RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 MRPL15Q9P015 296 aaKnown RBP6.89□□□□□ -1.31
RDH11-205ENST00000553816 NKX1-2Q9UD57 310 aaPredicted RBP6.89□□□□□ -1.31
RDH11-205ENST00000553816 RHBDD3Q9Y3P4 386 aa6.89□□□□□ -1.31
RDH11-205ENST00000553816 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.88□□□□□ -1.319e-7■■■□□ 19
RDH11-205ENST00000553816 CSPG4Q6UVK1 2322 aa6.88□□□□□ -1.31
RDH11-205ENST00000553816 DOCK11Q5JSL3 2073 aa6.88□□□□□ -1.31
RDH11-205ENST00000553816 ISPDA4D126 451 aa6.88□□□□□ -1.31
RDH11-205ENST00000553816 SLC16A6O15403 523 aa6.88□□□□□ -1.31
RDH11-205ENST00000553816 FAM20BO75063 409 aa6.88□□□□□ -1.31
RDH11-205ENST00000553816 RPP14O95059 124 aaKnown RBP6.88□□□□□ -1.31
RDH11-205ENST00000553816 PTBP3O95758 552 aaKnown RBP6.88□□□□□ -1.31
RDH11-205ENST00000553816 APOC1P02654 83 aa6.88□□□□□ -1.31
RDH11-205ENST00000553816 DCTDP32321 178 aa6.88□□□□□ -1.31
RDH11-205ENST00000553816 SRP9P49458 86 aaKnown RBP6.88□□□□□ -1.31
RDH11-205ENST00000553816 SEC61A1P61619 476 aaKnown RBP6.88□□□□□ -1.31
RDH11-205ENST00000553816 ELF3P78545 371 aaPredicted RBP6.88□□□□□ -1.31
RDH11-205ENST00000553816 OR8G1Q15617 311 aa6.88□□□□□ -1.31
RDH11-205ENST00000553816 SLC25A30Q5SVS4 291 aa6.88□□□□□ -1.31
RDH11-205ENST00000553816 FAM166AQ6J272 317 aa6.88□□□□□ -1.31
RDH11-205ENST00000553816 DEGS2Q6QHC5 323 aa6.88□□□□□ -1.31
RDH11-205ENST00000553816 LRRC28Q86X40 367 aaPredicted RBP6.88□□□□□ -1.31
RDH11-205ENST00000553816 C11orf53Q8IXP5 236 aa6.88□□□□□ -1.31
RDH11-205ENST00000553816 OR10H4Q8NGA5 316 aa6.88□□□□□ -1.31
RDH11-205ENST00000553816 RHOXF1Q8NHV9 184 aa6.88□□□□□ -1.31
RDH11-205ENST00000553816 OR51E1Q8TCB6 317 aa6.88□□□□□ -1.31
RDH11-205ENST00000553816 TRUB1Q8WWH5 349 aaKnown RBP6.88□□□□□ -1.31
RDH11-205ENST00000553816 ASB17Q8WXJ9 295 aa6.88□□□□□ -1.31
RDH11-205ENST00000553816 RAB1CQ92928 201 aa6.88□□□□□ -1.31
RDH11-205ENST00000553816 RNFT2Q96EX2 444 aa6.88□□□□□ -1.31
RDH11-205ENST00000553816 OPA3Q9H6K4 179 aa6.88□□□□□ -1.31
RDH11-205ENST00000553816 METTL17Q9H7H0 456 aaPredicted RBP6.88□□□□□ -1.31
RDH11-205ENST00000553816 NIPAL2Q9H841 368 aa6.88□□□□□ -1.31
RDH11-205ENST00000553816 SP140LQ9H930 580 aa6.88□□□□□ -1.31
RDH11-205ENST00000553816 TMEM165Q9HC07 324 aa6.88□□□□□ -1.31
RDH11-205ENST00000553816 UBAP1Q9NZ09 502 aa6.88□□□□□ -1.31
RDH11-205ENST00000553816 NUFIP1Q9UHK0 495 aaKnown RBP6.88□□□□□ -1.31
RDH11-205ENST00000553816 SLC22A13Q9Y226 551 aa6.88□□□□□ -1.31
RDH11-205ENST00000553816 TMEM14AQ9Y6G1 99 aa6.88□□□□□ -1.31
RDH11-205ENST00000553816 A0A0U1RQV5 110 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 A0A1B0GTI1 187 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 A6NHS1 94 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 A6NIN4 97 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 ZNF850A8MQ14 1090 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 KIAA1324LA8MWY0 1029 aaPredicted RBP6.87□□□□□ -1.31
RDH11-205ENST00000553816 LOC110117498-PIK3R3F6TDL0 507 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 H3BSH0 61 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 PLPP2O43688 288 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 GMDSO60547 372 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 ZNF254O75437 659 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 WBP4O75554 376 aaKnown RBP6.87□□□□□ -1.31
RDH11-205ENST00000553816 GRPP07492 148 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 OR2T7P0C7T2 308 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 EGR1P18146 543 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 THBS2P35442 1172 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 DDOSTP39656 456 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 PSMB10P40306 273 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 MTNR1AP48039 350 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 ISL1P61371 349 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 BTG1P62324 171 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 CSNK2BP67870 215 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 ADARB1P78563 741 aaKnown RBP6.87□□□□□ -1.31
RDH11-205ENST00000553816 ZNF91Q05481 1191 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 EGR3Q06889 387 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 SLC3A1Q07837 685 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 PRDX4Q13162 271 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 TMED1Q13445 227 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 SMN1Q16637 294 aaKnown RBP6.87□□□□□ -1.31
RDH11-205ENST00000553816 ZNF181Q2M3W8 571 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 CR1LQ2VPA4 569 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 TP53I3Q53FA7 332 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 FAM120AOSQ5T036 256 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 OGFRL1Q5TC84 451 aaPredicted RBP6.87□□□□□ -1.31
RDH11-205ENST00000553816 LIPNQ5VXI9 398 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 PRSS35Q8N3Z0 413 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 CELF2-AS1Q8N7Q2 184 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 YIPF7Q8N8F6 280 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 OR2T27Q8NH04 317 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 HPSE2Q8WWQ2 592 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 PIGCQ92535 297 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 RORBQ92753 470 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 RFKQ969G6 155 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 LGALS12Q96DT0 336 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 TIMD4Q96H15 378 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 FAM71F1Q96KD3 344 aaPredicted RBP6.87□□□□□ -1.31
RDH11-205ENST00000553816 MNTQ99583 582 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 GAL3ST1Q99999 423 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 TMEM246Q9BRR3 403 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 ZNF649Q9BS31 505 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 SLC22A4Q9H015 551 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 GPR84Q9NQS5 396 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 SMPD3Q9NY59 655 aaPredicted RBP6.87□□□□□ -1.31
RDH11-205ENST00000553816 OR52A1Q9UKL2 312 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 KCNS2Q9ULS6 477 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.87□□□□□ -1.31
RDH11-205ENST00000553816 GTF2A1LQ9UNN4 478 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 EXOGQ9Y2C4 368 aaKnown RBP6.87□□□□□ -1.31
RDH11-205ENST00000553816 MYRFQ9Y2G1 1151 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 R4GMQ9 66 aa6.87□□□□□ -1.31
RDH11-205ENST00000553816 PPIAL4EA0A075B759 164 aa6.86□□□□□ -1.31
RDH11-205ENST00000553816 METTL15A6NJ78 407 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms