RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 M0R1W7 72 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 NDUFB3O43676 98 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 SNX3O60493 162 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 HNRNPCL1O60812 293 aaKnown RBP4.13□□□□□ -1.75
CKAP4-203ENST00000553039 SERPINI2O75830 405 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 DCTN3O75935 186 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 MT-ATP6P00846 226 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 IGHG1P01857 330 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 HIST1H2ABP04908 130 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 ADORA3P0DMS8 318 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 NR2C1P13056 603 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 POU1F1P28069 291 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 DUSP1P28562 367 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 CHI3L1P36222 383 aaPredicted RBP4.13□□□□□ -1.75
CKAP4-203ENST00000553039 HTR5AP47898 357 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 INSL3P51460 131 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 BMXP51813 675 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 BLCAPP62952 87 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 MRPS34P82930 218 aaKnown RBP4.13□□□□□ -1.75
CKAP4-203ENST00000553039 STX3Q13277 289 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 LIN52Q52LA3 116 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 LRRC10Q5BKY1 277 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 TMEM255AQ5JRV8 349 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 FAM27D1Q5T7N8 215 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 ANXA8L1Q5VT79 327 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 TNFAIP8L2Q6P589 184 aaPredicted RBP4.13□□□□□ -1.75
CKAP4-203ENST00000553039 ULK3Q6PHR2 472 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 TRAT1Q6PIZ9 186 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 PET117Q6UWS5 81 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 GLDNQ6ZMI3 551 aaPredicted RBP4.13□□□□□ -1.75
CKAP4-203ENST00000553039 HIST3H2AQ7L7L0 130 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 HDDC2Q7Z4H3 204 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 C10orf107Q8IVU9 208 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 ARL6IP6Q8N6S5 226 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 CLDN22Q8N7P3 220 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 BOLLQ8N9W6 283 aaKnown RBP4.13□□□□□ -1.75
CKAP4-203ENST00000553039 OR5M8Q8NGP6 311 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 AKR7LQ8NHP1 331 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 MOSPD2Q8NHP6 518 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 PIFOQ8TCI5 191 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 RPS4Y2Q8TD47 263 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 CAPSLQ8WWF8 208 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 TNFRSF14Q92956 283 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 HIST1H2ACQ93077 130 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 SLC35B4Q969S0 331 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 MCHR2Q969V1 340 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 RASD2Q96D21 266 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 AKR1E2Q96JD6 320 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 ELOVL1Q9BW60 279 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 OR2H1Q9GZK4 316 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 SLC22A4Q9H015 551 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 SLCO1B3Q9NPD5 702 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 STX18Q9P2W9 335 aaKnown RBP4.13□□□□□ -1.75
CKAP4-203ENST00000553039 AURKCQ9UQB9 309 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 STARD10Q9Y365 291 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 IFT52Q9Y366 437 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 DNAH1Q9P2D7 4330 aa4.13□□□□□ -1.75
CKAP4-203ENST00000553039 A0A0G2JND7 137 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 IGHV3-64DA0A0J9YX35 117 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 PRSS51A0A1B0GVH4 220 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 A0A1W2PRV1 198 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 TMEM247A6NEH6 219 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 FAM90A8PA6NJQ4 464 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 MARCH11A6NNE9 402 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 C11orf98E9PRG8 122 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 F5H5P2 479 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 H0YAE9 185 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 RNF13O43567 381 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 CHST1O43916 411 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 SNNO75324 88 aaPredicted RBP4.12□□□□□ -1.75
CKAP4-203ENST00000553039 MBPP02686 304 aaPredicted RBP4.12□□□□□ -1.75
CKAP4-203ENST00000553039 GYPAP02724 150 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 ELANEP08246 267 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 HOXB5P09067 269 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 FRMD6-AS1P0C7T7 363 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 FAM90A13PP0C7W8 464 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 FAM90A24PP0C7X0 464 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 COX5BP10606 129 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 HOXB9P17482 250 aaPredicted RBP4.12□□□□□ -1.75
CKAP4-203ENST00000553039 FPR3P25089 353 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 SERPINB5P36952 375 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 SLC1A6P48664 564 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 MFAP4P55083 255 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 ABCE1P61221 599 aaKnown RBP4.12□□□□□ -1.75
CKAP4-203ENST00000553039 RPL38P63173 70 aaKnown RBP4.12□□□□□ -1.75
CKAP4-203ENST00000553039 MZT1Q08AG7 82 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 ECH1Q13011 328 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 SYPL1Q16563 259 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 MICBQ29980 383 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 CD300EQ496F6 205 aaPredicted RBP4.12□□□□□ -1.75
CKAP4-203ENST00000553039 CGB2Q6NT52 195 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 RBPMS2Q6ZRY4 209 aaKnown RBP4.12□□□□□ -1.75
CKAP4-203ENST00000553039 RFPL4BQ6ZWI9 263 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 SLC30A8Q8IWU4 369 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 KIRREL3Q8IZU9 778 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 OR5AS1Q8N127 324 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 TRIML2Q8N7C3 387 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 Q8N7P7 452 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 ANKFN1Q8N957 763 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 SETD9Q8NE22 299 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms