RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 RAMP3O60896 148 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 ZNF324O75467 553 aaPredicted RBP2.01□□□□□ -2.09
SPG11-206ENST00000558093 UGT2B17O75795 530 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 CCNKO75909 580 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 CTDNEP1O95476 244 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 AP2A1O95782 977 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 CD160O95971 181 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 CA1P00915 261 aaPredicted RBP2.01□□□□□ -2.09
SPG11-206ENST00000558093 HLA-HP01893 362 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 SERPINA5P05154 406 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 PCCAP05165 728 aaPredicted RBP2.01□□□□□ -2.09
SPG11-206ENST00000558093 CALB1P05937 261 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 CD5P06127 495 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 KLK1P06870 262 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 UQCRHP07919 91 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 ICAM2P13598 275 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 TBXA2RP21731 343 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 WARSP23381 471 aaKnown RBP2.01□□□□□ -2.09
SPG11-206ENST00000558093 IVDP26440 423 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 HCAR3P49019 387 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 PRLHRP49683 370 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 CDK9P50750 372 aaKnown RBP2.01□□□□□ -2.09
SPG11-206ENST00000558093 DAP3P51398 398 aaKnown RBP2.01□□□□□ -2.09
SPG11-206ENST00000558093 FGF8P55075 233 aaPredicted RBP2.01□□□□□ -2.09
SPG11-206ENST00000558093 FAM3AP98173 230 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 MLLT11Q13015 90 aaPredicted RBP2.01□□□□□ -2.09
SPG11-206ENST00000558093 RAB31Q13636 194 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 TRIM16LQ309B1 348 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 TIGITQ495A1 244 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 AKIRIN2Q53H80 203 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 SPIN3Q5JUX0 258 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 PPM1LQ5SGD2 360 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 TIMM23BQ5SRD1 257 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 SDHAF4Q5VUM1 108 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 CERS6Q6ZMG9 384 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 ACOT7LQ6ZUV0 252 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 LYG2Q86SG7 212 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 MOB3BQ86TA1 216 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 LHFPL3Q86UP9 236 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 RALGPS2Q86X27 583 aaPredicted RBP2.01□□□□□ -2.09
SPG11-206ENST00000558093 DHFR2Q86XF0 187 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 BBS7Q8IWZ6 715 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 MREGQ8N565 214 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 ZNF561Q8N587 486 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 JAGN1Q8N5M9 183 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 TMEM35BQ8NCS4 154 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 CATSPER1Q8NEC5 780 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 ATP6V1C2Q8NEY4 427 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 PXT1Q8NFP0 134 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 OR4F6Q8NGB9 312 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 OR10A7Q8NGE5 316 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 OR5L2Q8NGL0 311 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 KIR2DL5BQ8NHK3 375 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 PLPPR1Q8TBJ4 325 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 TCTEX1D2Q8WW35 142 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 APH1BQ8WW43 257 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 PPWD1Q96BP3 646 aaKnown RBP2.01□□□□□ -2.09
SPG11-206ENST00000558093 FLYWCH2Q96CP2 140 aaKnown RBP2.01□□□□□ -2.09
SPG11-206ENST00000558093 CXorf40BQ96DE9 158 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 WDR34Q96EX3 536 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 CENPNQ96H22 339 aaPredicted RBP2.01□□□□□ -2.09
SPG11-206ENST00000558093 FAM210BQ96KR6 192 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 XPO6Q96QU8 1125 aaKnown RBP2.01□□□□□ -2.09
SPG11-206ENST00000558093 OR2M2Q96R28 347 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 NIPSNAP1Q9BPW8 284 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 PLA2G2FQ9BZM2 168 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 ACTR3CQ9C0K3 210 aaPredicted RBP2.01□□□□□ -2.09
SPG11-206ENST00000558093 POPDC2Q9HBU9 364 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 ISYNA1Q9NPH2 558 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 IFT46Q9NQC8 304 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 AGPAT4Q9NRZ5 378 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 FGFR1OP2Q9NVK5 253 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 GPATCH2LQ9NWQ4 482 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 B3GNT2Q9NY97 397 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 SIGLEC8Q9NYZ4 499 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 CCDC59Q9P031 241 aaKnown RBP2.01□□□□□ -2.09
SPG11-206ENST00000558093 NUP50Q9UKX7 468 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 NDUFAF1Q9Y375 327 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 FAM32AQ9Y421 112 aaKnown RBP2.01□□□□□ -2.09
SPG11-206ENST00000558093 SLC22A7Q9Y694 548 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 AQRO60306 1485 aaKnown RBP eCLIP2.01□□□□□ -2.09
SPG11-206ENST00000558093 SPEF2Q9C093 1822 aa2.01□□□□□ -2.09
SPG11-206ENST00000558093 PTPRGP23470 1445 aa2□□□□□ -2.09
SPG11-206ENST00000558093 NUP160Q12769 1436 aa2□□□□□ -2.09
SPG11-206ENST00000558093 EIF3AQ14152 1382 aaKnown RBP2□□□□□ -2.09
SPG11-206ENST00000558093 ABCB11O95342 1321 aa2□□□□□ -2.09
SPG11-206ENST00000558093 ADGRA3Q8IWK6 1321 aa2□□□□□ -2.09
SPG11-206ENST00000558093 YLPM1P49750 1951 aaKnown RBP2□□□□□ -2.09
SPG11-206ENST00000558093 IGLV2-33A0A075B6J2 118 aaPredicted RBP2□□□□□ -2.09
SPG11-206ENST00000558093 IGHV3OR16-13A0A075B7E8 117 aa2□□□□□ -2.09
SPG11-206ENST00000558093 TRBV9A0A0B4J1U6 114 aa2□□□□□ -2.09
SPG11-206ENST00000558093 A0A1B0GTI1 187 aa2□□□□□ -2.09
SPG11-206ENST00000558093 A0A1B0GV72 72 aa2□□□□□ -2.09
SPG11-206ENST00000558093 A0A1B0GVI7 797 aa2□□□□□ -2.09
SPG11-206ENST00000558093 A0A1W2PRF3 423 aa2□□□□□ -2.09
SPG11-206ENST00000558093 A0A1W2PRM7 423 aa2□□□□□ -2.09
SPG11-206ENST00000558093 ZNF233A6NK53 670 aa2□□□□□ -2.09
SPG11-206ENST00000558093 SLC22A20A6NK97 555 aa2□□□□□ -2.09
SPG11-206ENST00000558093 HIDE1A8MVS5 230 aa2□□□□□ -2.09
SPG11-206ENST00000558093 F5H768 121 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms