RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 C4orf45Q96LM5 186 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 SAMD8Q96LT4 415 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 TSSK2Q96PF2 358 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 RBP7Q96R05 134 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 CCT8L2Q96SF2 557 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 DDOQ99489 341 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 COQ7Q99807 217 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 BTBD10Q9BSF8 475 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 OR2J1Q9GZK6 312 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 KCNN2Q9H2S1 579 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 OR52D1Q9H346 318 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 MAGIXQ9H6Y5 334 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 KRCC1Q9NPI7 259 aaPredicted RBP3.5□□□□□ -1.85
VTI1B-203ENST00000554636 ZNF275Q9NSD4 429 aaPredicted RBP3.5□□□□□ -1.85
VTI1B-203ENST00000554636 NDE1Q9NXR1 346 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 VNN3Q9NY84 501 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 SLCO1C1Q9NYB5 712 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 NKIRAS2Q9NYR9 191 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 ACTR3BQ9P1U1 418 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 EIF3KQ9UBQ5 218 aaKnown RBP3.5□□□□□ -1.85
VTI1B-203ENST00000554636 GRHPRQ9UBQ7 328 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 KCNS2Q9ULS6 477 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 TIMM10BQ9Y5J6 103 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 LYVE1Q9Y5Y7 322 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 CACNG2Q9Y698 323 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 CDH10Q9Y6N8 788 aa3.5□□□□□ -1.85
VTI1B-203ENST00000554636 DYSFO75923 2080 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 TNFRSF11BO00300 401 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 BHLHE40O14503 412 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 DYNC1I1O14576 645 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 RER1O15258 196 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 PPIHO43447 177 aaKnown RBP3.49□□□□□ -1.85
VTI1B-203ENST00000554636 SGCEO43556 437 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 SPRY3O43610 288 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 OR10H3O60404 316 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 RENP00797 406 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 IGHV1-46P01743 117 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 TFP02787 698 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 CD55P08174 381 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 PSKH1P11801 424 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 HIST1H1CP16403 213 aaKnown RBP3.49□□□□□ -1.85
VTI1B-203ENST00000554636 KITLGP21583 273 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 ANOS1P23352 680 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 SLC6A6P31641 620 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 GGT2P36268 569 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 IFNGR2P38484 337 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 CRYBB2P43320 205 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 ENTPD1P49961 510 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 DVL1P1P54792 670 aaPredicted RBP3.49□□□□□ -1.85
VTI1B-203ENST00000554636 SELENOVP59797 346 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 PCBD1P61457 104 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 LMO4P61968 165 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 MS4A2Q01362 244 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 COX10Q12887 443 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 TSPAN31Q12999 210 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 PSG7Q13046 419 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 TSTQ16762 297 aaKnown RBP3.49□□□□□ -1.85
VTI1B-203ENST00000554636 MEP1BQ16820 701 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 PCGF3Q3KNV8 242 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 ZNF718Q3SXZ3 478 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 FAM120AOSQ5T036 256 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 AVPI1Q5T686 147 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 C1orf94Q6P1W5 598 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 LEG1Q6P5S2 330 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 TMEM154Q6P9G4 183 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 DNM1P34Q6PK57 102 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 CFAP77Q6ZQR2 320 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 Q6ZR03 302 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 SLC16A12Q6ZSM3 486 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 RRM2BQ7LG56 351 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 RNF144BQ7Z419 303 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 PHC2Q8IXK0 858 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 C1orf174Q8IYL3 243 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 OR6V1Q8N148 313 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 ARHGAP24Q8N264 748 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 ATG16L2Q8NAA4 619 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 AQP11Q8NBQ7 271 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 CCDC197Q8NCU1 140 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 NPEPL1Q8NDH3 523 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 SDR9C7Q8NEX9 313 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 OR52E2Q8NGJ4 325 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 OR4Q3Q8NH05 313 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 OR4K13Q8NH42 304 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 OR1F12Q8NHA8 337 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 FAM110DQ8TAY7 271 aaPredicted RBP3.49□□□□□ -1.85
VTI1B-203ENST00000554636 GNPDA2Q8TDQ7 276 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 SLC7A6Q92536 515 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 MED30Q96HR3 178 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 ERMAPQ96PL5 475 aaPredicted RBP3.49□□□□□ -1.85
VTI1B-203ENST00000554636 NMNAT3Q96T66 252 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 PLA2G12AQ9BZM1 189 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 TRIM15Q9C019 465 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 MUC13Q9H3R2 512 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 FN3KQ9H479 309 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 NARFLQ9H6Q4 476 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 EGLN3Q9H6Z9 239 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 ELOVL3Q9HB03 270 aa3.49□□□□□ -1.85
VTI1B-203ENST00000554636 PNRC2Q9NPJ4 139 aaKnown RBP3.49□□□□□ -1.85
VTI1B-203ENST00000554636 LIN7CQ9NUP9 197 aaKnown RBP3.49□□□□□ -1.85
VTI1B-203ENST00000554636 MRPL22Q9NWU5 206 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms