RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 ZNF573Q86YE8 665 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 KRTAP1-3Q8IUG1 177 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 ZDHHC23Q8IYP9 409 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 ZCCHC24Q8N2G6 241 aaKnown RBP8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 OR8B12Q8NGG6 310 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 OR52N1Q8NH53 320 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 OR2AE1Q8NHA4 323 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 ZNF671Q8TAW3 534 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 AMELYQ99218 206 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 TBX5Q99593 518 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 ANKRD60Q9BZ19 345 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 GCM1Q9NP62 436 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 GPR84Q9NQS5 396 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 ZNF275Q9NSD4 429 aaPredicted RBP8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 TMEM106BQ9NUM4 274 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 ERVK13-1Q9NX77 482 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 RNF7Q9UBF6 113 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 HHLA2Q9UM44 414 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 COPS3Q9UNS2 423 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 SLC22A13Q9Y226 551 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 NPTNQ9Y639 398 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 HIVEP1P15822 2718 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 HIVEP2P31629 2446 aa8.71□□□□□ -1.02
TRAFD1-208ENST00000552890 IGHV4-30-2A0A087WSY4 118 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 TRAV38-1A0A0B4J264 116 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 J3QLW9 94 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 MRPS14O60783 128 aaKnown RBP8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 RP2O75695 350 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 RPP14O95059 124 aaKnown RBP8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 CYB5AP00167 134 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 NRASP01111 189 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 ZNF19P17023 458 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 CCL1P22362 96 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 MYF6P23409 242 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 HCCSP53701 268 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 CEACAM21Q3KPI0 293 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 RNLSQ5VYX0 342 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 RPL22L1Q6P5R6 122 aaKnown RBP8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 CLEC9AQ6UXN8 241 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 Q6ZSR3 168 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 ZNF676Q8N7Q3 588 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 OR52I1Q8NGK6 324 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 OR5D14Q8NGL3 314 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 OR10Z1Q8NGY1 313 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 OR2G2Q8NGZ5 317 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 OR51E1Q8TCB6 317 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 FBLIM1Q8WUP2 373 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 ITLN1Q8WWA0 313 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 UBE2FQ969M7 185 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 C12orf43Q96C57 262 aaKnown RBP8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 YTHDF1Q9BYJ9 559 aaKnown RBP8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 BPESC1Q9GZL8 116 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 POFUT1Q9H488 388 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 TMEM160Q9NX00 188 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 LPAR3Q9UBY5 353 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 NKX1-2Q9UD57 310 aaPredicted RBP8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 MIOXQ9UGB7 285 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 PIGLQ9Y2B2 252 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 POLDIP2Q9Y2S7 368 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 KLHDC2Q9Y2U9 406 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 RRP15Q9Y3B9 282 aaKnown RBP8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 MED13LQ71F56 2210 aa8.7□□□□□ -1.02
TRAFD1-208ENST00000552890 ACANP16112 2415 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 MTORP42345 2549 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 LRP5LA4QPB2 252 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 TRIM64A6NGJ6 449 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 TRIM64BA6NI03 449 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 A6NLC8 198 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 TMEM178BH3BS89 294 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 PSMD9O00233 223 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 MYL12BO14950 172 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 GPR37O15354 613 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 CDC14BO60729 498 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 WBP4O75554 376 aaKnown RBP8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 NCR1O76036 304 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 IGLV3-1P01715 115 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 TTRP02766 147 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 PSKH1P11801 424 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 MUC1P15941 1255 aaPredicted RBP8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 ZNF20P17024 532 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 PRKACBP22694 351 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 COL8A2P25067 703 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 NPY4RP50391 375 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 BTG1P62324 171 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 BDH1Q02338 343 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 ZNF85Q03923 595 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 ST3GAL4Q11206 333 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 ALKBH1Q13686 389 aaKnown RBP8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 CNN3Q15417 329 aaKnown RBP8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 TMEM249Q2WGJ8 235 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 FAM76BQ5HYJ3 339 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 RBM48Q5RL73 367 aaKnown RBP8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 C6orf141Q5SZD1 244 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 FAM166AQ6J272 317 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 IZUMO2Q6UXV1 221 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 Q6ZR03 302 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 LRRC28Q86X40 367 aaPredicted RBP8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 LINC01356Q8N9X3 169 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 OR10AD1Q8NGE0 317 aa8.69□□□□□ -1.02
TRAFD1-208ENST00000552890 OR5AK2Q8NH90 309 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms