RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 RPUSD1Q9UJJ7 312 aaKnown RBP7.13□□□□□ -1.27
VRK1-206ENST00000557222 SAMD4AQ9UPU9 718 aaKnown RBP7.13□□□□□ -1.27
VRK1-206ENST00000557222 FAM96BQ9Y3D0 163 aa7.13□□□□□ -1.27
VRK1-206ENST00000557222 TRBV4-1A0A0J9YWV2 114 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 A0A0U1RQK1 487 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 BTBD17A6NE02 478 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 NME4O00746 187 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 BHLHE40O14503 412 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 HLA-DQA2P01906 255 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 GYPAP02724 150 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 COX4I1P13073 169 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 ZNF823P16415 610 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 ZNF92Q03936 586 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 SEC23BQ15437 767 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 MICBQ29980 383 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 ATPAF1Q5TC12 328 aaPredicted RBP7.12□□□□□ -1.27
VRK1-206ENST00000557222 DHRS7BQ6IAN0 325 aaPredicted RBP7.12□□□□□ -1.27
VRK1-206ENST00000557222 RPL13AP3Q6NVV1 102 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 Q6ZSV7 163 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 SLC36A1Q7Z2H8 476 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.12□□□□□ -1.27
VRK1-206ENST00000557222 FAM90A1Q86YD7 464 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 LINC00346Q8IVM7 164 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 CMTM4Q8IZR5 234 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 C19orf18Q8NEA5 215 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 OR4K13Q8NH42 304 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 C8orf46Q8TAG6 207 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 FANK1Q8TC84 345 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 SPSB4Q96A44 273 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 KCTD14Q9BQ13 255 aaPredicted RBP7.12□□□□□ -1.27
VRK1-206ENST00000557222 IFT27Q9BW83 186 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 DNTTIP1Q9H147 329 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 SP140LQ9H930 580 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 SMURF1Q9HCE7 757 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 RPRD1BQ9NQG5 326 aaKnown RBP7.12□□□□□ -1.27
VRK1-206ENST00000557222 DCAF13Q9NV06 445 aaKnown RBP7.12□□□□□ -1.27
VRK1-206ENST00000557222 MRPL22Q9NWU5 206 aaKnown RBP7.12□□□□□ -1.27
VRK1-206ENST00000557222 C1orf123Q9NWV4 160 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 ZNRD1Q9P1U0 126 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 ABCD2Q9UBJ2 740 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 FBLN5Q9UBX5 448 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 VPREB3Q9UKI3 123 aa7.12□□□□□ -1.27
VRK1-206ENST00000557222 PRPF19Q9UMS4 504 aaKnown RBP7.12□□□□□ -1.27
VRK1-206ENST00000557222 OR6C68A6NDL8 312 aa7.11□□□□□ -1.27
VRK1-206ENST00000557222 ANKRD30BLA7E2S9 258 aa7.11□□□□□ -1.27
VRK1-206ENST00000557222 RNASEK-C17orf49H0YIS7 233 aa7.11□□□□□ -1.27
VRK1-206ENST00000557222 XRCC2O43543 280 aa7.11□□□□□ -1.27
VRK1-206ENST00000557222 OR10H3O60404 316 aa7.11□□□□□ -1.27
VRK1-206ENST00000557222 CCDC22O60826 627 aa7.11□□□□□ -1.27
VRK1-206ENST00000557222 GMNNO75496 209 aa7.11□□□□□ -1.27
VRK1-206ENST00000557222 CFL1P23528 166 aaKnown RBP7.11□□□□□ -1.27
VRK1-206ENST00000557222 EEF1B2P24534 225 aaKnown RBP7.11□□□□□ -1.27
VRK1-206ENST00000557222 NAA10P41227 235 aaPredicted RBP7.11□□□□□ -1.27
VRK1-206ENST00000557222 GSSP48637 474 aa7.11□□□□□ -1.27
VRK1-206ENST00000557222 TGM4P49221 684 aa7.11□□□□□ -1.27
VRK1-206ENST00000557222 SNCBQ16143 134 aa7.11□□□□□ -1.27
VRK1-206ENST00000557222 PCK2Q16822 640 aa7.11□□□□□ -1.27
VRK1-206ENST00000557222 SNAI3Q3KNW1 292 aa7.11□□□□□ -1.27
VRK1-206ENST00000557222 TEX30Q5JUR7 227 aa7.11□□□□□ -1.27
VRK1-206ENST00000557222 KPRPQ5T749 579 aaPredicted RBP7.11□□□□□ -1.27
VRK1-206ENST00000557222 GLYATQ6IB77 296 aa7.11□□□□□ -1.27
VRK1-206ENST00000557222 CGB2Q6NT52 195 aa7.11□□□□□ -1.27
VRK1-206ENST00000557222 VMO1Q7Z5L0 202 aa7.11□□□□□ -1.27
VRK1-206ENST00000557222 BOLLQ8N9W6 283 aaKnown RBP7.11□□□□□ -1.27
VRK1-206ENST00000557222 CYB561A3Q8NBI2 242 aa7.11□□□□□ -1.27
VRK1-206ENST00000557222 OR2T4Q8NH00 348 aa7.11□□□□□ -1.27
VRK1-206ENST00000557222 DDOQ99489 341 aa7.11□□□□□ -1.27
VRK1-206ENST00000557222 KCNJ15Q99712 375 aa7.11□□□□□ -1.27
VRK1-206ENST00000557222 GORASP2Q9H8Y8 452 aa7.11□□□□□ -1.27
VRK1-206ENST00000557222 FGFR1OP2Q9NVK5 253 aa7.11□□□□□ -1.27
VRK1-206ENST00000557222 ZNF816-ZNF321PA0A0X1KG74 233 aa7.1□□□□□ -1.27
VRK1-206ENST00000557222 hCG_1807616A0A1W2PRN6 198 aa7.1□□□□□ -1.27
VRK1-206ENST00000557222 ANKRD34BA5PLL1 514 aa7.1□□□□□ -1.27
VRK1-206ENST00000557222 A6NLC8 198 aa7.1□□□□□ -1.27
VRK1-206ENST00000557222 NDUFB3O43676 98 aa7.1□□□□□ -1.27
VRK1-206ENST00000557222 FCN3O75636 299 aa7.1□□□□□ -1.27
VRK1-206ENST00000557222 GADD45GO95257 159 aa7.1□□□□□ -1.27
VRK1-206ENST00000557222 APOC1P02654 83 aa7.1□□□□□ -1.27
VRK1-206ENST00000557222 GRPP07492 148 aa7.1□□□□□ -1.27
VRK1-206ENST00000557222 CSF1P09603 554 aa7.1□□□□□ -1.27
VRK1-206ENST00000557222 SLC15A1P46059 708 aa7.1□□□□□ -1.27
VRK1-206ENST00000557222 UBE2E1P51965 193 aa7.1□□□□□ -1.27
VRK1-206ENST00000557222 BLVRAP53004 296 aa7.1□□□□□ -1.27
VRK1-206ENST00000557222 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.1□□□□□ -1.27
VRK1-206ENST00000557222 ACSM1Q08AH1 577 aa7.1□□□□□ -1.27
VRK1-206ENST00000557222 TSPAN31Q12999 210 aa7.1□□□□□ -1.27
VRK1-206ENST00000557222 AANATQ16613 207 aa7.1□□□□□ -1.27
VRK1-206ENST00000557222 LRRC10Q5BKY1 277 aa7.1□□□□□ -1.27
VRK1-206ENST00000557222 GLYATL3Q5SZD4 288 aa7.1□□□□□ -1.27
VRK1-206ENST00000557222 NCR3LG1Q68D85 454 aa7.1□□□□□ -1.27
VRK1-206ENST00000557222 ZDHHC21Q8IVQ6 265 aa7.1□□□□□ -1.27
VRK1-206ENST00000557222 C11orf53Q8IXP5 236 aa7.1□□□□□ -1.27
VRK1-206ENST00000557222 LINC00471Q8N535 108 aa7.1□□□□□ -1.27
VRK1-206ENST00000557222 OR1M1Q8NGA1 313 aa7.1□□□□□ -1.27
VRK1-206ENST00000557222 OR56B2PQ8NGI1 322 aa7.1□□□□□ -1.27
VRK1-206ENST00000557222 OR10Z1Q8NGY1 313 aa7.1□□□□□ -1.27
VRK1-206ENST00000557222 OR8S1Q8NH09 359 aa7.1□□□□□ -1.27
VRK1-206ENST00000557222 OR52J3Q8NH60 311 aa7.1□□□□□ -1.27
VRK1-206ENST00000557222 OR2AE1Q8NHA4 323 aa7.1□□□□□ -1.27
VRK1-206ENST00000557222 GNPDA2Q8TDQ7 276 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms