RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 MBNL2Q5VZF2 373 aaKnown RBP9.39□□□□□ -0.91
PABPN1-203ENST00000553960 RAB12Q6IQ22 244 aa9.39□□□□□ -0.91
PABPN1-203ENST00000553960 TMEM200AQ86VY9 491 aa9.39□□□□□ -0.91
PABPN1-203ENST00000553960 LAX1Q8IWV1 398 aa9.39□□□□□ -0.91
PABPN1-203ENST00000553960 ZSCAN4Q8NAM6 433 aaPredicted RBP9.39□□□□□ -0.91
PABPN1-203ENST00000553960 PXT1Q8NFP0 134 aa9.39□□□□□ -0.91
PABPN1-203ENST00000553960 MUCL1Q96DR8 90 aa9.39□□□□□ -0.91
PABPN1-203ENST00000553960 MRPS24Q96EL2 167 aaKnown RBP9.39□□□□□ -0.91
PABPN1-203ENST00000553960 C1orf147Q96MC9 270 aaPredicted RBP9.39□□□□□ -0.91
PABPN1-203ENST00000553960 LIN7BQ9HAP6 207 aa9.39□□□□□ -0.91
PABPN1-203ENST00000553960 PLEKHA1Q9HB21 404 aa9.39□□□□□ -0.91
PABPN1-203ENST00000553960 TAS2R4Q9NYW5 299 aa9.39□□□□□ -0.91
PABPN1-203ENST00000553960 MRPL15Q9P015 296 aaKnown RBP9.39□□□□□ -0.91
PABPN1-203ENST00000553960 DAPK2Q9UIK4 370 aa9.39□□□□□ -0.91
PABPN1-203ENST00000553960 GTF2A1LQ9UNN4 478 aa9.39□□□□□ -0.91
PABPN1-203ENST00000553960 NBASA2RRP1 2371 aa9.39□□□□□ -0.91
PABPN1-203ENST00000553960 PRR14LQ5THK1 2151 aa9.39□□□□□ -0.91
PABPN1-203ENST00000553960 IGHV2OR16-5A0A0B4J2B6 119 aa9.38□□□□□ -0.91
PABPN1-203ENST00000553960 IQCF6A8MYZ5 107 aa9.38□□□□□ -0.91
PABPN1-203ENST00000553960 ZNHIT1O43257 154 aa9.38□□□□□ -0.91
PABPN1-203ENST00000553960 AKR7A2O43488 359 aa9.38□□□□□ -0.91
PABPN1-203ENST00000553960 GSTZ1O43708 216 aaPredicted RBP9.38□□□□□ -0.91
PABPN1-203ENST00000553960 GMDSO60547 372 aa9.38□□□□□ -0.91
PABPN1-203ENST00000553960 SMPD2O60906 423 aa9.38□□□□□ -0.91
PABPN1-203ENST00000553960 PTBP3O95758 552 aaKnown RBP9.38□□□□□ -0.91
PABPN1-203ENST00000553960 PTAFRP25105 342 aa9.38□□□□□ -0.91
PABPN1-203ENST00000553960 MAGEB1P43366 347 aa9.38□□□□□ -0.91
PABPN1-203ENST00000553960 MMP15P51511 669 aa9.38□□□□□ -0.91
PABPN1-203ENST00000553960 FUT6P51993 359 aa9.38□□□□□ -0.91
PABPN1-203ENST00000553960 NKX6-1P78426 367 aaPredicted RBP9.38□□□□□ -0.91
PABPN1-203ENST00000553960 SSBP1Q04837 148 aaKnown RBP9.38□□□□□ -0.91
PABPN1-203ENST00000553960 RAB11BQ15907 218 aa9.38□□□□□ -0.91
PABPN1-203ENST00000553960 ZNF79Q15937 498 aa9.38□□□□□ -0.91
PABPN1-203ENST00000553960 IDNKQ5T6J7 187 aa9.38□□□□□ -0.91
PABPN1-203ENST00000553960 PYHIN1Q6K0P9 492 aa9.38□□□□□ -0.91
PABPN1-203ENST00000553960 LHFPL2Q6ZUX7 228 aa9.38□□□□□ -0.91
PABPN1-203ENST00000553960 ZNF808Q8N4W9 903 aaPredicted RBP9.38□□□□□ -0.91
PABPN1-203ENST00000553960 FAM89BQ8N5H3 189 aa9.38□□□□□ -0.91
PABPN1-203ENST00000553960 NUP37Q8NFH4 326 aa9.38□□□□□ -0.91
PABPN1-203ENST00000553960 OR5A2Q8NGI9 324 aa9.38□□□□□ -0.91
PABPN1-203ENST00000553960 OR51A2Q8NGJ7 313 aa9.38□□□□□ -0.91
PABPN1-203ENST00000553960 SETD6Q8TBK2 473 aa9.38□□□□□ -0.91
PABPN1-203ENST00000553960 TRMT10AQ8TBZ6 339 aaKnown RBP9.38□□□□□ -0.91
PABPN1-203ENST00000553960 FAM3DQ96BQ1 224 aa9.38□□□□□ -0.91
PABPN1-203ENST00000553960 MARS2Q96GW9 593 aaKnown RBP9.38□□□□□ -0.91
PABPN1-203ENST00000553960 SDHCQ99643 169 aaPredicted RBP9.38□□□□□ -0.91
PABPN1-203ENST00000553960 SRRQ9GZT4 340 aa9.38□□□□□ -0.91
PABPN1-203ENST00000553960 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.38□□□□□ -0.91
PABPN1-203ENST00000553960 CGGBP1Q9UFW8 167 aaPredicted RBP9.38□□□□□ -0.91
PABPN1-203ENST00000553960 OR5V1Q9UGF6 321 aa9.38□□□□□ -0.91
PABPN1-203ENST00000553960 KCNN3Q9UGI6 736 aa9.38□□□□□ -0.91
PABPN1-203ENST00000553960 ZNF107Q9UII5 783 aaPredicted RBP9.38□□□□□ -0.91
PABPN1-203ENST00000553960 STARD10Q9Y365 291 aa9.38□□□□□ -0.91
PABPN1-203ENST00000553960 HEATR1Q9H583 2144 aaKnown RBP9.38□□□□□ -0.91
PABPN1-203ENST00000553960 PLCE1Q9P212 2302 aa9.38□□□□□ -0.91
PABPN1-203ENST00000553960 IGSF10Q6WRI0 2623 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 ANKHD1Q8IWZ3 2542 aaKnown RBP9.37□□□□□ -0.91
PABPN1-203ENST00000553960 IGHV1-18A0A0C4DH31 117 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 A0A1W2PPK0 400 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 OR5B21A6NL26 309 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 CD300LBA8K4G0 201 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 TMEM14DPA8MWL7 114 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 XRCC3O43542 346 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 ZNF780AO75290 641 aaPredicted RBP9.37□□□□□ -0.91
PABPN1-203ENST00000553960 CA11O75493 328 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 UPK1BO75841 260 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 NRASP01111 189 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 CECR9P0C854 216 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 ZNF250P15622 560 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 ELK1P19419 428 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 CCKARP32238 428 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 GLRXP35754 106 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 ZNF93P35789 620 aaPredicted RBP9.37□□□□□ -0.91
PABPN1-203ENST00000553960 TALDO1P37837 337 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 PMELP40967 661 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 ART1P52961 327 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 CAV3P56539 151 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 PITPNAQ00169 270 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 NAAAQ02083 359 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 GPR176Q14439 515 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 PPA1Q15181 289 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 KISS1Q15726 138 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 TAB1Q15750 504 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 UBE2V2Q15819 145 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 NHLRC3Q5JS37 347 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 C9orf135Q5VTT2 229 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 LIX1LQ8IVB5 337 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 ZNF101Q8IZC7 436 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 SPERTQ8NA61 448 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 MINDY2Q8NBR6 621 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 KCNG3Q8TAE7 436 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 SLC25A38Q96DW6 304 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 S100A16Q96FQ6 103 aaKnown RBP9.37□□□□□ -0.91
PABPN1-203ENST00000553960 LRRC46Q96FV0 321 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 DIRAS2Q96HU8 199 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 FAM71F1Q96KD3 344 aaPredicted RBP9.37□□□□□ -0.91
PABPN1-203ENST00000553960 SEBOXQ9HB31 216 aaPredicted RBP9.37□□□□□ -0.91
PABPN1-203ENST00000553960 CDH20Q9HBT6 801 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 NGBQ9NPG2 151 aa9.37□□□□□ -0.91
PABPN1-203ENST00000553960 BRD7Q9NPI1 651 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms