RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 KISS1Q15726 138 aa10.81□□□□□ -0.68
SHMT2-233ENST00000557529 UBE2V2Q15819 145 aa10.81□□□□□ -0.68
SHMT2-233ENST00000557529 RAB12Q6IQ22 244 aa10.81□□□□□ -0.68
SHMT2-233ENST00000557529 CCBE1Q6UXH8 406 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-233ENST00000557529 GFRALQ6UXV0 394 aa10.81□□□□□ -0.68
SHMT2-233ENST00000557529 MRPL21Q7Z2W9 205 aaKnown RBP10.81□□□□□ -0.68
SHMT2-233ENST00000557529 ZNF610Q8N9Z0 462 aa10.81□□□□□ -0.68
SHMT2-233ENST00000557529 FCAMRQ8WWV6 532 aa10.81□□□□□ -0.68
SHMT2-233ENST00000557529 YIPF5Q969M3 257 aa10.81□□□□□ -0.68
SHMT2-233ENST00000557529 ZNF75AQ96N20 296 aa10.81□□□□□ -0.68
SHMT2-233ENST00000557529 NKX3-1Q99801 234 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-233ENST00000557529 REPIN1Q9BWE0 567 aaKnown RBP10.81□□□□□ -0.68
SHMT2-233ENST00000557529 C11orf54Q9H0W9 315 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-233ENST00000557529 MOV10Q9HCE1 1003 aaKnown RBP10.81□□□□□ -0.68
SHMT2-233ENST00000557529 KCNN3Q9UGI6 736 aa10.81□□□□□ -0.68
SHMT2-233ENST00000557529 SPTBN4Q9H254 2564 aa10.8□□□□□ -0.68
SHMT2-233ENST00000557529 LYRM1O43325 122 aa10.8□□□□□ -0.68
SHMT2-233ENST00000557529 GMDSO60547 372 aa10.8□□□□□ -0.68
SHMT2-233ENST00000557529 NRASP01111 189 aa10.8□□□□□ -0.68
SHMT2-233ENST00000557529 CCL2P13500 99 aa10.8□□□□□ -0.68
SHMT2-233ENST00000557529 CBR1P16152 277 aa10.8□□□□□ -0.68
SHMT2-233ENST00000557529 ZNF14P17017 642 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-233ENST00000557529 ALDH3B1P43353 468 aa10.8□□□□□ -0.68
SHMT2-233ENST00000557529 RFX2P48378 723 aa10.8□□□□□ -0.68
SHMT2-233ENST00000557529 AP3S2P59780 193 aa10.8□□□□□ -0.68
SHMT2-233ENST00000557529 DGCR2P98153 550 aa10.8□□□□□ -0.68
SHMT2-233ENST00000557529 PMPCAQ10713 525 aa10.8□□□□□ -0.68
SHMT2-233ENST00000557529 PLA2G7Q13093 441 aa10.8□□□□□ -0.68
SHMT2-233ENST00000557529 TNK1Q13470 666 aa10.8□□□□□ -0.68
SHMT2-233ENST00000557529 GK2Q14410 553 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-233ENST00000557529 GLIPR1L1Q6UWM5 242 aa10.8□□□□□ -0.68
SHMT2-233ENST00000557529 UNQ6494/PRO21346Q6UXR6 183 aa10.8□□□□□ -0.68
SHMT2-233ENST00000557529 NRARPQ7Z6K4 114 aa10.8□□□□□ -0.68
SHMT2-233ENST00000557529 CXorf67Q86X51 503 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-233ENST00000557529 ZNF101Q8IZC7 436 aa10.8□□□□□ -0.68
SHMT2-233ENST00000557529 FTMTQ8N4E7 242 aa10.8□□□□□ -0.68
SHMT2-233ENST00000557529 TOMM5Q8N4H5 51 aa10.8□□□□□ -0.68
SHMT2-233ENST00000557529 CSNK2A3Q8NEV1 391 aa10.8□□□□□ -0.68
SHMT2-233ENST00000557529 KCNG3Q8TAE7 436 aa10.8□□□□□ -0.68
SHMT2-233ENST00000557529 PIGTQ969N2 578 aa10.8□□□□□ -0.68
SHMT2-233ENST00000557529 FAM46BQ96A09 425 aa10.8□□□□□ -0.68
SHMT2-233ENST00000557529 SNRNP40Q96DI7 357 aaKnown RBP10.8□□□□□ -0.68
SHMT2-233ENST00000557529 C7orf50Q9BRJ6 194 aaKnown RBP10.8□□□□□ -0.68
SHMT2-233ENST00000557529 OPN3Q9H1Y3 402 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-233ENST00000557529 KCNK15Q9H427 330 aa10.8□□□□□ -0.68
SHMT2-233ENST00000557529 CDH20Q9HBT6 801 aa10.8□□□□□ -0.68
SHMT2-233ENST00000557529 GPR173Q9NS66 373 aa10.8□□□□□ -0.68
SHMT2-233ENST00000557529 RBFOX1Q9NWB1 397 aaKnown RBP10.8□□□□□ -0.68
SHMT2-233ENST00000557529 EIF3KQ9UBQ5 218 aaKnown RBP10.8□□□□□ -0.68
SHMT2-233ENST00000557529 ZNF835Q9Y2P0 537 aa10.8□□□□□ -0.68
SHMT2-233ENST00000557529 AMDHD2Q9Y303 409 aa10.8□□□□□ -0.68
SHMT2-233ENST00000557529 TRAV18A0A075B6X5 111 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 CENPXA8MT69 81 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 TMEM14DPA8MWL7 114 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 C1QTNF9BB2RNN3 333 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 ICMTO60725 284 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 ECDO95905 644 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-233ENST00000557529 CD3GP09693 182 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 C1QTNF9P0C862 333 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 GSTT2BP0CG30 244 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 VSIG8P0DPA2 414 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 GLI4P10075 376 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 SPNP16150 400 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 OPRM1P35372 400 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 PTGFRP43088 359 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 OR3A4PP47883 348 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 QRFPP83859 136 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 KLRB1Q12918 225 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 C1QTNF12Q5T7M4 302 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 LHFPL2Q6ZUX7 228 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 BHLHA15Q7RTS1 189 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-233ENST00000557529 KRT74Q7RTS7 529 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 DOLPP1Q86YN1 238 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 WDR31Q8NA23 367 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 NAXEQ8NCW5 288 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 ENKURQ8TC29 256 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 ZCCHC14Q8WYQ9 949 aaKnown RBP10.79□□□□□ -0.68
SHMT2-233ENST00000557529 ITPKCQ96DU7 683 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 ZC3HAV1LQ96H79 300 aaKnown RBP10.79□□□□□ -0.68
SHMT2-233ENST00000557529 MS4A3Q96HJ5 214 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 SPACA5Q96QH8 159 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 S100A13Q99584 98 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 NUDT16L1Q9BRJ7 211 aaKnown RBP10.79□□□□□ -0.68
SHMT2-233ENST00000557529 CST11Q9H112 138 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 PIGMQ9H3S5 423 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 PTTG3PQ9NZH4 202 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 SLC7A11Q9UPY5 501 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 STARD10Q9Y365 291 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 GTF3C1Q12789 2109 aa10.79□□□□□ -0.68
SHMT2-233ENST00000557529 LANCL1O43813 399 aa10.78□□□□□ -0.68
SHMT2-233ENST00000557529 PFDN1O60925 122 aa10.78□□□□□ -0.68
SHMT2-233ENST00000557529 KDM4BO94953 1096 aa10.78□□□□□ -0.68
SHMT2-233ENST00000557529 NAT2P11245 290 aa10.78□□□□□ -0.68
SHMT2-233ENST00000557529 GDNFP39905 211 aa10.78□□□□□ -0.68
SHMT2-233ENST00000557529 WNT5AP41221 380 aa10.78□□□□□ -0.68
SHMT2-233ENST00000557529 IDH3GP51553 393 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-233ENST00000557529 FUT6P51993 359 aa10.78□□□□□ -0.68
SHMT2-233ENST00000557529 ATP1B3P54709 279 aa10.78□□□□□ -0.68
SHMT2-233ENST00000557529 MTCP1P56278 107 aa10.78□□□□□ -0.68
SHMT2-233ENST00000557529 SSBP1Q04837 148 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms