RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 POLR2HP52434 150 aaKnown RBP10.88□□□□□ -0.67
SHMT2-207ENST00000553837 DVL1P1P54792 670 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-207ENST00000553837 RPL27P61353 136 aaKnown RBP10.88□□□□□ -0.67
SHMT2-207ENST00000553837 HGFACQ04756 655 aa10.88□□□□□ -0.67
SHMT2-207ENST00000553837 EGR3Q06889 387 aa10.88□□□□□ -0.67
SHMT2-207ENST00000553837 RASGEF1BQ0VAM2 473 aa10.88□□□□□ -0.67
SHMT2-207ENST00000553837 C1orf140Q5VVS0 124 aa10.88□□□□□ -0.67
SHMT2-207ENST00000553837 ZNF585AQ6P3V2 769 aa10.88□□□□□ -0.67
SHMT2-207ENST00000553837 ADAMTS17Q8TE56 1095 aa10.88□□□□□ -0.67
SHMT2-207ENST00000553837 THAP3Q8WTV1 239 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-207ENST00000553837 METTL21AQ8WXB1 218 aa10.88□□□□□ -0.67
SHMT2-207ENST00000553837 SLAMF9Q96A28 289 aa10.88□□□□□ -0.67
SHMT2-207ENST00000553837 KIRREL1Q96J84 757 aa10.88□□□□□ -0.67
SHMT2-207ENST00000553837 C4orf45Q96LM5 186 aa10.88□□□□□ -0.67
SHMT2-207ENST00000553837 NECAB3Q96P71 396 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-207ENST00000553837 OR5B2Q96R09 309 aa10.88□□□□□ -0.67
SHMT2-207ENST00000553837 RNF126Q9BV68 326 aa10.88□□□□□ -0.67
SHMT2-207ENST00000553837 CST11Q9H112 138 aa10.88□□□□□ -0.67
SHMT2-207ENST00000553837 ELOVL3Q9HB03 270 aa10.88□□□□□ -0.67
SHMT2-207ENST00000553837 SLC22A13Q9Y226 551 aa10.88□□□□□ -0.67
SHMT2-207ENST00000553837 WDR87Q6ZQQ6 2873 aa10.88□□□□□ -0.67
SHMT2-207ENST00000553837 BTBD17A6NE02 478 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 PLPP3O14495 311 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 SLC16A7O60669 478 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 MPZL1O95297 269 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 DUS4LO95620 317 aaKnown RBP10.87□□□□□ -0.67
SHMT2-207ENST00000553837 FCGR3AP08637 254 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 LIPCP11150 499 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 RPS2P15880 293 aaKnown RBP10.87□□□□□ -0.67
SHMT2-207ENST00000553837 ZNF28P17035 718 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 CX3CR1P49238 355 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 FBXW4P57775 412 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 KRBOX4Q5JUW0 171 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 ANGPTL5Q86XS5 388 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 APCDD1LQ8NCL9 501 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 PLPP5Q8NEB5 264 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 NUBPLQ8TB37 319 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 STT3BQ8TCJ2 826 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 ZNF587Q96SQ5 575 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-207ENST00000553837 RSRP1Q9BUV0 290 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 MRPL37Q9BZE1 423 aaKnown RBP10.87□□□□□ -0.67
SHMT2-207ENST00000553837 KCNK15Q9H427 330 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 VSX1Q9NZR4 365 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-207ENST00000553837 DMDP11532 3685 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 A8MVM7 634 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 TSTD3H0UI37 97 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 XKRYO14609 159 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 HLA-DQA2P01906 255 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 HIST1H1BP16401 226 aaKnown RBP10.87□□□□□ -0.67
SHMT2-207ENST00000553837 MPZP25189 248 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 DDTP30046 118 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 CD80P33681 288 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 AFF3P51826 1226 aaKnown RBP10.87□□□□□ -0.67
SHMT2-207ENST00000553837 PKIAP61925 76 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 MFGE8Q08431 387 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-207ENST00000553837 SLC17A1Q14916 467 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 THEM4Q5T1C6 240 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 PAPD4Q6PIY7 484 aaKnown RBP10.87□□□□□ -0.67
SHMT2-207ENST00000553837 WDR74Q6RFH5 385 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-207ENST00000553837 DHRS11Q6UWP2 260 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 ZNF584Q8IVC4 421 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 CASTOR1Q8WTX7 329 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 C8orf44Q96CB5 159 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 MALSU1Q96EH3 234 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 AKR1E2Q96JD6 320 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 DCBLD2Q96PD2 775 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 OR8B4Q96RC9 309 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 TXNIPQ9H3M7 391 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 PISDQ9UG56 409 aa10.87□□□□□ -0.67
SHMT2-207ENST00000553837 A0A0A6YYH2 397 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 A6NJ64 397 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 MARCH11A6NNE9 402 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 FTCDNL1E5RQL4 147 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 K7ESF4 209 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 DOK2O60496 412 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 MT-ATP6P00846 226 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 CSN2P05814 226 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 FBXO45P0C2W1 286 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 ACKR3P25106 362 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 CRABP1P29762 137 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 SERPINF1P36955 418 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 AKR1C3P42330 323 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 ARRB1P49407 418 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-207ENST00000553837 RNASE10Q5GAN6 216 aaKnown RBP10.86□□□□□ -0.67
SHMT2-207ENST00000553837 FAM166AQ6J272 317 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 ETV3LQ6ZN32 361 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 GRINAQ7Z429 371 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 CD163Q86VB7 1156 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 SPEM1Q8N4L4 309 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 ZSCAN4Q8NAM6 433 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-207ENST00000553837 NFAM1Q8NET5 270 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-207ENST00000553837 TSEN15Q8WW01 171 aaKnown RBP10.86□□□□□ -0.67
SHMT2-207ENST00000553837 RRNAD1Q96FB5 475 aaKnown RBP10.86□□□□□ -0.67
SHMT2-207ENST00000553837 RHOVQ96L33 236 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 SPSB2Q99619 263 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 GPR61Q9BZJ8 451 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 MRPS17Q9Y2R5 130 aaKnown RBP10.86□□□□□ -0.67
SHMT2-207ENST00000553837 VPS13AQ96RL7 3174 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 EXPH5Q8NEV8 1989 aa10.86□□□□□ -0.67
SHMT2-207ENST00000553837 C7orf77A4D0Y5 90 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms