RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 IL5RAQ01344 420 aa9.66□□□□□ -0.86
SLIRP-206ENST00000556375 MFGE8Q08431 387 aaPredicted RBP9.66□□□□□ -0.86
SLIRP-206ENST00000556375 ZSCAN26Q16670 478 aa9.66□□□□□ -0.86
SLIRP-206ENST00000556375 ZIK1Q3SY52 487 aaPredicted RBP9.66□□□□□ -0.86
SLIRP-206ENST00000556375 ESCO2Q56NI9 601 aa9.66□□□□□ -0.86
SLIRP-206ENST00000556375 SLC25A30Q5SVS4 291 aa9.66□□□□□ -0.86
SLIRP-206ENST00000556375 FAM201AQ5SY85 155 aa9.66□□□□□ -0.86
SLIRP-206ENST00000556375 DCAF12L2Q5VW00 463 aa9.66□□□□□ -0.86
SLIRP-206ENST00000556375 WDR86Q86TI4 376 aa9.66□□□□□ -0.86
SLIRP-206ENST00000556375 TEX29Q8N6K0 151 aa9.66□□□□□ -0.86
SLIRP-206ENST00000556375 OR2T27Q8NH04 317 aa9.66□□□□□ -0.86
SLIRP-206ENST00000556375 ITPKCQ96DU7 683 aa9.66□□□□□ -0.86
SLIRP-206ENST00000556375 MBOAT4Q96T53 435 aa9.66□□□□□ -0.86
SLIRP-206ENST00000556375 TMEM246Q9BRR3 403 aa9.66□□□□□ -0.86
SLIRP-206ENST00000556375 PBOV1Q9GZY1 135 aa9.66□□□□□ -0.86
SLIRP-206ENST00000556375 C1orf123Q9NWV4 160 aa9.66□□□□□ -0.86
SLIRP-206ENST00000556375 MRM2Q9UI43 246 aaKnown RBP9.66□□□□□ -0.86
SLIRP-206ENST00000556375 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.66□□□□□ -0.86
SLIRP-206ENST00000556375 POLR3KQ9Y2Y1 108 aaPredicted RBP9.66□□□□□ -0.86
SLIRP-206ENST00000556375 RHBDD3Q9Y3P4 386 aa9.66□□□□□ -0.86
SLIRP-206ENST00000556375 R4GMQ9 66 aa9.66□□□□□ -0.86
SLIRP-206ENST00000556375 ZNF816-ZNF321PA0A0X1KG74 233 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 hCG_1807616A0A1W2PRN6 198 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 LOC110117498-PIK3R3F6TDL0 507 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 APOL3O95236 402 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 KRT8P05787 483 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 GRPP07492 148 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 WNT2P09544 360 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 ZFP36P26651 326 aaKnown RBP9.65□□□□□ -0.86
SLIRP-206ENST00000556375 MAP2K3P46734 347 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 SEC61A1P61619 476 aaKnown RBP9.65□□□□□ -0.86
SLIRP-206ENST00000556375 ZNF154Q13106 437 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 PRDX4Q13162 271 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 KCNJ8Q15842 424 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 BCL2L15Q5TBC7 163 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 MEDAGQ5VYS4 303 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 FAHD2BQ6P2I3 314 aaPredicted RBP9.65□□□□□ -0.86
SLIRP-206ENST00000556375 DCDC5Q6ZRR9 648 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 ZBTB49Q6ZSB9 765 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 NLRC3Q7RTR2 1065 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 KRT74Q7RTS7 529 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 SSX6Q7RTT6 188 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 COMMD2Q86X83 199 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 GALNT4Q8N4A0 578 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 OR10H4Q8NGA5 316 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 NEIL1Q96FI4 390 aaPredicted RBP9.65□□□□□ -0.86
SLIRP-206ENST00000556375 FAHD2AQ96GK7 314 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 TBX5Q99593 518 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 SLC29A1Q99808 456 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 APOL4Q9BPW4 351 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 MICU1Q9BPX6 476 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 RTL8AQ9BWD3 113 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 TMPRSS13Q9BYE2 586 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 TLNRD1Q9H1K6 362 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 TRIM36Q9NQ86 728 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 GPR84Q9NQS5 396 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 MIOXQ9UGB7 285 aa9.65□□□□□ -0.86
SLIRP-206ENST00000556375 DNHD1Q96M86 4753 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 A0A1W2PQL4 384 aaPredicted RBP9.64□□□□□ -0.87
SLIRP-206ENST00000556375 TMEM210A6NLX4 147 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 ZNF850A8MQ14 1090 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 LGALS8O00214 317 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 MAGEB4O15481 346 aaPredicted RBP9.64□□□□□ -0.87
SLIRP-206ENST00000556375 ENTPD6O75354 484 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 BAG2O95816 211 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 TTRP02766 147 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 CD80P33681 288 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 ATP6V1E1P36543 226 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 MTNR1AP48039 350 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 ACTC1P68032 377 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 ACTA1P68133 377 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 SCGB2A2Q13296 93 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 OCLNQ16625 522 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 ZNF684Q5T5D7 378 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 ZBTB37Q5TC79 503 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 PLEKHG7Q6ZR37 379 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 ZNF826PQ6ZT77 177 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 ZDHHC23Q8IYP9 409 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 GCSAMQ8N6F7 178 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 SEMA6DQ8NFY4 1073 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 OR1M1Q8NGA1 313 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 OR8B3Q8NGG8 313 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 OR51E1Q8TCB6 317 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 HPSE2Q8WWQ2 592 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 OR5P3Q8WZ94 311 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 UBE2FQ969M7 185 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 FAM71F1Q96KD3 344 aaPredicted RBP9.64□□□□□ -0.87
SLIRP-206ENST00000556375 RDH12Q96NR8 316 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 OR8B2Q96RD0 313 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 SSBP3Q9BWW4 388 aaPredicted RBP9.64□□□□□ -0.87
SLIRP-206ENST00000556375 PPP1R3EQ9H7J1 279 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 RNPEPL1Q9HAU8 725 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 OR5V1Q9UGF6 321 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 OR52A1Q9UKL2 312 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 GTF2A1LQ9UNN4 478 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 GMPPBQ9Y5P6 360 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 SNX5Q9Y5X3 404 aa9.64□□□□□ -0.87
SLIRP-206ENST00000556375 LOC105371242A0A075B767 164 aa9.63□□□□□ -0.87
SLIRP-206ENST00000556375 TRAV38-1A0A0B4J264 116 aa9.63□□□□□ -0.87
SLIRP-206ENST00000556375 OOEPA6NGQ2 149 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms