RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 GATA4P43694 442 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 GZMKP49863 264 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 CDH15P55291 814 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 SEC61A1P61619 476 aaKnown RBP10.38□□□□□ -0.75
SYNE2-214ENST00000554928 PRDX4Q13162 271 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 WDR38Q5JTN6 314 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 BCL2L15Q5TBC7 163 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 IL17RELQ6ZVW7 336 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 LHFPL3Q86UP9 236 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 CATSPERDQ86XM0 798 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 C11orf53Q8IXP5 236 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 ELMOD2Q8IZ81 293 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 DHRSXQ8N5I4 330 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 OR52I1Q8NGK6 324 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 RAB1CQ92928 201 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 ITPKCQ96DU7 683 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 PAPOLGQ9BWT3 736 aaKnown RBP10.38□□□□□ -0.75
SYNE2-214ENST00000554928 RGCCQ9H4X1 137 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 METTL17Q9H7H0 456 aaPredicted RBP10.38□□□□□ -0.75
SYNE2-214ENST00000554928 ZNF665Q9H7R5 613 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 RNPEPL1Q9HAU8 725 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 GNG8Q9UK08 70 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 DYSFO75923 2080 aa10.38□□□□□ -0.75
SYNE2-214ENST00000554928 HIVEP2P31629 2446 aa10.37□□□□□ -0.75
SYNE2-214ENST00000554928 SVEP1Q4LDE5 3571 aa10.37□□□□□ -0.75
SYNE2-214ENST00000554928 DAPL1A0PJW8 107 aa10.37□□□□□ -0.75
SYNE2-214ENST00000554928 ACOD1A6NK06 481 aa10.37□□□□□ -0.75
SYNE2-214ENST00000554928 MPZL2O60487 215 aa10.37□□□□□ -0.75
SYNE2-214ENST00000554928 GMDSO60547 372 aa10.37□□□□□ -0.75
SYNE2-214ENST00000554928 TGFAP01135 160 aa10.37□□□□□ -0.75
SYNE2-214ENST00000554928 IGHA1P01876 353 aa10.37□□□□□ -0.75
SYNE2-214ENST00000554928 FAHP16930 419 aa10.37□□□□□ -0.75
SYNE2-214ENST00000554928 EGR1P18146 543 aa10.37□□□□□ -0.75
SYNE2-214ENST00000554928 CFL1P23528 166 aaKnown RBP10.37□□□□□ -0.75
SYNE2-214ENST00000554928 CD80P33681 288 aa10.37□□□□□ -0.75
SYNE2-214ENST00000554928 CAPGP40121 348 aa10.37□□□□□ -0.75
SYNE2-214ENST00000554928 AQP4P55087 323 aa10.37□□□□□ -0.75
SYNE2-214ENST00000554928 NANOS3P60323 173 aaKnown RBP10.37□□□□□ -0.75
SYNE2-214ENST00000554928 BTG1P62324 171 aa10.37□□□□□ -0.75
SYNE2-214ENST00000554928 CDONQ4KMG0 1287 aa10.37□□□□□ -0.75
SYNE2-214ENST00000554928 COMMD2Q86X83 199 aa10.37□□□□□ -0.75
SYNE2-214ENST00000554928 RDH10Q8IZV5 341 aa10.37□□□□□ -0.75
SYNE2-214ENST00000554928 Q8TCH9 128 aa10.37□□□□□ -0.75
SYNE2-214ENST00000554928 PIGCQ92535 297 aa10.37□□□□□ -0.75
SYNE2-214ENST00000554928 HPS1Q92902 700 aa10.37□□□□□ -0.75
SYNE2-214ENST00000554928 TIMD4Q96H15 378 aa10.37□□□□□ -0.75
SYNE2-214ENST00000554928 GAL3ST1Q99999 423 aa10.37□□□□□ -0.75
SYNE2-214ENST00000554928 ISG20L2Q9H9L3 353 aaKnown RBP10.37□□□□□ -0.75
SYNE2-214ENST00000554928 C1orf123Q9NWV4 160 aa10.37□□□□□ -0.75
SYNE2-214ENST00000554928 UBAP1Q9NZ09 502 aa10.37□□□□□ -0.75
SYNE2-214ENST00000554928 SNX5Q9Y5X3 404 aa10.37□□□□□ -0.75
SYNE2-214ENST00000554928 MALRD1Q5VYJ5 2156 aa10.36□□□□□ -0.75
SYNE2-214ENST00000554928 A8MV72 311 aaPredicted RBP10.36□□□□□ -0.75
SYNE2-214ENST00000554928 E9PI62 339 aa10.36□□□□□ -0.75
SYNE2-214ENST00000554928 J3QLW9 94 aa10.36□□□□□ -0.75
SYNE2-214ENST00000554928 SULT1C4O75897 302 aa10.36□□□□□ -0.75
SYNE2-214ENST00000554928 CST4P01036 141 aa10.36□□□□□ -0.75
SYNE2-214ENST00000554928 ZNF19P17023 458 aa10.36□□□□□ -0.75
SYNE2-214ENST00000554928 ZNF154Q13106 437 aa10.36□□□□□ -0.75
SYNE2-214ENST00000554928 CEP78Q5JTW2 689 aa10.36□□□□□ -0.75
SYNE2-214ENST00000554928 TTC23Q5W5X9 447 aa10.36□□□□□ -0.75
SYNE2-214ENST00000554928 LRRC28Q86X40 367 aaPredicted RBP10.36□□□□□ -0.75
SYNE2-214ENST00000554928 ACBD7Q8N6N7 88 aa10.36□□□□□ -0.75
SYNE2-214ENST00000554928 CELF2-AS1Q8N7Q2 184 aa10.36□□□□□ -0.75
SYNE2-214ENST00000554928 BOLLQ8N9W6 283 aaKnown RBP10.36□□□□□ -0.75
SYNE2-214ENST00000554928 LINC01356Q8N9X3 169 aa10.36□□□□□ -0.75
SYNE2-214ENST00000554928 PLPP7Q8NBV4 271 aa10.36□□□□□ -0.75
SYNE2-214ENST00000554928 DEFB108BQ8NET1 73 aa10.36□□□□□ -0.75
SYNE2-214ENST00000554928 CSNK2A3Q8NEV1 391 aa10.36□□□□□ -0.75
SYNE2-214ENST00000554928 OR1M1Q8NGA1 313 aa10.36□□□□□ -0.75
SYNE2-214ENST00000554928 OR14K1Q8NGZ2 314 aa10.36□□□□□ -0.75
SYNE2-214ENST00000554928 OR8S1Q8NH09 359 aa10.36□□□□□ -0.75
SYNE2-214ENST00000554928 OR5P3Q8WZ94 311 aa10.36□□□□□ -0.75
SYNE2-214ENST00000554928 RPL3LQ92901 407 aaKnown RBP10.36□□□□□ -0.75
SYNE2-214ENST00000554928 SEH1LQ96EE3 360 aa10.36□□□□□ -0.75
SYNE2-214ENST00000554928 PELI1Q96FA3 418 aa10.36□□□□□ -0.75
SYNE2-214ENST00000554928 C4orf36Q96KX1 117 aa10.36□□□□□ -0.75
SYNE2-214ENST00000554928 Q96MT0 163 aa10.36□□□□□ -0.75
SYNE2-214ENST00000554928 ALG8Q9BVK2 526 aa10.36□□□□□ -0.75
SYNE2-214ENST00000554928 SLC22A4Q9H015 551 aa10.36□□□□□ -0.75
SYNE2-214ENST00000554928 TMEM165Q9HC07 324 aa10.36□□□□□ -0.75
SYNE2-214ENST00000554928 C8orf4Q9NR00 106 aa10.36□□□□□ -0.75
SYNE2-214ENST00000554928 MRPS18AQ9NVS2 196 aaKnown RBP10.36□□□□□ -0.75
SYNE2-214ENST00000554928 PIGLQ9Y2B2 252 aa10.36□□□□□ -0.75
SYNE2-214ENST00000554928 A6NLC8 198 aa10.35□□□□□ -0.75
SYNE2-214ENST00000554928 CEACAM18A8MTB9 384 aa10.35□□□□□ -0.75
SYNE2-214ENST00000554928 XPNPEP2O43895 674 aa10.35□□□□□ -0.75
SYNE2-214ENST00000554928 LIMS3P0CW19 117 aa10.35□□□□□ -0.75
SYNE2-214ENST00000554928 LIMS4P0CW20 117 aa10.35□□□□□ -0.75
SYNE2-214ENST00000554928 CCL1P22362 96 aa10.35□□□□□ -0.75
SYNE2-214ENST00000554928 ZFP36P26651 326 aaKnown RBP10.35□□□□□ -0.75
SYNE2-214ENST00000554928 MAP2K3P46734 347 aa10.35□□□□□ -0.75
SYNE2-214ENST00000554928 ACTC1P68032 377 aa10.35□□□□□ -0.75
SYNE2-214ENST00000554928 ACTA1P68133 377 aa10.35□□□□□ -0.75
SYNE2-214ENST00000554928 SLC3A1Q07837 685 aa10.35□□□□□ -0.75
SYNE2-214ENST00000554928 DOC2BQ14184 412 aa10.35□□□□□ -0.75
SYNE2-214ENST00000554928 ZNF181Q2M3W8 571 aa10.35□□□□□ -0.75
SYNE2-214ENST00000554928 SFRP4Q6FHJ7 346 aaPredicted RBP10.35□□□□□ -0.75
SYNE2-214ENST00000554928 FAM166AQ6J272 317 aa10.35□□□□□ -0.75
SYNE2-214ENST00000554928 LYPD2Q6UXB3 125 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms