RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 C1QL2Q7Z5L3 287 aa17.13■□□□□ 0.33
VTI1B-205ENST00000555543 C11orf53Q8IXP5 236 aa17.13■□□□□ 0.33
VTI1B-205ENST00000555543 GCSAMQ8N6F7 178 aa17.13■□□□□ 0.33
VTI1B-205ENST00000555543 OR8J1Q8NGP2 316 aa17.13■□□□□ 0.33
VTI1B-205ENST00000555543 PPP1R14AQ96A00 147 aa17.13■□□□□ 0.33
VTI1B-205ENST00000555543 ITPKCQ96DU7 683 aa17.13■□□□□ 0.33
VTI1B-205ENST00000555543 FGF23Q9GZV9 251 aaPredicted RBP17.13■□□□□ 0.33
VTI1B-205ENST00000555543 PBOV1Q9GZY1 135 aa17.13■□□□□ 0.33
VTI1B-205ENST00000555543 C7orf69Q9H7B7 122 aa17.13■□□□□ 0.33
VTI1B-205ENST00000555543 CLN6Q9NWW5 311 aa17.13■□□□□ 0.33
VTI1B-205ENST00000555543 MIOXQ9UGB7 285 aa17.13■□□□□ 0.33
VTI1B-205ENST00000555543 A0A0U1RQV5 110 aa17.12■□□□□ 0.33
VTI1B-205ENST00000555543 E9PQ18 207 aa17.12■□□□□ 0.33
VTI1B-205ENST00000555543 C3orf80F5H4A9 247 aa17.12■□□□□ 0.33
VTI1B-205ENST00000555543 ZNF12P17014 697 aa17.12■□□□□ 0.33
VTI1B-205ENST00000555543 EGR1P18146 543 aa17.12■□□□□ 0.33
VTI1B-205ENST00000555543 HTR1FP30939 366 aa17.12■□□□□ 0.33
VTI1B-205ENST00000555543 DCTDP32321 178 aa17.12■□□□□ 0.33
VTI1B-205ENST00000555543 GNALP38405 381 aa17.12■□□□□ 0.33
VTI1B-205ENST00000555543 RIDAP52758 137 aaKnown RBP17.12■□□□□ 0.33
VTI1B-205ENST00000555543 MZT1Q08AG7 82 aa17.12■□□□□ 0.33
VTI1B-205ENST00000555543 ZNF154Q13106 437 aa17.12■□□□□ 0.33
VTI1B-205ENST00000555543 PRDX4Q13162 271 aa17.12■□□□□ 0.33
VTI1B-205ENST00000555543 PHC2Q8IXK0 858 aa17.12■□□□□ 0.33
VTI1B-205ENST00000555543 CBR4Q8N4T8 237 aa17.12■□□□□ 0.33
VTI1B-205ENST00000555543 OR1M1Q8NGA1 313 aa17.12■□□□□ 0.33
VTI1B-205ENST00000555543 FAM81AQ8TBF8 368 aa17.12■□□□□ 0.33
VTI1B-205ENST00000555543 UBE2FQ969M7 185 aa17.12■□□□□ 0.33
VTI1B-205ENST00000555543 EME1Q96AY2 570 aa17.12■□□□□ 0.33
VTI1B-205ENST00000555543 NEIL1Q96FI4 390 aaPredicted RBP17.12■□□□□ 0.33
VTI1B-205ENST00000555543 TBX5Q99593 518 aa17.12■□□□□ 0.33
VTI1B-205ENST00000555543 SSBP3Q9BWW4 388 aaPredicted RBP17.12■□□□□ 0.33
VTI1B-205ENST00000555543 S100A14Q9HCY8 104 aa17.12■□□□□ 0.33
VTI1B-205ENST00000555543 WARS2Q9UGM6 360 aaKnown RBP17.12■□□□□ 0.33
VTI1B-205ENST00000555543 MRM2Q9UI43 246 aaKnown RBP17.12■□□□□ 0.33
VTI1B-205ENST00000555543 METRNQ9UJH8 293 aa17.12■□□□□ 0.33
VTI1B-205ENST00000555543 ZNF391Q9UJN7 358 aa17.12■□□□□ 0.33
VTI1B-205ENST00000555543 hCG_1807616A0A1W2PRN6 198 aa17.11■□□□□ 0.33
VTI1B-205ENST00000555543 ACOD1A6NK06 481 aa17.11■□□□□ 0.33
VTI1B-205ENST00000555543 ZNF850A8MQ14 1090 aa17.11■□□□□ 0.33
VTI1B-205ENST00000555543 ZNF670-ZNF695F2Z2N8 137 aa17.11■□□□□ 0.33
VTI1B-205ENST00000555543 LGALS8O00214 317 aa17.11■□□□□ 0.33
VTI1B-205ENST00000555543 CST4P01036 141 aa17.11■□□□□ 0.33
VTI1B-205ENST00000555543 FSHBP01225 129 aa17.11■□□□□ 0.33
VTI1B-205ENST00000555543 IGLV3-1P01715 115 aa17.11■□□□□ 0.33
VTI1B-205ENST00000555543 PITPNBP48739 271 aa17.11■□□□□ 0.33
VTI1B-205ENST00000555543 ALDH3A2P51648 485 aa17.11■□□□□ 0.33
VTI1B-205ENST00000555543 CDC42P60953 191 aa17.11■□□□□ 0.33
VTI1B-205ENST00000555543 PAX2Q02962 417 aa17.11■□□□□ 0.33
VTI1B-205ENST00000555543 ZNF829Q3KNS6 432 aaPredicted RBP17.11■□□□□ 0.33
VTI1B-205ENST00000555543 ZIK1Q3SY52 487 aaPredicted RBP17.11■□□□□ 0.33
VTI1B-205ENST00000555543 DCDC5Q6ZRR9 648 aa17.11■□□□□ 0.33
VTI1B-205ENST00000555543 OR8B3Q8NGG8 313 aa17.11■□□□□ 0.33
VTI1B-205ENST00000555543 OR51E1Q8TCB6 317 aa17.11■□□□□ 0.33
VTI1B-205ENST00000555543 HPSE2Q8WWQ2 592 aa17.11■□□□□ 0.33
VTI1B-205ENST00000555543 OR8B2Q96RD0 313 aa17.11■□□□□ 0.33
VTI1B-205ENST00000555543 MNTQ99583 582 aa17.11■□□□□ 0.33
VTI1B-205ENST00000555543 CTSZQ9UBR2 303 aa17.11■□□□□ 0.33
VTI1B-205ENST00000555543 NUFIP1Q9UHK0 495 aaKnown RBP17.11■□□□□ 0.33
VTI1B-205ENST00000555543 INSIG2Q9Y5U4 225 aa17.11■□□□□ 0.33
VTI1B-205ENST00000555543 PHYHO14832 338 aa17.1■□□□□ 0.33
VTI1B-205ENST00000555543 LHBP01229 141 aa17.1■□□□□ 0.33
VTI1B-205ENST00000555543 PSMB10P40306 273 aa17.1■□□□□ 0.33
VTI1B-205ENST00000555543 GNB2P62879 340 aa17.1■□□□□ 0.33
VTI1B-205ENST00000555543 ZNF841Q6ZN19 808 aa17.1■□□□□ 0.33
VTI1B-205ENST00000555543 GALNT4Q8N4A0 578 aa17.1■□□□□ 0.33
VTI1B-205ENST00000555543 FTMTQ8N4E7 242 aa17.1■□□□□ 0.33
VTI1B-205ENST00000555543 TMEM158Q8WZ71 300 aa17.1■□□□□ 0.33
VTI1B-205ENST00000555543 OR5P3Q8WZ94 311 aa17.1■□□□□ 0.33
VTI1B-205ENST00000555543 DACT3Q96B18 629 aaPredicted RBP17.1■□□□□ 0.33
VTI1B-205ENST00000555543 HRASLS5Q96KN8 279 aa17.1■□□□□ 0.33
VTI1B-205ENST00000555543 RAB3IPQ96QF0 476 aaPredicted RBP17.1■□□□□ 0.33
VTI1B-205ENST00000555543 MBOAT4Q96T53 435 aa17.1■□□□□ 0.33
VTI1B-205ENST00000555543 TLNRD1Q9H1K6 362 aa17.1■□□□□ 0.33
VTI1B-205ENST00000555543 GPR84Q9NQS5 396 aa17.1■□□□□ 0.33
VTI1B-205ENST00000555543 OR5V1Q9UGF6 321 aa17.1■□□□□ 0.33
VTI1B-205ENST00000555543 ORC6Q9Y5N6 252 aa17.1■□□□□ 0.33
VTI1B-205ENST00000555543 MPC1Q9Y5U8 109 aa17.1■□□□□ 0.33
VTI1B-205ENST00000555543 A0A1W2PQL4 384 aaPredicted RBP17.09■□□□□ 0.33
VTI1B-205ENST00000555543 OOEPA6NGQ2 149 aa17.09■□□□□ 0.33
VTI1B-205ENST00000555543 ANXA2P2A6NMY6 339 aa17.09■□□□□ 0.33
VTI1B-205ENST00000555543 TNFRSF13BO14836 293 aaPredicted RBP17.09■□□□□ 0.33
VTI1B-205ENST00000555543 TTRP02766 147 aa17.09■□□□□ 0.33
VTI1B-205ENST00000555543 EPHA1P21709 976 aa17.09■□□□□ 0.33
VTI1B-205ENST00000555543 CPT2P23786 658 aa17.09■□□□□ 0.33
VTI1B-205ENST00000555543 IL5RAQ01344 420 aa17.09■□□□□ 0.33
VTI1B-205ENST00000555543 SNCBQ16143 134 aa17.09■□□□□ 0.33
VTI1B-205ENST00000555543 WDR82Q6UXN9 313 aa17.09■□□□□ 0.33
VTI1B-205ENST00000555543 NLRC3Q7RTR2 1065 aa17.09■□□□□ 0.33
VTI1B-205ENST00000555543 COMMD2Q86X83 199 aa17.09■□□□□ 0.33
VTI1B-205ENST00000555543 FAM90A1Q86YD7 464 aa17.09■□□□□ 0.33
VTI1B-205ENST00000555543 PQLC1Q8N2U9 271 aa17.09■□□□□ 0.33
VTI1B-205ENST00000555543 LRRC29Q8WV35 223 aa17.09■□□□□ 0.33
VTI1B-205ENST00000555543 PIGCQ92535 297 aa17.09■□□□□ 0.33
VTI1B-205ENST00000555543 FAM71F1Q96KD3 344 aaPredicted RBP17.09■□□□□ 0.33
VTI1B-205ENST00000555543 SLC29A1Q99808 456 aa17.09■□□□□ 0.33
VTI1B-205ENST00000555543 MICU1Q9BPX6 476 aa17.09■□□□□ 0.33
VTI1B-205ENST00000555543 RTL8AQ9BWD3 113 aa17.09■□□□□ 0.33
VTI1B-205ENST00000555543 IMPAD1Q9NX62 359 aa17.09■□□□□ 0.33
VTI1B-205ENST00000555543 GTF2A1LQ9UNN4 478 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms