RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 PRSS45Q7RTY3 260 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 ABHD12BQ7Z5M8 362 aaPredicted RBP3.58□□□□□ -1.84
SPG11-211ENST00000558561 SPATA24Q86W54 205 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 ZDHHC23Q8IYP9 409 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 AQP11Q8NBQ7 271 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 SLC37A3Q8NCC5 494 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 SLC30A7Q8NEW0 376 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 BBS1Q8NFJ9 593 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 OR9Q1Q8NGQ5 310 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 OR1J1Q8NGS3 322 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 OR2T29Q8NH02 315 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 C10orf105Q8TEF2 133 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 MRPL24Q96A35 216 aaKnown RBP3.58□□□□□ -1.84
SPG11-211ENST00000558561 CMBLQ96DG6 245 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 URB1-AS1Q96HZ7 61 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 ZNF570Q96NI8 536 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 C1orf21Q9H246 121 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 SEMA6AQ9H2E6 1030 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 NARFLQ9H6Q4 476 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 B3GAT2Q9NPZ5 323 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 RPRD1BQ9NQG5 326 aaKnown RBP3.58□□□□□ -1.84
SPG11-211ENST00000558561 IL20Q9NYY1 176 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 PDP1Q9P0J1 537 aaPredicted RBP3.58□□□□□ -1.84
SPG11-211ENST00000558561 TAAR3PQ9P1P4 343 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 ZNF319Q9P2F9 582 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 KLHL21Q9UJP4 597 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 MGAT4BQ9UQ53 548 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 GRIP1Q9Y3R0 1128 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 N6AMT1Q9Y5N5 214 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 RPS10-NUDT3A0A1W2PQS6 291 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 ZSCAN5BA6NJL1 495 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 PRR32B1ATL7 298 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 TNFRSF13BO14836 293 aaPredicted RBP3.57□□□□□ -1.84
SPG11-211ENST00000558561 SPRY3O43610 288 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 SYNGR3O43761 229 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 GMNNO75496 209 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 KHDRBS3O75525 346 aaKnown RBP3.57□□□□□ -1.84
SPG11-211ENST00000558561 CCNB2O95067 398 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 UBL3O95164 117 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 RAB36O95755 333 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 TOMM40O96008 361 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 HLA-DPB1P04440 258 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 CST2P09228 141 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 IGHV4-31P0DP07 118 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 SLC2A1P11166 492 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 DAOP14920 347 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 ZNF250P15622 560 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 POU1F1P28069 291 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 PMELP40967 661 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 RASSF2P50749 326 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 DAP3P51398 398 aaKnown RBP3.57□□□□□ -1.84
SPG11-211ENST00000558561 MMP15P51511 669 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 EFNA4P52798 201 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 NUDT6P53370 316 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 CDH15P55291 814 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 SH3BGRP55822 239 aaPredicted RBP3.57□□□□□ -1.84
SPG11-211ENST00000558561 HIST1H3AP68431 136 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 ELF3P78545 371 aaPredicted RBP3.57□□□□□ -1.84
SPG11-211ENST00000558561 CCL8P80075 99 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 HSF2Q03933 536 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 TRAP1Q12931 704 aaKnown RBP3.57□□□□□ -1.84
SPG11-211ENST00000558561 CRMP1Q14194 572 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 GGTLC2Q14390 218 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 GINS1Q14691 196 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 JMJD1CQ15652 2540 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 EFNB3Q15768 340 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 SLC36A3Q495N2 470 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 FAM201AQ5SY85 155 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 AVPI1Q5T686 147 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 HIST2H3PS2Q5TEC6 136 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 DCAF12L2Q5VW00 463 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 TMEM53Q6P2H8 277 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.57□□□□□ -1.84
SPG11-211ENST00000558561 ZNF620Q6ZNG0 422 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 HIST2H3AQ71DI3 136 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 OR5AS1Q8N127 324 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 Q8N9P0 234 aaPredicted RBP3.57□□□□□ -1.84
SPG11-211ENST00000558561 PAPD5Q8NDF8 572 aaKnown RBP3.57□□□□□ -1.84
SPG11-211ENST00000558561 C19orf18Q8NEA5 215 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 NUP37Q8NFH4 326 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 SLC26A10Q8NG04 563 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 OR4F15Q8NGB8 312 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 OR10G2Q8NGC3 310 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 FANK1Q8TC84 345 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 KLF14Q8TD94 323 aaPredicted RBP3.57□□□□□ -1.84
SPG11-211ENST00000558561 GIPC3Q8TF64 312 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 MCUR1Q96AQ8 359 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 C4orf45Q96LM5 186 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 GPX7Q96SL4 187 aaPredicted RBP3.57□□□□□ -1.84
SPG11-211ENST00000558561 RHNO1Q9BSD3 238 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 ALG12Q9BV10 488 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 NMNAT2Q9BZQ4 307 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 TRIM15Q9C019 465 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 BPESC1Q9GZL8 116 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 ANKRD19PQ9H560 264 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 YAE1D1Q9NRH1 226 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 MRGBPQ9NV56 204 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 PTTG3PQ9NZH4 202 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 PEMTQ9UBM1 199 aa3.57□□□□□ -1.84
SPG11-211ENST00000558561 TMCC3Q9ULS5 477 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms