RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 RIDAP52758 137 aaKnown RBP19.87■□□□□ 0.77
TDP1-205ENST00000553527 BTG1P62324 171 aa19.87■□□□□ 0.77
TDP1-205ENST00000553527 ZNF85Q03923 595 aa19.87■□□□□ 0.77
TDP1-205ENST00000553527 TIGD6Q17RP2 521 aa19.87■□□□□ 0.77
TDP1-205ENST00000553527 C6orf141Q5SZD1 244 aa19.87■□□□□ 0.77
TDP1-205ENST00000553527 SIGLEC11Q96RL6 698 aa19.87■□□□□ 0.77
TDP1-205ENST00000553527 FGF20Q9NP95 211 aaPredicted RBP19.87■□□□□ 0.77
TDP1-205ENST00000553527 INPP5EQ9NRR6 644 aa19.87■□□□□ 0.77
TDP1-205ENST00000553527 PLCXD1Q9NUJ7 323 aa19.87■□□□□ 0.77
TDP1-205ENST00000553527 UFSP2Q9NUQ7 469 aa19.87■□□□□ 0.77
TDP1-205ENST00000553527 MYRFQ9Y2G1 1151 aa19.87■□□□□ 0.77
TDP1-205ENST00000553527 EFCAB10A6NFE3 127 aa19.86■□□□□ 0.77
TDP1-205ENST00000553527 SLC1A7O00341 560 aa19.86■□□□□ 0.77
TDP1-205ENST00000553527 XRCC2O43543 280 aa19.86■□□□□ 0.77
TDP1-205ENST00000553527 IGHA1P01876 353 aa19.86■□□□□ 0.77
TDP1-205ENST00000553527 PCMT1P22061 227 aa19.86■□□□□ 0.77
TDP1-205ENST00000553527 PSMA6P60900 246 aaKnown RBP19.86■□□□□ 0.77
TDP1-205ENST00000553527 MAB21L1Q13394 359 aa19.86■□□□□ 0.77
TDP1-205ENST00000553527 ZMYND11Q15326 602 aa19.86■□□□□ 0.77
TDP1-205ENST00000553527 PRAMEF6Q5VXH4 476 aa19.86■□□□□ 0.77
TDP1-205ENST00000553527 FAM220AQ7Z4H9 259 aa19.86■□□□□ 0.77
TDP1-205ENST00000553527 KLHL36Q8N4N3 616 aa19.86■□□□□ 0.77
TDP1-205ENST00000553527 OR56B2PQ8NGI1 322 aa19.86■□□□□ 0.77
TDP1-205ENST00000553527 SGK3Q96BR1 496 aa19.86■□□□□ 0.77
TDP1-205ENST00000553527 MRPL48Q96GC5 212 aaKnown RBP19.86■□□□□ 0.77
TDP1-205ENST00000553527 REEP6Q96HR9 211 aa19.86■□□□□ 0.77
TDP1-205ENST00000553527 PGAM5Q96HS1 289 aa19.86■□□□□ 0.77
TDP1-205ENST00000553527 MYCBPQ99417 103 aaPredicted RBP19.86■□□□□ 0.77
TDP1-205ENST00000553527 MDFIQ99750 246 aa19.86■□□□□ 0.77
TDP1-205ENST00000553527 CNOT2Q9NZN8 540 aaKnown RBP19.86■□□□□ 0.77
TDP1-205ENST00000553527 TRAV20A0A0B4J274 112 aa19.85■□□□□ 0.77
TDP1-205ENST00000553527 MAGEB4O15481 346 aaPredicted RBP19.85■□□□□ 0.77
TDP1-205ENST00000553527 PIPP12273 146 aaPredicted RBP19.85■□□□□ 0.77
TDP1-205ENST00000553527 CSNK2BP67870 215 aa19.85■□□□□ 0.77
TDP1-205ENST00000553527 LCN2P80188 198 aa19.85■□□□□ 0.77
TDP1-205ENST00000553527 PLEKHG7Q6ZR37 379 aa19.85■□□□□ 0.77
TDP1-205ENST00000553527 AHSA2Q719I0 299 aa19.85■□□□□ 0.77
TDP1-205ENST00000553527 LRRC28Q86X40 367 aaPredicted RBP19.85■□□□□ 0.77
TDP1-205ENST00000553527 YIPF7Q8N8F6 280 aa19.85■□□□□ 0.77
TDP1-205ENST00000553527 GGHQ92820 318 aa19.85■□□□□ 0.77
TDP1-205ENST00000553527 ADAT1Q9BUB4 502 aaKnown RBP19.85■□□□□ 0.77
TDP1-205ENST00000553527 SP140LQ9H930 580 aa19.85■□□□□ 0.77
TDP1-205ENST00000553527 SCN3BQ9NY72 215 aa19.85■□□□□ 0.77
TDP1-205ENST00000553527 ZNF319Q9P2F9 582 aa19.85■□□□□ 0.77
TDP1-205ENST00000553527 MRM2Q9UI43 246 aaKnown RBP19.85■□□□□ 0.77
TDP1-205ENST00000553527 PSORS1C1Q9UIG5 152 aa19.85■□□□□ 0.77
TDP1-205ENST00000553527 DOCK11Q5JSL3 2073 aa19.84■□□□□ 0.77
TDP1-205ENST00000553527 METTL15A6NJ78 407 aa19.84■□□□□ 0.77
TDP1-205ENST00000553527 DENRO43583 198 aaKnown RBP19.84■□□□□ 0.77
TDP1-205ENST00000553527 DCKP27707 260 aa19.84■□□□□ 0.77
TDP1-205ENST00000553527 PMELP40967 661 aa19.84■□□□□ 0.77
TDP1-205ENST00000553527 ACTA2P62736 377 aa19.84■□□□□ 0.77
TDP1-205ENST00000553527 ACTG2P63267 376 aa19.84■□□□□ 0.77
TDP1-205ENST00000553527 MPPED2Q15777 294 aa19.84■□□□□ 0.77
TDP1-205ENST00000553527 ZNF829Q3KNS6 432 aaPredicted RBP19.84■□□□□ 0.77
TDP1-205ENST00000553527 FAM201AQ5SY85 155 aa19.84■□□□□ 0.77
TDP1-205ENST00000553527 SPICQ8N5J4 248 aa19.84■□□□□ 0.77
TDP1-205ENST00000553527 TMEM80Q96HE8 168 aa19.84■□□□□ 0.77
TDP1-205ENST00000553527 ALG8Q9BVK2 526 aa19.84■□□□□ 0.77
TDP1-205ENST00000553527 OR10A2Q9H208 303 aa19.84■□□□□ 0.77
TDP1-205ENST00000553527 GNG8Q9UK08 70 aa19.84■□□□□ 0.77
TDP1-205ENST00000553527 A0A1B0GWJ7 208 aa19.83■□□□□ 0.77
TDP1-205ENST00000553527 LRRC30A6NM36 301 aa19.83■□□□□ 0.77
TDP1-205ENST00000553527 SULT1C4O75897 302 aa19.83■□□□□ 0.77
TDP1-205ENST00000553527 IRF2P14316 349 aa19.83■□□□□ 0.77
TDP1-205ENST00000553527 MYL12AP19105 171 aa19.83■□□□□ 0.77
TDP1-205ENST00000553527 DCTDP32321 178 aa19.83■□□□□ 0.77
TDP1-205ENST00000553527 FAM3AP98173 230 aa19.83■□□□□ 0.77
TDP1-205ENST00000553527 GALEQ14376 348 aa19.83■□□□□ 0.77
TDP1-205ENST00000553527 CDONQ4KMG0 1287 aa19.83■□□□□ 0.77
TDP1-205ENST00000553527 TP53I3Q53FA7 332 aa19.83■□□□□ 0.77
TDP1-205ENST00000553527 PRSS45Q7RTY3 260 aa19.83■□□□□ 0.77
TDP1-205ENST00000553527 LHFPL3Q86UP9 236 aa19.83■□□□□ 0.77
TDP1-205ENST00000553527 OR52H1Q8NGJ2 320 aa19.83■□□□□ 0.77
TDP1-205ENST00000553527 JAM3Q9BX67 310 aa19.83■□□□□ 0.77
TDP1-205ENST00000553527 SLC22A4Q9H015 551 aa19.83■□□□□ 0.77
TDP1-205ENST00000553527 OPA3Q9H6K4 179 aa19.83■□□□□ 0.77
TDP1-205ENST00000553527 ERVK13-1Q9NX77 482 aa19.83■□□□□ 0.77
TDP1-205ENST00000553527 DIMT1Q9UNQ2 313 aaKnown RBP19.83■□□□□ 0.77
TDP1-205ENST00000553527 ANKRD30BLA7E2S9 258 aa19.82■□□□□ 0.76
TDP1-205ENST00000553527 IFNL4K9M1U5 179 aa19.82■□□□□ 0.76
TDP1-205ENST00000553527 GMDSO60547 372 aa19.82■□□□□ 0.76
TDP1-205ENST00000553527 GRPP07492 148 aa19.82■□□□□ 0.76
TDP1-205ENST00000553527 MDH2P40926 338 aaKnown RBP19.82■□□□□ 0.76
TDP1-205ENST00000553527 CD200P41217 278 aa19.82■□□□□ 0.76
TDP1-205ENST00000553527 ST3GAL4Q11206 333 aa19.82■□□□□ 0.76
TDP1-205ENST00000553527 MED21Q13503 144 aa19.82■□□□□ 0.76
TDP1-205ENST00000553527 ZNF684Q5T5D7 378 aa19.82■□□□□ 0.76
TDP1-205ENST00000553527 STX19Q8N4C7 294 aa19.82■□□□□ 0.76
TDP1-205ENST00000553527 BOLLQ8N9W6 283 aaKnown RBP19.82■□□□□ 0.76
TDP1-205ENST00000553527 C19orf18Q8NEA5 215 aa19.82■□□□□ 0.76
TDP1-205ENST00000553527 OR11L1Q8NGX0 322 aa19.82■□□□□ 0.76
TDP1-205ENST00000553527 SPSB4Q96A44 273 aa19.82■□□□□ 0.76
TDP1-205ENST00000553527 PATZ1Q9HBE1 687 aaKnown RBP19.82■□□□□ 0.76
TDP1-205ENST00000553527 MRPL15Q9P015 296 aaKnown RBP19.82■□□□□ 0.76
TDP1-205ENST00000553527 EXOSC1Q9Y3B2 195 aaKnown RBP19.82■□□□□ 0.76
TDP1-205ENST00000553527 NOP16Q9Y3C1 178 aaKnown RBP19.82■□□□□ 0.76
TDP1-205ENST00000553527 TPRKBQ9Y3C4 175 aa19.82■□□□□ 0.76
TDP1-205ENST00000553527 PCDHGB5Q9Y5G0 923 aa19.82■□□□□ 0.76
TDP1-205ENST00000553527 FBN1P35555 2871 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms