RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 REEP6Q96HR9 211 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 ADAT1Q9BUB4 502 aaKnown RBP8.44□□□□□ -1.06
USP3-207ENST00000558218 SSBP4Q9BWG4 385 aaPredicted RBP8.44□□□□□ -1.06
USP3-207ENST00000558218 PRRG3Q9BZD7 231 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 YIPF3Q9GZM5 350 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 MRPL18Q9H0U6 180 aaKnown RBP8.44□□□□□ -1.06
USP3-207ENST00000558218 PAPOLBQ9NRJ5 636 aaKnown RBP8.44□□□□□ -1.06
USP3-207ENST00000558218 ERVK-18Q9QC07 812 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 KAAG1Q9UBP8 84 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 ENOPH1Q9UHY7 261 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 MPC1Q9Y5U8 109 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 CUBNO60494 3623 aa8.44□□□□□ -1.06
USP3-207ENST00000558218 IGHV2-70DA0A0C4DH43 119 aa8.43□□□□□ -1.06
USP3-207ENST00000558218 TBX1O43435 398 aa8.43□□□□□ -1.06
USP3-207ENST00000558218 ZNF254O75437 659 aa8.43□□□□□ -1.06
USP3-207ENST00000558218 ECDO95905 644 aaPredicted RBP8.43□□□□□ -1.06
USP3-207ENST00000558218 CST4P01036 141 aa8.43□□□□□ -1.06
USP3-207ENST00000558218 SLC2A1P11166 492 aa8.43□□□□□ -1.06
USP3-207ENST00000558218 MUC1P15941 1255 aaPredicted RBP8.43□□□□□ -1.06
USP3-207ENST00000558218 SLC2A5P22732 501 aa8.43□□□□□ -1.06
USP3-207ENST00000558218 NAA10P41227 235 aaPredicted RBP8.43□□□□□ -1.06
USP3-207ENST00000558218 MTNR1AP48039 350 aa8.43□□□□□ -1.06
USP3-207ENST00000558218 ZNF121P58317 390 aaPredicted RBP8.43□□□□□ -1.06
USP3-207ENST00000558218 SRSF2Q01130 221 aaKnown RBP8.43□□□□□ -1.06
USP3-207ENST00000558218 IL5RAQ01344 420 aa8.43□□□□□ -1.06
USP3-207ENST00000558218 OR8B8Q15620 311 aa8.43□□□□□ -1.06
USP3-207ENST00000558218 TEX36Q5VZQ5 186 aa8.43□□□□□ -1.06
USP3-207ENST00000558218 WDR25Q64LD2 544 aaPredicted RBP8.43□□□□□ -1.06
USP3-207ENST00000558218 KCTD18Q6PI47 426 aaPredicted RBP8.43□□□□□ -1.06
USP3-207ENST00000558218 C12orf54Q6X4T0 127 aa8.43□□□□□ -1.06
USP3-207ENST00000558218 GALNT4Q8N4A0 578 aa8.43□□□□□ -1.06
USP3-207ENST00000558218 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.43□□□□□ -1.06
USP3-207ENST00000558218 OR8S1Q8NH09 359 aa8.43□□□□□ -1.06
USP3-207ENST00000558218 OR5K1Q8NHB7 308 aa8.43□□□□□ -1.06
USP3-207ENST00000558218 THEM6Q8WUY1 208 aa8.43□□□□□ -1.06
USP3-207ENST00000558218 DUS3LQ96G46 650 aaKnown RBP8.43□□□□□ -1.06
USP3-207ENST00000558218 MNTQ99583 582 aa8.43□□□□□ -1.06
USP3-207ENST00000558218 TEAD3Q99594 435 aa8.43□□□□□ -1.06
USP3-207ENST00000558218 CADM1Q9BY67 442 aaKnown RBP8.43□□□□□ -1.06
USP3-207ENST00000558218 MED20Q9H944 212 aa8.43□□□□□ -1.06
USP3-207ENST00000558218 UFSP2Q9NUQ7 469 aa8.43□□□□□ -1.06
USP3-207ENST00000558218 TMEM14AQ9Y6G1 99 aa8.43□□□□□ -1.06
USP3-207ENST00000558218 SVEP1Q4LDE5 3571 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 IGHV3-64DA0A0J9YX35 117 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 hCG_38984A0A1B0GV85 526 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 C5orf63A6NC05 138 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 OOEPA6NGQ2 149 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 ANXA2P2A6NMY6 339 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 CLDN34H7C241 214 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 ENSAO43768 121 aaKnown RBP8.42□□□□□ -1.06
USP3-207ENST00000558218 ZNF205O95201 554 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 GRPP07492 148 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 FCGR1AP12314 374 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 ATP6V1B1P15313 513 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 GNALP38405 381 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 EFNB1P98172 346 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 ROM1Q03395 351 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 PTGES3Q15185 160 aaKnown RBP8.42□□□□□ -1.06
USP3-207ENST00000558218 SNAPC1Q16533 368 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 KLHL12Q53G59 568 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 FAM76BQ5HYJ3 339 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 KLF17Q5JT82 389 aaPredicted RBP8.42□□□□□ -1.06
USP3-207ENST00000558218 PRAMEF6Q5VXH4 476 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 FAM57BQ71RH2 274 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 SPATC1Q76KD6 591 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 ZNF771Q7L3S4 317 aaPredicted RBP8.42□□□□□ -1.06
USP3-207ENST00000558218 HS3ST5Q8IZT8 346 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 GCSAMQ8N6F7 178 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 ZDHHC22Q8N966 263 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 ASB17Q8WXJ9 295 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 GCDHQ92947 438 aaPredicted RBP8.42□□□□□ -1.06
USP3-207ENST00000558218 C12orf43Q96C57 262 aaKnown RBP8.42□□□□□ -1.06
USP3-207ENST00000558218 ZMYND19Q96E35 227 aaPredicted RBP8.42□□□□□ -1.06
USP3-207ENST00000558218 PGAM5Q96HS1 289 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 SLC6A7Q99884 636 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 NUDT16L1Q9BRJ7 211 aaKnown RBP8.42□□□□□ -1.06
USP3-207ENST00000558218 OSBPL10Q9BXB5 764 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 MROQ9BYG7 248 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 MS4A7Q9GZW8 240 aaPredicted RBP8.42□□□□□ -1.06
USP3-207ENST00000558218 TLNRD1Q9H1K6 362 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 PRDM13Q9H4Q3 707 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 C1orf123Q9NWV4 160 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 ZNF319Q9P2F9 582 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 LAMP5Q9UJQ1 280 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 N6AMT1Q9Y5N5 214 aa8.42□□□□□ -1.06
USP3-207ENST00000558218 A0A0U1RQV5 110 aa8.41□□□□□ -1.06
USP3-207ENST00000558218 A6NLC8 198 aa8.41□□□□□ -1.06
USP3-207ENST00000558218 TMEM210A6NLX4 147 aa8.41□□□□□ -1.06
USP3-207ENST00000558218 G3V2T6 193 aa8.41□□□□□ -1.06
USP3-207ENST00000558218 PLATP00750 562 aa8.41□□□□□ -1.06
USP3-207ENST00000558218 PRTN3P24158 256 aa8.41□□□□□ -1.06
USP3-207ENST00000558218 FASP25445 335 aa8.41□□□□□ -1.06
USP3-207ENST00000558218 DAPP51397 102 aa8.41□□□□□ -1.06
USP3-207ENST00000558218 ACTR3P61158 418 aa8.41□□□□□ -1.06
USP3-207ENST00000558218 RPS7P62081 194 aaKnown RBP8.41□□□□□ -1.06
USP3-207ENST00000558218 ATP6AP1Q15904 470 aa8.41□□□□□ -1.06
USP3-207ENST00000558218 MICBQ29980 383 aa8.41□□□□□ -1.06
USP3-207ENST00000558218 FAM201AQ5SY85 155 aa8.41□□□□□ -1.06
USP3-207ENST00000558218 ATPAF1Q5TC12 328 aaPredicted RBP8.41□□□□□ -1.06
USP3-207ENST00000558218 ZBTB37Q5TC79 503 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms