RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 RASL12Q9NYN1 266 aa14.23□□□□□ -0.13
RBFOX1-212ENST00000550418 ZNF230Q9UIE0 474 aaPredicted RBP14.23□□□□□ -0.13
RBFOX1-212ENST00000550418 LINC01553A4QN01 128 aa14.23□□□□□ -0.13
RBFOX1-212ENST00000550418 H0Y8G0 127 aa14.23□□□□□ -0.13
RBFOX1-212ENST00000550418 LY86O95711 162 aa14.23□□□□□ -0.13
RBFOX1-212ENST00000550418 DAOP14920 347 aa14.23□□□□□ -0.13
RBFOX1-212ENST00000550418 GDF1P27539 372 aa14.23□□□□□ -0.13
RBFOX1-212ENST00000550418 ACOT6Q3I5F7 207 aaPredicted RBP14.23□□□□□ -0.13
RBFOX1-212ENST00000550418 Q3ZCU0 254 aa14.23□□□□□ -0.13
RBFOX1-212ENST00000550418 TMEM240Q5SV17 173 aa14.23□□□□□ -0.13
RBFOX1-212ENST00000550418 LINC00518Q8N0U6 118 aa14.23□□□□□ -0.13
RBFOX1-212ENST00000550418 CA13Q8N1Q1 262 aa14.23□□□□□ -0.13
RBFOX1-212ENST00000550418 MAFAQ8NHW3 353 aaPredicted RBP14.23□□□□□ -0.13
RBFOX1-212ENST00000550418 PCDHGA9Q9Y5G4 932 aaKnown RBP14.23□□□□□ -0.13
RBFOX1-212ENST00000550418 HYAL3O43820 417 aaPredicted RBP14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 CLN5O75503 358 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 PNPP00491 289 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 EEF1A2Q05639 463 aaKnown RBP14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 TOMM20LQ6UXN7 152 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 ZNF813Q6ZN06 617 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 OR4D11Q8NGI4 311 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 SLC25A43Q8WUT9 341 aaPredicted RBP14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 VAMP8Q9BV40 100 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 PARD6AQ9NPB6 346 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 SLC52A3Q9NQ40 469 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 LPAR3Q9UBY5 353 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 RPH3ALQ9UNE2 315 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 A0A1B0GTH9 108 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 GATCO43716 136 aaKnown RBP14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 COX5AP20674 150 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 SP6Q3SY56 376 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 FAHD2BQ6P2I3 314 aaPredicted RBP14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 FAHD2AQ96GK7 314 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 CA10Q9NS85 328 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 SIRT3Q9NTG7 399 aaPredicted RBP14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 OR5K3A6NET4 321 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 CXCL2P19875 107 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 TPPP2P59282 170 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 KRTDAPP60985 99 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 BATF2Q8N1L9 274 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 SLC37A2Q8TED4 501 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 SHARPINQ9H0F6 387 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 M0R135 149 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 WISP3O95389 354 aaPredicted RBP14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 MPGP29372 298 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 NPBWR1P48145 328 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 FAM209BQ5JX69 171 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 Q6ZNB5 142 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 LILRB1Q8NHL6 650 aaPredicted RBP14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 SLC39A7Q92504 469 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 NTNG2Q96CW9 530 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 ZNF799Q96GE5 643 aa14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 LSM2Q9Y333 95 aaKnown RBP14.22□□□□□ -0.13
RBFOX1-212ENST00000550418 PCM1Q15154 2024 aa14.21□□□□□ -0.13
RBFOX1-212ENST00000550418 ELOA3CA0A087WX78 387 aaPredicted RBP14.21□□□□□ -0.13
RBFOX1-212ENST00000550418 TCAPO15273 167 aa14.21□□□□□ -0.13
RBFOX1-212ENST00000550418 MAML2Q8IZL2 1156 aaPredicted RBP14.21□□□□□ -0.13
RBFOX1-212ENST00000550418 AMER3Q8N944 861 aa14.21□□□□□ -0.13
RBFOX1-212ENST00000550418 OR10P1Q8NGE3 313 aa14.21□□□□□ -0.13
RBFOX1-212ENST00000550418 MRPS18AQ9NVS2 196 aaKnown RBP14.21□□□□□ -0.13
RBFOX1-212ENST00000550418 H3BP45 60 aa14.21□□□□□ -0.13
RBFOX1-212ENST00000550418 ZNF749O43361 778 aa14.21□□□□□ -0.13
RBFOX1-212ENST00000550418 WDR1O75083 606 aa14.21□□□□□ -0.13
RBFOX1-212ENST00000550418 CFDP00746 253 aaPredicted RBP14.21□□□□□ -0.13
RBFOX1-212ENST00000550418 OR8U8P0C7N1 319 aa14.21□□□□□ -0.13
RBFOX1-212ENST00000550418 IAPPP10997 89 aa14.21□□□□□ -0.13
RBFOX1-212ENST00000550418 GLRA1P23415 457 aa14.21□□□□□ -0.13
RBFOX1-212ENST00000550418 GSK3AP49840 483 aa14.21□□□□□ -0.13
RBFOX1-212ENST00000550418 ANKRD33Q7Z3H0 272 aa14.21□□□□□ -0.13
RBFOX1-212ENST00000550418 CATSPERDQ86XM0 798 aa14.21□□□□□ -0.13
RBFOX1-212ENST00000550418 OR52N4Q8NGI2 321 aa14.21□□□□□ -0.13
RBFOX1-212ENST00000550418 BAHD1Q8TBE0 780 aaPredicted RBP14.21□□□□□ -0.13
RBFOX1-212ENST00000550418 SLC35D1Q9NTN3 355 aa14.21□□□□□ -0.13
RBFOX1-212ENST00000550418 NPIPB8E9PQR5 432 aa14.21□□□□□ -0.13
RBFOX1-212ENST00000550418 PRKNO60260 465 aaPredicted RBP14.21□□□□□ -0.13
RBFOX1-212ENST00000550418 ADAP1O75689 374 aa14.21□□□□□ -0.13
RBFOX1-212ENST00000550418 NXPH2O95156 264 aa14.21□□□□□ -0.13
RBFOX1-212ENST00000550418 DHODHQ02127 395 aa14.21□□□□□ -0.13
RBFOX1-212ENST00000550418 COTL1Q14019 142 aa14.21□□□□□ -0.13
RBFOX1-212ENST00000550418 H2BFWTQ7Z2G1 175 aa14.21□□□□□ -0.13
RBFOX1-212ENST00000550418 OR2AE1Q8NHA4 323 aa14.21□□□□□ -0.13
RBFOX1-212ENST00000550418 PRAMEF25A6NGN4 478 aa14.21□□□□□ -0.14
RBFOX1-212ENST00000550418 SLC37A1P57057 533 aa14.21□□□□□ -0.14
RBFOX1-212ENST00000550418 LAIR1Q6GTX8 287 aa14.21□□□□□ -0.14
RBFOX1-212ENST00000550418 MMP25Q9NPA2 562 aa14.21□□□□□ -0.14
RBFOX1-212ENST00000550418 SRCAPQ6ZRS2 3230 aa14.2□□□□□ -0.14
RBFOX1-212ENST00000550418 MPPED1O15442 326 aa14.2□□□□□ -0.14
RBFOX1-212ENST00000550418 DTYMKP23919 212 aa14.2□□□□□ -0.14
RBFOX1-212ENST00000550418 TMEM33P57088 247 aa14.2□□□□□ -0.14
RBFOX1-212ENST00000550418 TIGITQ495A1 244 aa14.2□□□□□ -0.14
RBFOX1-212ENST00000550418 XKRY2A2RUG3 117 aa14.2□□□□□ -0.14
RBFOX1-212ENST00000550418 TLCD2A6NGC4 264 aa14.2□□□□□ -0.14
RBFOX1-212ENST00000550418 ICOSLGO75144 302 aa14.2□□□□□ -0.14
RBFOX1-212ENST00000550418 CST2P09228 141 aa14.2□□□□□ -0.14
RBFOX1-212ENST00000550418 HIST1H1DP16402 221 aaKnown RBP14.2□□□□□ -0.14
RBFOX1-212ENST00000550418 TCN2P20062 427 aa14.2□□□□□ -0.14
RBFOX1-212ENST00000550418 FOLR3P41439 243 aa14.2□□□□□ -0.14
RBFOX1-212ENST00000550418 LAIR2Q6ISS4 152 aa14.2□□□□□ -0.14
RBFOX1-212ENST00000550418 PSENENQ9NZ42 101 aa14.2□□□□□ -0.14
RBFOX1-212ENST00000550418 WNK3Q9BYP7 1800 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms