RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 GTF2E2P29084 291 aaKnown RBP4□□□□□ -1.77
HIF1A-209ENST00000556827 CHI3L1P36222 383 aaPredicted RBP4□□□□□ -1.77
HIF1A-209ENST00000556827 MAGEB1P43366 347 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 IDH2P48735 452 aaKnown RBP4□□□□□ -1.77
HIF1A-209ENST00000556827 PPOXP50336 477 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 IDH3GP51553 393 aaPredicted RBP4□□□□□ -1.77
HIF1A-209ENST00000556827 POLR2HP52434 150 aaKnown RBP4□□□□□ -1.77
HIF1A-209ENST00000556827 NDUFV3P56181 108 aaKnown RBP4□□□□□ -1.77
HIF1A-209ENST00000556827 COPZ1P61923 177 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 ZNF141Q15928 474 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 MS4A18Q3C1V0 323 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 ARHGAP11BQ3KRB8 267 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 GPAT3Q53EU6 434 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 TCTEX1D4Q5JR98 221 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 ANXA8L1Q5VT79 327 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 IL23RQ5VWK5 629 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 REP15Q6BDI9 236 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 RNF165Q6ZSG1 346 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 C6orf120Q7Z4R8 191 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 KRT77Q7Z794 578 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 CCDC36Q8IYA8 594 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 TRIML2Q8N7C3 387 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 WDR31Q8NA23 367 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 OR52E4Q8NGH9 312 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 OR5D16Q8NGK9 328 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 OR4A15Q8NGL6 344 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 OR5AK3PQ8NH89 298 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 PSMA8Q8TAA3 256 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 TWIST2Q8WVJ9 160 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 UBLCP1Q8WVY7 318 aaPredicted RBP4□□□□□ -1.77
HIF1A-209ENST00000556827 CKAP2Q8WWK9 683 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 TUBGCP3Q96CW5 907 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 SLC35G5Q96KT7 338 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 ZNF317Q96PQ6 595 aaPredicted RBP4□□□□□ -1.77
HIF1A-209ENST00000556827 SLC38A2Q96QD8 506 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 PLA2G12AQ9BZM1 189 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 BPESC1Q9GZL8 116 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 CTPS2Q9NRF8 586 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 PYCARDQ9ULZ3 195 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 SH3GLB1Q9Y371 365 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 WDR45Q9Y484 360 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 DNAJC15Q9Y5T4 150 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 KCNE3Q9Y6H6 103 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 AKAP6Q13023 2319 aa4□□□□□ -1.77
HIF1A-209ENST00000556827 TMED7-TICAM2A0A0A6YYA0 188 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 RNF103-CHMP3A0A140T963 221 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 SH3PXD2BA1X283 911 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 LRP5LA4QPB2 252 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 CFAP73A6NFT4 308 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 SMIM23A6NLE4 172 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 hCG_2039718K7EN88 272 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 FCMRO60667 390 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 MTRF1O75570 445 aaKnown RBP3.99□□□□□ -1.77
HIF1A-209ENST00000556827 UGT2B17O75795 530 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 VAMP5O95183 116 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 STAMBPO95630 424 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 IGHV3-13P01766 116 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 GUSBP08236 651 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 FGF4P08620 206 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 NCF2P19878 526 aaPredicted RBP3.99□□□□□ -1.77
HIF1A-209ENST00000556827 UQCRC2P22695 453 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 SERPINB5P36952 375 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 IER3P46695 156 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 KHKP50053 298 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 ATP4BP51164 291 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 SH3BGRP55822 239 aaPredicted RBP3.99□□□□□ -1.77
HIF1A-209ENST00000556827 ERVK-16P61578 105 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 HBA1P69905 142 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 IL1RL1Q01638 556 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 SLC17A1Q14916 467 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 MEP1BQ16820 701 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 HIKESHIQ53FT3 197 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 ZNF311Q5JNZ3 666 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 TSPO2Q5TGU0 170 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 FAM219BQ5XKK7 198 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 B3GLCTQ6Y288 498 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 SNX32Q86XE0 403 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 C10orf107Q8IVU9 208 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 ZNF786Q8N393 782 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 AGR3Q8TD06 166 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 MGARPQ8TDB4 240 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 TMEM45BQ96B21 275 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 DNAJA3Q96EY1 480 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 AURKBQ96GD4 344 aaPredicted RBP3.99□□□□□ -1.77
HIF1A-209ENST00000556827 FCRL1Q96LA6 429 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 TRNT1Q96Q11 434 aaKnown RBP3.99□□□□□ -1.77
HIF1A-209ENST00000556827 KLHDC3Q9BQ90 382 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 CHCHD5Q9BSY4 110 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 C1orf50Q9BV19 199 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 OR11A1Q9GZK7 315 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 ZNF350Q9GZX5 532 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 METTL17Q9H7H0 456 aaPredicted RBP3.99□□□□□ -1.77
HIF1A-209ENST00000556827 GNB4Q9HAV0 340 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 EXOSC3Q9NQT5 275 aaKnown RBP3.99□□□□□ -1.77
HIF1A-209ENST00000556827 FLVCR1Q9Y5Y0 555 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 NINQ8N4C6 2090 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 CSPG4Q6UVK1 2322 aa3.99□□□□□ -1.77
HIF1A-209ENST00000556827 IGLV4-3A0A075B6K6 122 aa3.98□□□□□ -1.77
HIF1A-209ENST00000556827 A0A096LPI6 279 aa3.98□□□□□ -1.77
HIF1A-209ENST00000556827 IGHV1-18A0A0C4DH31 117 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms