RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 TEX101Q9BY14 249 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 SLC52A3Q9NQ40 469 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 SLC6A12P48065 614 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 DUSP5Q16690 384 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 ANKRD55Q3KP44 614 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 TMEM268Q5VZI3 342 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 ADTRPQ96IZ2 230 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 SORBS1Q9BX66 1292 aaKnown RBP8.04□□□□□ -1.12
SYNE3-205ENST00000557275 CHST2Q9Y4C5 530 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 LANCL1O43813 399 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 CA3P07451 260 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 HRH1P35367 487 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 SCMH1Q96GD3 660 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 C3orf30Q96M34 536 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 C19orf43Q9BQ61 176 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 TXNDC17Q9BRA2 123 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 C1QTNF3Q9BXJ4 246 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 C1orf105O95561 183 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 CEACAM3P40198 252 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 CST9Q5W186 159 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 STPG2Q8N412 459 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 PLPP7Q8NBV4 271 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 NIPSNAP1Q9BPW8 284 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 TBXA2RP21731 343 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 EDDM3AQ14507 147 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 HSF5Q4G112 596 aaPredicted RBP8.04□□□□□ -1.12
SYNE3-205ENST00000557275 PWWP2BQ6NUJ5 590 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 LYRM4Q9HD34 91 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 TUBGCP6Q96RT7 1819 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 HMSDA8MTL9 139 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 M0QYG6 137 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 RD3LP0DJH9 198 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 CSF2RBP32927 897 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 KTI12Q96EK9 354 aaPredicted RBP8.04□□□□□ -1.12
SYNE3-205ENST00000557275 PSMG3Q9BT73 122 aaPredicted RBP8.04□□□□□ -1.12
SYNE3-205ENST00000557275 TCFL5Q9UL49 500 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 SLCO2B1O94956 709 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 CYB561P49447 251 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 PAFAH1B2P68402 229 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 SLC35E4Q6ICL7 350 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 C11orf87Q6NUJ2 197 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 SEZ6L2Q6UXD5 910 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 OR2I1PQ8NGU4 316 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 HES7Q9BYE0 225 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 P2RY12Q9H244 342 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 CA10Q9NS85 328 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 ALDOCP09972 364 aaKnown RBP8.04□□□□□ -1.12
SYNE3-205ENST00000557275 SLC36A1Q7Z2H8 476 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 MCHR2Q969V1 340 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 PIAS3Q9Y6X2 628 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 LOC102724200A0A096LPH7 203 aaPredicted RBP8.04□□□□□ -1.12
SYNE3-205ENST00000557275 MYADML2A6NDP7 307 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 SLC17A3O00476 420 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 CSNK1DP48730 415 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 TCL1AP56279 114 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 C9orf152Q5JTZ5 239 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 RPS27LQ71UM5 84 aaKnown RBP8.04□□□□□ -1.12
SYNE3-205ENST00000557275 USP3Q9Y6I4 520 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 ZNF385BQ569K4 471 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 DCXRQ7Z4W1 244 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 CDX2Q99626 313 aaPredicted RBP8.04□□□□□ -1.12
SYNE3-205ENST00000557275 DOCK3Q8IZD9 2030 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 MYOFQ9NZM1 2061 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 DDX60Q8IY21 1712 aaKnown RBP8.03□□□□□ -1.12
SYNE3-205ENST00000557275 GASTP01350 101 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 VWA2Q5GFL6 755 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 SPRYD7Q5W111 196 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 TMEM102Q8N9M5 508 aaPredicted RBP8.03□□□□□ -1.12
SYNE3-205ENST00000557275 ZNF383Q8NA42 475 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 UBTD2Q8WUN7 234 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 ST8SIA1Q92185 356 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 TMIGD2Q96BF3 282 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 WDR34Q96EX3 536 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 IFITM5A6NNB3 132 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 CRYBA1P05813 215 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 QDPRP09417 244 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 RPA2P15927 270 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 EMP1P54849 157 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 TMEM64Q6YI46 380 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 UBALD2Q8IYN6 164 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.03□□□□□ -1.12
SYNE3-205ENST00000557275 HSFX1Q9UBD0 423 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 SLC25A5P05141 298 aaKnown RBP8.03□□□□□ -1.12
SYNE3-205ENST00000557275 GLRA1P23415 457 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 CDX1P47902 265 aaPredicted RBP8.03□□□□□ -1.12
SYNE3-205ENST00000557275 LTC4SQ16873 150 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 ZDHHC23Q8IYP9 409 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 BANF2Q9H503 90 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 DUSP21Q9H596 190 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 RPL27P61353 136 aaKnown RBP8.03□□□□□ -1.12
SYNE3-205ENST00000557275 KHDC3LQ587J8 217 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 C19orf47Q8N9M1 422 aaKnown RBP8.03□□□□□ -1.12
SYNE3-205ENST00000557275 PTPRQQ9UMZ3 2332 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 DHRS7CA6NNS2 312 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 FPR2P25090 351 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 CD96P40200 585 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 PARM1Q6UWI2 310 aa8.03□□□□□ -1.12
SYNE3-205ENST00000557275 MYPOPQ86VE0 399 aaPredicted RBP8.03□□□□□ -1.12
SYNE3-205ENST00000557275 FAM71CQ8NEG0 241 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms