RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 NUAK2Q9H093 628 aa7.36□□□□□ -1.23
GTF2A1-204ENST00000556268 ACOXLQ9NUZ1 547 aa7.36□□□□□ -1.23
GTF2A1-204ENST00000556268 PTTG3PQ9NZH4 202 aa7.36□□□□□ -1.23
GTF2A1-204ENST00000556268 LHFPL6Q9Y693 200 aa7.36□□□□□ -1.23
GTF2A1-204ENST00000556268 IGHV3-64DA0A0J9YX35 117 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 C5orf63A6NC05 138 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 J3KTA2 159 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 LGALS8O00214 317 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 DCTN6O00399 190 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 XKRYO14609 159 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 FCN3O75636 299 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 TSPAN9O75954 239 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 PPP1R3DO95685 299 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 LHBP01229 141 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 IGHV4-59P01825 116 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 IRF2P14316 349 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 RPL4P36578 427 aaKnown RBP7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 CDKN2AP42771 156 aaKnown RBP7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 YAP1P46937 504 aaKnown RBP7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 COX10Q12887 443 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 GK2Q14410 553 aaPredicted RBP7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 MPPED2Q15777 294 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 RUSC1-AS1Q66K80 236 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 PTCHD4Q6ZW05 846 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 VTCN1Q7Z7D3 282 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 NAA40Q86UY6 237 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 LY6G5BQ8NDX9 201 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 TPD52L3Q96J77 140 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 LRGUKQ96M69 825 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 SIKE1Q9BRV8 207 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 PCGF1Q9BSM1 259 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 FNDC11Q9BVV2 318 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 TRIM15Q9C019 465 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 HDHD2Q9H0R4 259 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 SIRPDQ9H106 197 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 SYT4Q9H2B2 425 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 ANKRD19PQ9H560 264 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 TNFRSF19Q9NS68 423 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 ERVK-18Q9QC07 812 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 RHCGQ9UBD6 479 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 RNF7Q9UBF6 113 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 CTSZQ9UBR2 303 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 TMCC3Q9ULS5 477 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 B9D1Q9UPM9 204 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 SIGLEC7Q9Y286 467 aa7.35□□□□□ -1.23
GTF2A1-204ENST00000556268 IGLV1-36A0A0B4J1U3 117 aa7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 ELOVL7A1L3X0 281 aa7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 FAM220BPB1ANY3 271 aa7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 EDF1O60869 148 aaKnown RBP7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 ECDO95905 644 aaPredicted RBP7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 ACSM4P0C7M7 580 aa7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 MDH1P40925 334 aaKnown RBP7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 GPR4P46093 362 aa7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 FXYD6P3P58550 94 aa7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 HOXA4Q00056 320 aaPredicted RBP7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 ECH1Q13011 328 aa7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 KCNJ8Q15842 424 aa7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 KPRPQ5T749 579 aaPredicted RBP7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 ZNF730Q6ZMV8 503 aa7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 DPY19L2P2Q6ZN68 376 aa7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 Q6ZSV7 163 aa7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 ADCK1Q86TW2 530 aa7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 OR6V1Q8N148 313 aa7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 PNLDC1Q8NA58 520 aaKnown RBP7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 C19orf18Q8NEA5 215 aa7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 OR11L1Q8NGX0 322 aa7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 SLC7A13Q8TCU3 470 aa7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 NPRL2Q8WTW4 380 aa7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 LZICQ8WZA0 190 aa7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 ATP6V1G3Q96LB4 118 aa7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 ZNF570Q96NI8 536 aa7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 HCAR1Q9BXC0 346 aa7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 SLC22A4Q9H015 551 aa7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 WDR76Q9H967 626 aa7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 PNRC2Q9NPJ4 139 aaKnown RBP7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 KAAG1Q9UBP8 84 aa7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 IER3IP1Q9Y5U9 82 aa7.34□□□□□ -1.23
GTF2A1-204ENST00000556268 TRAV38-1A0A0B4J264 116 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 A0A0U1RQK1 487 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 A0A1W2PRQ8 180 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 ARPC3O15145 178 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 GMDSO60547 372 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 NDUFB2O95178 105 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 IFNW1P05000 195 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 GRPP07492 148 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 CRABP1P29762 137 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 GGT2P36268 569 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 OMPP47874 163 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 LOXL3P58215 753 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 ARF6P62330 175 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 KRR1Q13601 381 aaKnown RBP7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 DGCR6Q14129 220 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 MEP1BQ16820 701 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 HIST2H2BDQ6DRA6 164 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 SFRP4Q6FHJ7 346 aaPredicted RBP7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 SLC18B1Q6NT16 456 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 CORO6Q6QEF8 472 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 METAP1DQ6UB28 335 aaPredicted RBP7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 GDPGP1Q6ZNW5 385 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 ZNF788Q6ZQV5 615 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms