RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 OSBPL11Q9BXB4 747 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 SLC25A2Q9BXI2 301 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 PORCNQ9H237 461 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 WFDC1Q9HC57 220 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 ISYNA1Q9NPH2 558 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 MED4Q9NPJ6 270 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 OR2S2Q9NQN1 319 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 TREX1Q9NSU2 369 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 NRBP2Q9NSY0 501 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 STX18Q9P2W9 335 aaKnown RBP1.92□□□□□ -2.1
CCDC38-208ENST00000549876 DEC1Q9P2X7 70 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 UVRAGQ9P2Y5 699 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 MTFP1Q9UDX5 166 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 CD84Q9UIB8 345 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 CFL2Q9Y281 166 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 C15orf41Q9Y2V0 281 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 ACOT9Q9Y305 439 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 YTHDF2Q9Y5A9 579 aaKnown RBP1.92□□□□□ -2.1
CCDC38-208ENST00000549876 CAMTA1Q9Y6Y1 1673 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 DENND4AQ7Z401 1863 aa1.92□□□□□ -2.1
CCDC38-208ENST00000549876 CIB4A0PJX0 185 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 PLAC8L1A1L4L8 177 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 MGAT4DA6NG13 374 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 F8VP50 259 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 BET1O15155 118 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 ANGPTL7O43827 346 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 CTNSO60931 367 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 SCN2BO60939 215 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 RDH16O75452 317 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 E2F6O75461 281 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 SUPT3HO75486 399 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 CDK14O94921 469 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 CTDNEP1O95476 244 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 TTC4O95801 387 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 IGLV2-23P01705 113 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 FABP3P05413 133 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 CD3GP09693 182 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 THRAP10827 490 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 MYCNOSP40205 109 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 CYB561P49447 251 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 PRLHRP49683 370 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 P2RX1P51575 399 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 UBE2E1P51965 193 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 UBE2NP61088 152 aaKnown RBP1.91□□□□□ -2.1
CCDC38-208ENST00000549876 RPS23P62266 143 aaKnown RBP1.91□□□□□ -2.1
CCDC38-208ENST00000549876 VSNL1P62760 191 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 C2orf54Q08AI8 447 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 C2orf80Q0P641 193 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 RGNQ15493 299 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 TMEM183BQ1AE95 376 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 ZNF470Q6ECI4 717 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 OR2T5Q6IEZ7 315 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 ARL9Q6T311 187 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 RAB43Q86YS6 212 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 PCP2Q8IVA1 136 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 CD302Q8IX05 232 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 TMEM183AQ8IXX5 376 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 CA13Q8N1Q1 262 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 CDRT4Q8N9R6 151 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 OR10G4Q8NGN3 311 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 OR2T29Q8NH02 315 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 CCDC12Q8WUD4 166 aaPredicted RBP1.91□□□□□ -2.1
CCDC38-208ENST00000549876 TMEM234Q8WY98 164 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 DCPSQ96C86 337 aaKnown RBP1.91□□□□□ -2.1
CCDC38-208ENST00000549876 UBE2E2Q96LR5 201 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 CYTH2Q99418 400 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 TEAD3Q99594 435 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 TIMM29Q9BSF4 260 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 PLA2G12AQ9BZM1 189 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 OR51B5Q9H339 312 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 C1orf198Q9H425 327 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 RGS18Q9NS28 235 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 TRMT112Q9UI30 125 aaKnown RBP1.91□□□□□ -2.1
CCDC38-208ENST00000549876 MRM2Q9UI43 246 aaKnown RBP1.91□□□□□ -2.1
CCDC38-208ENST00000549876 ENPP5Q9UJA9 477 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 NXT1Q9UKK6 140 aaKnown RBP1.91□□□□□ -2.1
CCDC38-208ENST00000549876 PSG8Q9UQ74 426 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 ZNF257Q9Y2Q1 563 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 KLF12Q9Y4X4 402 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 FADS3Q9Y5Q0 445 aa1.91□□□□□ -2.1
CCDC38-208ENST00000549876 USP42Q9H9J4 1324 aaKnown RBP1.91□□□□□ -2.1
CCDC38-208ENST00000549876 CARMIL3Q8ND23 1372 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 TRAV8-7A0A075B6U6 113 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 IGHV3-74A0A0B4J1X5 117 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 IGHV2OR16-5A0A0B4J2B6 119 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 KIR2DS1A0A191URI9 304 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 TVP23AA6NH52 213 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 TRPC5OSA6NMA1 111 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 GOLGA8JA6NMD2 632 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 LINC01619G3V211 115 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 K7EN84 100 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 ZNF593O00488 134 aaPredicted RBP1.9□□□□□ -2.11
CCDC38-208ENST00000549876 PLPP3O14495 311 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 CALUO43852 315 aaPredicted RBP1.9□□□□□ -2.11
CCDC38-208ENST00000549876 RAD1O60671 282 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 CBR3O75828 277 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 UPK1BO75841 260 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 PTHP01270 115 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 CTSLP07711 333 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 OR5AL1P0C617 328 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms