RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 RNF7Q9UBF6 113 aa16.1■□□□□ 0.17
PTCH1-227ENST00000553256 NUFIP1Q9UHK0 495 aaKnown RBP16.1■□□□□ 0.17
PTCH1-227ENST00000553256 A0A0G2JMP0 313 aa16.09■□□□□ 0.17
PTCH1-227ENST00000553256 A0A0X1KG70 313 aa16.09■□□□□ 0.17
PTCH1-227ENST00000553256 TMEM269A0A1B0GVZ9 245 aa16.09■□□□□ 0.17
PTCH1-227ENST00000553256 LRRC30A6NM36 301 aa16.09■□□□□ 0.17
PTCH1-227ENST00000553256 EGR1P18146 543 aa16.09■□□□□ 0.17
PTCH1-227ENST00000553256 CFHR2P36980 270 aa16.09■□□□□ 0.17
PTCH1-227ENST00000553256 CXCR4P61073 352 aa16.09■□□□□ 0.17
PTCH1-227ENST00000553256 ISL1P61371 349 aa16.09■□□□□ 0.17
PTCH1-227ENST00000553256 EGR3Q06889 387 aa16.09■□□□□ 0.17
PTCH1-227ENST00000553256 FAHD2BQ6P2I3 314 aaPredicted RBP16.09■□□□□ 0.17
PTCH1-227ENST00000553256 C1QL2Q7Z5L3 287 aa16.09■□□□□ 0.17
PTCH1-227ENST00000553256 C1orf87Q8N0U7 546 aa16.09■□□□□ 0.17
PTCH1-227ENST00000553256 GALNT4Q8N4A0 578 aa16.09■□□□□ 0.17
PTCH1-227ENST00000553256 C19orf18Q8NEA5 215 aa16.09■□□□□ 0.17
PTCH1-227ENST00000553256 OR1M1Q8NGA1 313 aa16.09■□□□□ 0.17
PTCH1-227ENST00000553256 OR4M2Q8NGB6 313 aa16.09■□□□□ 0.17
PTCH1-227ENST00000553256 TRUB1Q8WWH5 349 aaKnown RBP16.09■□□□□ 0.17
PTCH1-227ENST00000553256 ITFG2Q969R8 447 aa16.09■□□□□ 0.17
PTCH1-227ENST00000553256 FAHD2AQ96GK7 314 aa16.09■□□□□ 0.17
PTCH1-227ENST00000553256 APOL4Q9BPW4 351 aa16.09■□□□□ 0.17
PTCH1-227ENST00000553256 TTTY10Q9BZA0 68 aa16.09■□□□□ 0.17
PTCH1-227ENST00000553256 PBOV1Q9GZY1 135 aa16.09■□□□□ 0.17
PTCH1-227ENST00000553256 FN3KRPQ9HA64 309 aa16.09■□□□□ 0.17
PTCH1-227ENST00000553256 CTSZQ9UBR2 303 aa16.09■□□□□ 0.17
PTCH1-227ENST00000553256 LRCH1Q9Y2L9 728 aa16.09■□□□□ 0.17
PTCH1-227ENST00000553256 INSIG2Q9Y5U4 225 aa16.09■□□□□ 0.17
PTCH1-227ENST00000553256 LOC105371242A0A075B767 164 aa16.08■□□□□ 0.16
PTCH1-227ENST00000553256 A0A1B0GTI1 187 aa16.08■□□□□ 0.16
PTCH1-227ENST00000553256 ANKRD30BLA7E2S9 258 aa16.08■□□□□ 0.16
PTCH1-227ENST00000553256 DLGAP1O14490 977 aa16.08■□□□□ 0.16
PTCH1-227ENST00000553256 TTRP02766 147 aa16.08■□□□□ 0.16
PTCH1-227ENST00000553256 SNRPGP62308 76 aaKnown RBP16.08■□□□□ 0.16
PTCH1-227ENST00000553256 TMED1Q13445 227 aa16.08■□□□□ 0.16
PTCH1-227ENST00000553256 GFOD2Q3B7J2 385 aa16.08■□□□□ 0.16
PTCH1-227ENST00000553256 TEX36Q5VZQ5 186 aa16.08■□□□□ 0.16
PTCH1-227ENST00000553256 DCDC5Q6ZRR9 648 aa16.08■□□□□ 0.16
PTCH1-227ENST00000553256 PQLC1Q8N2U9 271 aa16.08■□□□□ 0.16
PTCH1-227ENST00000553256 OR51G2Q8NGK0 314 aa16.08■□□□□ 0.16
PTCH1-227ENST00000553256 OR5P3Q8WZ94 311 aa16.08■□□□□ 0.16
PTCH1-227ENST00000553256 METTL17Q9H7H0 456 aaPredicted RBP16.08■□□□□ 0.16
PTCH1-227ENST00000553256 C1orf123Q9NWV4 160 aa16.08■□□□□ 0.16
PTCH1-227ENST00000553256 MIOXQ9UGB7 285 aa16.08■□□□□ 0.16
PTCH1-227ENST00000553256 MPC1Q9Y5U8 109 aa16.08■□□□□ 0.16
PTCH1-227ENST00000553256 A0A1W2PQL4 384 aaPredicted RBP16.07■□□□□ 0.16
PTCH1-227ENST00000553256 LGALS8O00214 317 aa16.07■□□□□ 0.16
PTCH1-227ENST00000553256 PHYHO14832 338 aa16.07■□□□□ 0.16
PTCH1-227ENST00000553256 RIDAP52758 137 aaKnown RBP16.07■□□□□ 0.16
PTCH1-227ENST00000553256 CSNK2BP67870 215 aa16.07■□□□□ 0.16
PTCH1-227ENST00000553256 PAX8Q06710 450 aa16.07■□□□□ 0.16
PTCH1-227ENST00000553256 KRTAP24-1Q3LI83 254 aa16.07■□□□□ 0.16
PTCH1-227ENST00000553256 DCAF12L2Q5VW00 463 aa16.07■□□□□ 0.16
PTCH1-227ENST00000553256 WDR82Q6UXN9 313 aa16.07■□□□□ 0.16
PTCH1-227ENST00000553256 OR11L1Q8NGX0 322 aa16.07■□□□□ 0.16
PTCH1-227ENST00000553256 RNPEPL1Q9HAU8 725 aa16.07■□□□□ 0.16
PTCH1-227ENST00000553256 C14orf119Q9NWQ9 140 aa16.07■□□□□ 0.16
PTCH1-227ENST00000553256 H2AFY2Q9P0M6 372 aaPredicted RBP16.07■□□□□ 0.16
PTCH1-227ENST00000553256 PCDHB10Q9UN67 800 aa16.07■□□□□ 0.16
PTCH1-227ENST00000553256 R4GMQ9 66 aa16.07■□□□□ 0.16
PTCH1-227ENST00000553256 ENTPD6O75354 484 aa16.06■□□□□ 0.16
PTCH1-227ENST00000553256 GRPP07492 148 aa16.06■□□□□ 0.16
PTCH1-227ENST00000553256 OR2T7P0C7T2 308 aa16.06■□□□□ 0.16
PTCH1-227ENST00000553256 AMY2BP19961 511 aa16.06■□□□□ 0.16
PTCH1-227ENST00000553256 SRSF2Q01130 221 aaKnown RBP16.06■□□□□ 0.16
PTCH1-227ENST00000553256 ZNF85Q03923 595 aa16.06■□□□□ 0.16
PTCH1-227ENST00000553256 PRDX4Q13162 271 aa16.06■□□□□ 0.16
PTCH1-227ENST00000553256 OCLNQ16625 522 aa16.06■□□□□ 0.16
PTCH1-227ENST00000553256 ZIK1Q3SY52 487 aaPredicted RBP16.06■□□□□ 0.16
PTCH1-227ENST00000553256 KLF17Q5JT82 389 aaPredicted RBP16.06■□□□□ 0.16
PTCH1-227ENST00000553256 TMEM42Q69YG0 159 aa16.06■□□□□ 0.16
PTCH1-227ENST00000553256 PLEKHG7Q6ZR37 379 aa16.06■□□□□ 0.16
PTCH1-227ENST00000553256 FAM90A1Q86YD7 464 aa16.06■□□□□ 0.16
PTCH1-227ENST00000553256 ELMOD2Q8IZ81 293 aa16.06■□□□□ 0.16
PTCH1-227ENST00000553256 OR2T27Q8NH04 317 aa16.06■□□□□ 0.16
PTCH1-227ENST00000553256 OR51E1Q8TCB6 317 aa16.06■□□□□ 0.16
PTCH1-227ENST00000553256 NEIL1Q96FI4 390 aaPredicted RBP16.06■□□□□ 0.16
PTCH1-227ENST00000553256 GPR84Q9NQS5 396 aa16.06■□□□□ 0.16
PTCH1-227ENST00000553256 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.05■□□□□ 0.16
PTCH1-227ENST00000553256 ZNF850A8MQ14 1090 aa16.05■□□□□ 0.16
PTCH1-227ENST00000553256 APOL3O95236 402 aa16.05■□□□□ 0.16
PTCH1-227ENST00000553256 ATP6V1B1P15313 513 aa16.05■□□□□ 0.16
PTCH1-227ENST00000553256 RPS2P15880 293 aaKnown RBP16.05■□□□□ 0.16
PTCH1-227ENST00000553256 ADRA2CP18825 462 aa16.05■□□□□ 0.16
PTCH1-227ENST00000553256 CCL1P22362 96 aa16.05■□□□□ 0.16
PTCH1-227ENST00000553256 CD80P33681 288 aa16.05■□□□□ 0.16
PTCH1-227ENST00000553256 CDC42P60953 191 aa16.05■□□□□ 0.16
PTCH1-227ENST00000553256 MZT1Q08AG7 82 aa16.05■□□□□ 0.16
PTCH1-227ENST00000553256 POU4F2Q12837 409 aa16.05■□□□□ 0.16
PTCH1-227ENST00000553256 SNCBQ16143 134 aa16.05■□□□□ 0.16
PTCH1-227ENST00000553256 ZNF829Q3KNS6 432 aaPredicted RBP16.05■□□□□ 0.16
PTCH1-227ENST00000553256 WDR25Q64LD2 544 aaPredicted RBP16.05■□□□□ 0.16
PTCH1-227ENST00000553256 PHC2Q8IXK0 858 aa16.05■□□□□ 0.16
PTCH1-227ENST00000553256 C10orf67Q8IYJ2 551 aa16.05■□□□□ 0.16
PTCH1-227ENST00000553256 FAM81AQ8TBF8 368 aa16.05■□□□□ 0.16
PTCH1-227ENST00000553256 RAB3IPQ96QF0 476 aaPredicted RBP16.05■□□□□ 0.16
PTCH1-227ENST00000553256 PAPOLGQ9BWT3 736 aaKnown RBP16.05■□□□□ 0.16
PTCH1-227ENST00000553256 SSBP3Q9BWW4 388 aaPredicted RBP16.05■□□□□ 0.16
PTCH1-227ENST00000553256 C7orf69Q9H7B7 122 aa16.05■□□□□ 0.16
PTCH1-227ENST00000553256 OOEPA6NGQ2 149 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms