RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 FRMD8P1Q9BZ68 369 aaPredicted RBP3.31□□□□□ -1.88
VRK1-205ENST00000555402 NDEL1Q9GZM8 345 aa3.31□□□□□ -1.88
VRK1-205ENST00000555402 OR52D1Q9H346 318 aa3.31□□□□□ -1.88
VRK1-205ENST00000555402 ZNF430Q9H8G1 570 aaPredicted RBP3.31□□□□□ -1.88
VRK1-205ENST00000555402 SLC38A10Q9HBR0 1119 aa3.31□□□□□ -1.88
VRK1-205ENST00000555402 YTHDF2Q9Y5A9 579 aaKnown RBP3.31□□□□□ -1.88
VRK1-205ENST00000555402 TSSC4Q9Y5U2 329 aaPredicted RBP3.31□□□□□ -1.88
VRK1-205ENST00000555402 IGHV1OR15-9A0A0B4J2B8 117 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 A0A0U1RQV1 116 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 GSTTP1A0A1W2PQM5 241 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 A0A1W2PRF3 423 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 A0A1W2PRM7 423 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 TRPC5OSA6NMA1 111 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 RSPH10B2B2RC85 870 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 RBFOX2O43251 390 aaKnown RBP eCLIP3.3□□□□□ -1.88
VRK1-205ENST00000555402 CHST10O43529 356 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 CDK14O94921 469 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 IGKV3-11P04433 115 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 TACSTD2P09758 323 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 RSPH10BP0C881 870 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 IGFBP3P17936 291 aaPredicted RBP3.3□□□□□ -1.88
VRK1-205ENST00000555402 MYCNOSP40205 109 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 PAFAH1B2P68402 229 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 SIGLEC14Q08ET2 396 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 EBI3Q14213 229 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 OR2T5Q6IEZ7 315 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 Q6ZR03 302 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 OR2W3Q7Z3T1 314 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 LRRC8AQ8IWT6 810 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 ARHGAP18Q8N392 663 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 OR2T29Q8NH02 315 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 ACBD6Q9BR61 282 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 TMEM243Q9BU79 118 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 FGF23Q9GZV9 251 aaPredicted RBP3.3□□□□□ -1.88
VRK1-205ENST00000555402 OR52A5Q9H2C5 316 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 ARMC7Q9H6L4 198 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 REEP1Q9H902 201 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 HES2Q9Y543 173 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 ATP6V1DQ9Y5K8 247 aa3.3□□□□□ -1.88
VRK1-205ENST00000555402 IGSF9BQ9UPX0 1349 aa3.29□□□□□ -1.88
VRK1-205ENST00000555402 GOLGA8QA0A0J9YX86 632 aa3.29□□□□□ -1.88
VRK1-205ENST00000555402 GOLGA8JA6NMD2 632 aa3.29□□□□□ -1.88
VRK1-205ENST00000555402 RAD1O60671 282 aa3.29□□□□□ -1.88
VRK1-205ENST00000555402 NDUFS6O75380 124 aaKnown RBP3.29□□□□□ -1.88
VRK1-205ENST00000555402 CBR3O75828 277 aa3.29□□□□□ -1.88
VRK1-205ENST00000555402 SMC2O95347 1197 aa3.29□□□□□ -1.88
VRK1-205ENST00000555402 ETHE1O95571 254 aa3.29□□□□□ -1.88
VRK1-205ENST00000555402 PRB2P02812 416 aaPredicted RBP3.29□□□□□ -1.88
VRK1-205ENST00000555402 KLK1P06870 262 aa3.29□□□□□ -1.88
VRK1-205ENST00000555402 MRPL3P09001 348 aaKnown RBP3.29□□□□□ -1.88
VRK1-205ENST00000555402 ZNF688P0C7X2 276 aa3.29□□□□□ -1.88
VRK1-205ENST00000555402 ZNF806P0C7X5 589 aa3.29□□□□□ -1.88
VRK1-205ENST00000555402 GOLGA8HP0CJ92 632 aa3.29□□□□□ -1.88
VRK1-205ENST00000555402 ZNF32P17041 273 aa3.29□□□□□ -1.88
VRK1-205ENST00000555402 KIR3DL2P43630 455 aa3.29□□□□□ -1.88
VRK1-205ENST00000555402 CRADDP78560 199 aa3.29□□□□□ -1.88
VRK1-205ENST00000555402 ZNF684Q5T5D7 378 aa3.29□□□□□ -1.88
VRK1-205ENST00000555402 RTL4Q6ZR62 310 aa3.29□□□□□ -1.88
VRK1-205ENST00000555402 LINC00336Q6ZUF6 198 aa3.29□□□□□ -1.88
VRK1-205ENST00000555402 SLC35D2Q76EJ3 337 aa3.29□□□□□ -1.88
VRK1-205ENST00000555402 TRMT10CQ7L0Y3 403 aaKnown RBP3.29□□□□□ -1.88
VRK1-205ENST00000555402 WDR86Q86TI4 376 aa3.29□□□□□ -1.88
VRK1-205ENST00000555402 WDR31Q8NA23 367 aa3.29□□□□□ -1.88
VRK1-205ENST00000555402 OR6N1Q8NGY5 312 aa3.29□□□□□ -1.88
VRK1-205ENST00000555402 OR52P1PQ8NH57 321 aa3.29□□□□□ -1.88
VRK1-205ENST00000555402 BAALCQ8WXS3 180 aa3.29□□□□□ -1.88
VRK1-205ENST00000555402 CACNG8Q8WXS5 425 aa3.29□□□□□ -1.88
VRK1-205ENST00000555402 NARS2Q96I59 477 aaKnown RBP3.29□□□□□ -1.88
VRK1-205ENST00000555402 RAB1BQ9H0U4 201 aa3.29□□□□□ -1.88
VRK1-205ENST00000555402 FBXO8Q9NRD0 319 aa3.29□□□□□ -1.88
VRK1-205ENST00000555402 GGA2Q9UJY4 613 aa3.29□□□□□ -1.88
VRK1-205ENST00000555402 RBMX2Q9Y388 322 aaKnown RBP3.29□□□□□ -1.88
VRK1-205ENST00000555402 ZNF705GA8MUZ8 300 aaPredicted RBP3.28□□□□□ -1.88
VRK1-205ENST00000555402 KRBOX1C9JBD0 128 aa3.28□□□□□ -1.88
VRK1-205ENST00000555402 BPY2O14599 106 aa3.28□□□□□ -1.88
VRK1-205ENST00000555402 ZNF324O75467 553 aaPredicted RBP3.28□□□□□ -1.88
VRK1-205ENST00000555402 LCA5LO95447 670 aa3.28□□□□□ -1.88
VRK1-205ENST00000555402 HLA-DQA1P01909 254 aa3.28□□□□□ -1.88
VRK1-205ENST00000555402 DCNP07585 359 aaKnown RBP3.28□□□□□ -1.88
VRK1-205ENST00000555402 CD70P32970 193 aa3.28□□□□□ -1.88
VRK1-205ENST00000555402 CSKP41240 450 aa3.28□□□□□ -1.88
VRK1-205ENST00000555402 GFERP55789 205 aa3.28□□□□□ -1.88
VRK1-205ENST00000555402 OR2B8PP59922 312 aa3.28□□□□□ -1.88
VRK1-205ENST00000555402 PSMC5P62195 406 aa3.28□□□□□ -1.88
VRK1-205ENST00000555402 STX3Q13277 289 aa3.28□□□□□ -1.88
VRK1-205ENST00000555402 C18orf21Q32NC0 220 aaPredicted RBP3.28□□□□□ -1.88
VRK1-205ENST00000555402 CLEC6AQ6EIG7 209 aa3.28□□□□□ -1.88
VRK1-205ENST00000555402 COPS6Q7L5N1 327 aa3.28□□□□□ -1.88
VRK1-205ENST00000555402 SLC16A13Q7RTY0 426 aa3.28□□□□□ -1.88
VRK1-205ENST00000555402 MDP1Q86V88 176 aa3.28□□□□□ -1.88
VRK1-205ENST00000555402 ZNF695Q8IW36 515 aa3.28□□□□□ -1.88
VRK1-205ENST00000555402 SLC30A8Q8IWU4 369 aa3.28□□□□□ -1.88
VRK1-205ENST00000555402 SELENOHQ8IZQ5 122 aaKnown RBP3.28□□□□□ -1.88
VRK1-205ENST00000555402 TMEM256Q8N2U0 113 aa3.28□□□□□ -1.88
VRK1-205ENST00000555402 GATSQ8NAP1 163 aa3.28□□□□□ -1.88
VRK1-205ENST00000555402 C19orf18Q8NEA5 215 aa3.28□□□□□ -1.88
VRK1-205ENST00000555402 OR1J4Q8NGS1 313 aa3.28□□□□□ -1.88
VRK1-205ENST00000555402 FRZBQ92765 325 aa3.28□□□□□ -1.88
VRK1-205ENST00000555402 RBBP8Q99708 897 aa3.28□□□□□ -1.88
VRK1-205ENST00000555402 GGTLC1Q9BX51 225 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms