0.32
LINC01220-201ENST00000558575 PTGES3LE9PB15 166 aa13.08□□□□□ -0.32
LINC01220-201ENST00000558575 H3BSH0 61 aa13.08□□□□□ -0.32
LINC01220-201ENST00000558575 TPD52L2O43399 206 aaKnown RBP13.08□□□□□ -0.32
LINC01220-201ENST00000558575 DENRO43583 198 aaKnown RBP13.08□□□□□ -0.32
LINC01220-201ENST00000558575 LMX1BO60663 402 aa13.08□□□□□ -0.32
LINC01220-201ENST00000558575 CST4P01036 141 aa13.08□□□□□ -0.32
LINC01220-201ENST00000558575 ACHEP22303 614 aa13.08□□□□□ -0.32
LINC01220-201ENST00000558575 CFPP27918 469 aa13.08□□□□□ -0.32
LINC01220-201ENST00000558575 MAP2K3P46734 347 aa13.08□□□□□ -0.32
LINC01220-201ENST00000558575 CCR9P51686 369 aa13.08□□□□□ -0.32
LINC01220-201ENST00000558575 SLC35A2P78381 396 aa13.08□□□□□ -0.32
LINC01220-201ENST00000558575 ALKBH1Q13686 389 aaKnown RBP13.08□□□□□ -0.32
LINC01220-201ENST00000558575 SNCBQ16143 134 aa13.08□□□□□ -0.32
LINC01220-201ENST00000558575 TMEM249Q2WGJ8 235 aa13.08□□□□□ -0.32
LINC01220-201ENST00000558575 ZNF540Q8NDQ6 660 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms