RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 TBX1O43435 398 aa11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 DIRAS1O95057 198 aa11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 SLC2A1P11166 492 aa11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 NCK1P16333 377 aa11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 ANOS1P23352 680 aa11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 PYCR1P32322 319 aa11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 GNALP38405 381 aa11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 IFNGR2P38484 337 aa11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 RPS27P42677 84 aaKnown RBP11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 TGM4P49221 684 aa11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 DLX1P56177 255 aa11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 CSNK2BP67870 215 aa11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 ELF3P78545 371 aaPredicted RBP11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 TIGD6Q17RP2 521 aa11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 STUMQ69YW2 141 aa11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 WDR86Q86TI4 376 aa11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 FTMTQ8N4E7 242 aa11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 OR51G2Q8NGK0 314 aa11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 OR2T4Q8NH00 348 aa11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 PPP1R35Q8TAP8 253 aa11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 SLAMF6Q96DU3 332 aa11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 MED30Q96HR3 178 aa11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 C7orf34Q96L11 122 aa11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 SSX3Q99909 188 aa11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 FUZQ9BT04 418 aa11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 TOR3AQ9H497 397 aa11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 SP140LQ9H930 580 aa11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 CENPMQ9NSP4 180 aa11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 HAO2Q9NYQ3 351 aa11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 SAMD4AQ9UPU9 718 aaKnown RBP11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 SF3B6Q9Y3B4 125 aaKnown RBP11.59□□□□□ -0.55
CHMP1A-210ENST00000551981 TVP23AA6NH52 213 aa11.58□□□□□ -0.56
CHMP1A-210ENST00000551981 CDIPTO14735 213 aa11.58□□□□□ -0.56
CHMP1A-210ENST00000551981 GMNNO75496 209 aa11.58□□□□□ -0.56
CHMP1A-210ENST00000551981 GADD45GO95257 159 aa11.58□□□□□ -0.56
CHMP1A-210ENST00000551981 SPARCP09486 303 aa11.58□□□□□ -0.56
CHMP1A-210ENST00000551981 VSIG10L2P0DP72 767 aa11.58□□□□□ -0.56
CHMP1A-210ENST00000551981 POU1F1P28069 291 aa11.58□□□□□ -0.56
CHMP1A-210ENST00000551981 SLC15A1P46059 708 aa11.58□□□□□ -0.56
CHMP1A-210ENST00000551981 SF3A3Q12874 501 aaKnown RBP eCLIP11.58□□□□□ -0.56
CHMP1A-210ENST00000551981 SNCBQ16143 134 aa11.58□□□□□ -0.56
CHMP1A-210ENST00000551981 LY6EQ16553 131 aa11.58□□□□□ -0.56
CHMP1A-210ENST00000551981 AANATQ16613 207 aa11.58□□□□□ -0.56
CHMP1A-210ENST00000551981 LRRC75BQ2VPJ9 315 aa11.58□□□□□ -0.56
CHMP1A-210ENST00000551981 SLC35F1Q5T1Q4 408 aa11.58□□□□□ -0.56
CHMP1A-210ENST00000551981 LIAT1Q6ZQX7 453 aa11.58□□□□□ -0.56
CHMP1A-210ENST00000551981 SLC16A9Q7RTY1 509 aa11.58□□□□□ -0.56
CHMP1A-210ENST00000551981 CYB561A3Q8NBI2 242 aa11.58□□□□□ -0.56
CHMP1A-210ENST00000551981 OR52L1Q8NGH7 329 aa11.58□□□□□ -0.56
CHMP1A-210ENST00000551981 OR5D13Q8NGL4 314 aa11.58□□□□□ -0.56
CHMP1A-210ENST00000551981 SEH1LQ96EE3 360 aa11.58□□□□□ -0.56
CHMP1A-210ENST00000551981 REEP6Q96HR9 211 aa11.58□□□□□ -0.56
CHMP1A-210ENST00000551981 MICU1Q9BPX6 476 aa11.58□□□□□ -0.56
CHMP1A-210ENST00000551981 NPFFR1Q9GZQ6 430 aa11.58□□□□□ -0.56
CHMP1A-210ENST00000551981 TLNRD1Q9H1K6 362 aa11.58□□□□□ -0.56
CHMP1A-210ENST00000551981 SLC25A10Q9UBX3 287 aaPredicted RBP11.58□□□□□ -0.56
CHMP1A-210ENST00000551981 RYR3Q15413 4870 aa11.58□□□□□ -0.56
CHMP1A-210ENST00000551981 ANXA2P2A6NMY6 339 aa11.57□□□□□ -0.56
CHMP1A-210ENST00000551981 ZNF878C9JN71 531 aa11.57□□□□□ -0.56
CHMP1A-210ENST00000551981 ANXA2P07355 339 aaKnown RBP11.57□□□□□ -0.56
CHMP1A-210ENST00000551981 COX4I1P13073 169 aa11.57□□□□□ -0.56
CHMP1A-210ENST00000551981 NDUFB7P17568 137 aa11.57□□□□□ -0.56
CHMP1A-210ENST00000551981 CFL1P23528 166 aaKnown RBP11.57□□□□□ -0.56
CHMP1A-210ENST00000551981 ENTPD1P49961 510 aa11.57□□□□□ -0.56
CHMP1A-210ENST00000551981 GMFBP60983 142 aa11.57□□□□□ -0.56
CHMP1A-210ENST00000551981 GRB2P62993 217 aaKnown RBP11.57□□□□□ -0.56
CHMP1A-210ENST00000551981 FAM3AP98173 230 aa11.57□□□□□ -0.56
CHMP1A-210ENST00000551981 IL5RAQ01344 420 aa11.57□□□□□ -0.56
CHMP1A-210ENST00000551981 SPIBQ01892 262 aa11.57□□□□□ -0.56
CHMP1A-210ENST00000551981 EMX1Q04741 257 aaPredicted RBP11.57□□□□□ -0.56
CHMP1A-210ENST00000551981 OXLD1Q5BKU9 147 aa11.57□□□□□ -0.56
CHMP1A-210ENST00000551981 CPLX4Q7Z7G2 160 aa11.57□□□□□ -0.56
CHMP1A-210ENST00000551981 CSNK2A3Q8NEV1 391 aa11.57□□□□□ -0.56
CHMP1A-210ENST00000551981 OR5T2Q8NGG2 359 aa11.57□□□□□ -0.56
CHMP1A-210ENST00000551981 OR10Z1Q8NGY1 313 aa11.57□□□□□ -0.56
CHMP1A-210ENST00000551981 RAB3IPQ96QF0 476 aaPredicted RBP11.57□□□□□ -0.56
CHMP1A-210ENST00000551981 RTL8AQ9BWD3 113 aa11.57□□□□□ -0.56
CHMP1A-210ENST00000551981 PAPOLGQ9BWT3 736 aaKnown RBP11.57□□□□□ -0.56
CHMP1A-210ENST00000551981 EFCAB1Q9HAE3 211 aa11.57□□□□□ -0.56
CHMP1A-210ENST00000551981 DCAF13Q9NV06 445 aaKnown RBP11.57□□□□□ -0.56
CHMP1A-210ENST00000551981 FGFR1OP2Q9NVK5 253 aa11.57□□□□□ -0.56
CHMP1A-210ENST00000551981 ZNF391Q9UJN7 358 aa11.57□□□□□ -0.56
CHMP1A-210ENST00000551981 COMMD3-BMI1R4GMX3 469 aa11.57□□□□□ -0.56
CHMP1A-210ENST00000551981 H0YAE9 185 aa11.56□□□□□ -0.56
CHMP1A-210ENST00000551981 ANGPTL7O43827 346 aa11.56□□□□□ -0.56
CHMP1A-210ENST00000551981 FBXO24O75426 580 aa11.56□□□□□ -0.56
CHMP1A-210ENST00000551981 APOC1P02654 83 aa11.56□□□□□ -0.56
CHMP1A-210ENST00000551981 SELLP14151 372 aa11.56□□□□□ -0.56
CHMP1A-210ENST00000551981 AMY2BP19961 511 aa11.56□□□□□ -0.56
CHMP1A-210ENST00000551981 HSD11B1P28845 292 aa11.56□□□□□ -0.56
CHMP1A-210ENST00000551981 FMO3P31513 532 aa11.56□□□□□ -0.56
CHMP1A-210ENST00000551981 CX3CR1P49238 355 aa11.56□□□□□ -0.56
CHMP1A-210ENST00000551981 CAV3P56539 151 aa11.56□□□□□ -0.56
CHMP1A-210ENST00000551981 NSUN5P1Q3KNT7 163 aa11.56□□□□□ -0.56
CHMP1A-210ENST00000551981 GLYATQ6IB77 296 aa11.56□□□□□ -0.56
CHMP1A-210ENST00000551981 RPL13AP3Q6NVV1 102 aa11.56□□□□□ -0.56
CHMP1A-210ENST00000551981 ZNF788Q6ZQV5 615 aa11.56□□□□□ -0.56
CHMP1A-210ENST00000551981 FAM86B1Q8N7N1 296 aa11.56□□□□□ -0.56
CHMP1A-210ENST00000551981 OR4F17Q8NGA8 305 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms